Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG5G3940 | LG-5 | + | View | |
Aethionema arabicum | Aa31LG1G20380 | LG-1 | - | View | |
Acer truncatum | Atru.chr4.1929 | chr4 | + | View | |
Actinidia chinensis | Actinidia11369 | Lachesis_group21 | - | View | |
Actinidia chinensis | Actinidia39926 | Lachesis_group17 | - | View | |
Actinidia chinensis | Actinidia30134 | Lachesis_group24 | - | View | |
Actinidia chinensis | Actinidia37546 | Lachesis_group13 | - | View | |
Actinidia chinensis | Actinidia09521 | Lachesis_group15 | - | View | |
Arabidopsis lyrata | AL4G29020 | scaffold_4 | - | View | |
Avicennia marina | MSTRG.17522 | ScioBoG_19834_HRSCAF_19925 | - | View | |
Avicennia marina | MSTRG.9864 | ScioBoG_12795_HRSCAF_12848 | + | View | |
Amaranthus hybridus | Ah.04g155330 | AmaHy_arrow1_Scaffold_4 | - | View | |
Aquilegia oxysepala | Aqoxy2G03739 | CHR02 | - | View | |
Aquilegia oxysepala | Aqoxy5G00153 | CHR05 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.68RZIY | PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.06 | + | View |
Arabidopsis thaliana | AT1G04050 | histone-lysine N-methyltransferase SUVR2-like protein Encodes SUVR1%2C one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1%2C SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus%2C and a SUVR specific region preceding the SET domain. Localized to the nucleolus%2C maybe involved in regulation of rRNA expression. homolog of SU(var)3-9 1 (SUVR1)%3B FUNCTIONS IN: zinc ion binding%2C histone-lysine N-methyltransferase activity%3B INVOLVED IN: chromatin modification%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214)%2C WIYLD domain (InterPro:IPR018848)%2C Pre-SET zinc-binding sub-group (InterPro:IPR003606)%2C Pre-SET domain (InterPro:IPR007728)%3B BEST Arabidopsis thaliana protein match is: SET-domain containing protein lysine methyltransferase family protein (TAIR:AT5G43990.4)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr1 | - | View |
Arabidopsis thaliana | AT2G33370 | Ribosomal protein L14p/L23e family protein Ribosomal protein L14p/L23e family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: ribosome%2C cytosolic large ribosomal subunit%2C nucleolus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218)%2C Ribosomal protein L14 conserved site (InterPro:IPR019972)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT3G04400.1)%3B Has 9301 Blast hits to 9300 proteins in 3178 species: Archae - 321%3B Bacteria - 5427%3B Metazoa - 383%3B Fungi - 266%3B Plants - 815%3B Viruses - 0%3B Other Eukaryotes - 2089 (source: NCBI BLink). | Chr2 | - | View |
Amborella trichopoda | ATR0736G036 | AmTr_v1.0_scaffold00067 | + | View | |
Beta vulgaris | EL10Ac3g04950 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Chr3_EL10_PGA_scaffold7 | + | View |
Beta vulgaris | EL10Ac7g17671 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Chr7_EL10_PGA_scaffold5 | - | View |
Camellia sinensis var. sinensis | CSS0025855 | PREDICTED: histone-lysine N-methyltransferase SUVR2-like [Vitis vinifera] | Chr9 | + | View |
Cannabis sativa | CANSAT78G0907 | NC_044376.1 | + | View | |
Cicer arietinum L. | Ca_09651_v3 | Ca_LG4_v3 | + | View | |
Corylus avellana | Haze_24694 | Similar to SUVR2: Probable inactive histone-lysine N-methyltransferase SUVR2 (Arabidopsis thaliana OX%3D3702) | 8 | - | View |
Corylus avellana | Haze_11450 | Similar to RPL23: 60S ribosomal protein L23 (Nicotiana tabacum OX%3D4097) | 9 | - | View |
Coffea canephora | Cc03_g06120 | 60S ribosomal protein L23 | chr3 | - | View |
Coffea canephora | Cc01_g17860 | Putative uncharacterized protein | chr1 | + | View |
Citrus clementina | Ciclev10006177m.g | scaffold_9 | - | View | |
Citrus clementina | Ciclev10018896m.g | scaffold_3 | + | View | |
Cardamine hirsuta | CARHR127370 | 50S ribosomal protein L14 | Chr4 | - | View |
Carya illinoinensis | CiPaw.02G107700 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Chr02 | + | View |
Carya illinoinensis | CiPaw.03G269600 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Chr03 | + | View |
Carya illinoinensis | CiPaw.01G178900 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Chr01 | + | View |
Citrullus lanatus | ClCG06G007240 | 50S ribosomal protein L14 | CG_Chr06 | - | View |
Cucumis melo | MELO3C023039.2 | 50S ribosomal protein L14 | chr05 | - | View |
Cucumis melo | MELO3C012846.2 | 50S ribosomal protein L14 | chr04 | + | View |
Carica papaya | Cpa.g.sc44.9 | supercontig_44 | + | View | |
Carica papaya | Cpa.g.sc87.19 | supercontig_87 | - | View | |
Chenopodium quinoa | AUR62008786 | RPL23A: 60S ribosomal protein L23 | C_Quinoa_Scaffold_1710 | - | View |
Chenopodium quinoa | AUR62025452 | RPL23A: 60S ribosomal protein L23 | C_Quinoa_Scaffold_2773 | - | View |
Capsella rubella | Carub.0004s1499 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | scaffold_4 | - | View |
Cucumis sativus L. | CsaV3_2G012470 | Ribosomal protein | chr2 | + | View |
Daucus carota | DCAR_024288 | hypothetical protein | DCARv2_Chr7 | - | View |
Daucus carota | DCAR_027344 | hypothetical protein | DCARv2_Chr8 | + | View |
Davidia involucrata | Dinv29809 | GWHABJS00000016 | + | View | |
Davidia involucrata | Dinv27107 | GWHABJS00000014 | + | View | |
Davidia involucrata | Dinv34667 | GWHABJS00000010 | + | View | |
Davidia involucrata | Dinv16392 | GWHABJS00000007 | - | View | |
Durio zibethinus | Duzib138G1687 | NW_019167893.1 | - | View | |
Durio zibethinus | Duzib151G0967 | NW_019167904.1 | - | View | |
Durio zibethinus | Duzib212G0371 | NW_019168026.1 | + | View | |
Durio zibethinus | Duzib052G0410 | NW_019167849.1 | - | View | |
Erigeron canadensis | ECA248G0784 | Conyza_canadensis_scaffold:9 | - | View | |
Eucalyptus grandis | Eucgr.H02959 | Chr08 | + | View | |
Eucalyptus grandis | Eucgr.H00134 | Chr08 | + | View | |
Eucalyptus grandis | Eucgr.K01433 | Chr11 | + | View | |
Erythranthe guttata | Migut.D00469 | scaffold_4 | - | View | |
Erythranthe guttata | Migut.N00297 | scaffold_14 | - | View | |
Eutrema salsugineum | Thhalv10017398m.g | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | scaffold_10 | - | View |
Fragaria x ananassa | FAN15G3455 | PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | Fvb2-4 | + | View |
Fragaria x ananassa | FAN12G1474 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Fvb4-3 | - | View |
Fragaria x ananassa | FAN17G2334 | PTHR22884//PTHR22884:SF376 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | Fvb4-2 | + | View |
Fragaria x ananassa | FAN24G0471 | PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | Fvb2-2 | - | View |
Fragaria x ananassa | FAN22G0597 | PTHR11761//PTHR11761:SF10 - 50S/60S RIBOSOMAL PROTEIN L14/L23 // SUBFAMILY NOT NAMED | Fvb4-1 | - | View |
Fragaria x ananassa | FAN27G1521 | PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | Fvb2-1 | + | View |
Fragaria vesca | FvH4_4g04460 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Fvb4 | - | View |
Fragaria vesca | FvH4_2g20650 | PTHR22884//PTHR22884:SF376 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | Fvb2 | + | View |
Gossypium hirsutum | Gohir.A10G108900 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | A10 | + | View |
Gossypium hirsutum | Gohir.D09G228800 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | D09 | + | View |
Gossypium hirsutum | Gohir.A02G042400 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | A02 | - | View |
Gossypium hirsutum | Gohir.D10G158900 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | D10 | + | View |
Gossypium hirsutum | Gohir.D02G048000 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | D02 | - | View |
Gossypium hirsutum | Gohir.A09G227800 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | A09 | + | View |
Gossypium hirsutum | Gohir.A11G133100 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | A11 | - | View |
Glycine max | Glyma.10G134600 | PTHR11761//PTHR11761:SF10 - 50S/60S RIBOSOMAL PROTEIN L14/L23 // SUBFAMILY NOT NAMED | Gm10 | + | View |
Gossypium raimondii | Gorai.001G180900 | Chr01 | - | View | |
Gossypium raimondii | Gorai.006G251500 | Chr06 | + | View | |
Gossypium raimondii | Gorai.005G053300 | Chr05 | - | View | |
Gossypium raimondii | Gorai.011G178500 | Chr11 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0112F.1_g054660 | Hma1.2p1_0112F.1 | - | View | |
Lotus japonicus | Lj6g0013858 | PTHR11761//PTHR11761:SF10 - 50S/60S RIBOSOMAL PROTEIN L14/L23 // SUBFAMILY NOT NAMED | chr6 | + | View |
Lotus japonicus | Lj1g0018773 | PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | chr1 | + | View |
Lonicera japonica | Lj1C73G4 | GWHAAZE00000001 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_9_11361 | Lsat_1_v8_lg_9 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_6_68501 | Lsat_1_v8_lg_6 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_1_75680 | Lsat_1_v8_lg_1 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_5_183820 | Lsat_1_v8_lg_5 | + | View | |
Magnolia biondii | MBI07_g12936_MAGBIO | AED:0.14 | Chr07 | + | View |
Magnolia biondii | MBI10_g30715_MAGBIO | AED:0.31 | Chr10 | + | View |
Malus domestica | MD16G1225500 | Ribosomal protein L14p/L23e family protein | Chr16 | - | View |
Malus domestica | MD13G1220300 | Ribosomal protein L14p/L23e family protein | Chr13 | - | View |
Manihot esculenta | Manes.03G159800 | Chromosome03 | + | View | |
Manihot esculenta | Manes.15G045100 | Chromosome15 | - | View | |
Medicago truncatula | Medtr1g069570 | histone-lysine N-methyltransferase SUVR2-like protein | chr1 | + | View |
Nelumbo nucifera | Nn3g19763 | chr3 | - | View | |
Nicotiana tabacum | Nitab4.5_0001051g0070 | Ribosomal protein L14b/L23e, Ribosomal protein L14 domain | Nitab4.5_0001051 | + | View |
Olea europaea | Oeu059399.1 | scaffold810 | + | View | |
Olea europaea | Oeu002294.1 | chr1 | - | View | |
Petunia axillaris | Peaxi162Scf00043g02919 | Histone-lysine N-methyltransferase SUVR4 | Peaxi162Scf00043 | + | View |
Petunia axillaris | Peaxi162Scf00033g03016 | 60S ribosomal protein L23 | Peaxi162Scf00033 | - | View |
Punica granatum | PGR031G1287 | NC_045127.1 | + | View | |
Prunus persica | Prupe.8G216300 | PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | Pp08 | + | View |
Prunus persica | Prupe.1G047000 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Pp01 | - | View |
Populus trichocarpa | Potri.010G066400 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Chr10 | + | View |
Populus trichocarpa | Potri.008G171200 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | Chr08 | - | View |
Populus trichocarpa | Potri.002G257400 | PTHR22884//PTHR22884:SF337 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED | Chr02 | + | View |
Quercus lobata | QL06p020805 | 6 | - | View | |
Quercus lobata | QL09p041181 | 9 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr6g0286831 | RcHm_v2.0_Chr6 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr4g0395041 | RcHm_v2.0_Chr4 | - | View | |
Rhododendron simsii | Rhsim04G0173000 | chr04 | + | View | |
Rhododendron simsii | Rhsim02G0043300 | chr02 | - | View | |
Rhododendron simsii | Rhsim13G0039500 | chr13 | - | View | |
Striga asiatica | SGA_v2.0_scaffold67G22698 | scaffold67 | + | View | |
Striga asiatica | SGA_v2.0_scaffold31G12641 | scaffold31 | + | View | |
Salvia bowleyana | SalBow4G1342 | GWHASIU00000008 | + | View | |
Salvia bowleyana | SalBow3G0046 | GWHASIU00000006 | + | View | |
Salix brachista | Sabra02G0195800 | GWHAAZH00000002 | + | View | |
Simmondsia chinensis | Sc13g0006190 | GWHAASQ00000013 | - | View | |
Simmondsia chinensis | Sc25g0003570 | GWHAASQ00000025 | + | View | |
Sechium edule | Sed0014633 | LG04 | - | View | |
Sechium edule | Sed0013479 | LG09 | + | View | |
Sechium edule | Sed0015430 | LG05 | - | View | |
Solanum lycopersicum | Solyc09g090610.3 | Ribosomal protein L17 (AHRD V3.3 *** Q5I7K4_WHEAT) | SL4.0ch09 | - | View |
Schrenkiella parvula | Sp4g15680 | K02894 - large subunit ribosomal protein L23e (RP-L23e, RPL23) | ch4-6 | - | View |
Solanum pennellii | Sopen09g033550 | embryo defective 2171 (emb2171) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, embryo development ending in seed dormancy | LOCATED IN: ribosome, cytosolic large ribosomal subunit | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e , Ribosomal protein L14 conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein ., 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco), Ribosomal protein L14b/L23e | Spenn-ch09 | - | View |
Solanum tuberosum | PGSC0003DMG400017151 | 60S ribosomal protein L17 | ST4.03ch09 | - | View |
Trochodendron aralioides | TAR636G1959 | group1 | + | View | |
Trochodendron aralioides | TAR633G1057 | group2 | + | View | |
Trochodendron aralioides | TAR365G0137 | group16 | + | View | |
Theobroma cacao | Thecc.04G263100 | Ribosomal protein L14p/L23e family protein | Chromosome_4 | - | View |
Theobroma cacao | Thecc.01G251600 | Set domain protein | Chromosome_1 | + | View |
Tarenaya hassleriana | THA.LOC104826093 | 60S ribosomal protein L23-like | NW_010967707.1 | + | View |
Tripterygium wilfordii | TWI73G0599 | NC_052232.1 | - | View | |
Tripterygium wilfordii | TWI09G0508 | NC_052245.1 | + | View | |
Tripterygium wilfordii | TWI53G2148 | NC_052244.1 | + | View | |
Vaccinium macrocarpon | vmacro02705 | Similar to RPL23A: 60S ribosomal protein L23 (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vaccinium macrocarpon | vmacro15474 | Similar to RPL23A: 60S ribosomal protein L23 (Arabidopsis thaliana OX%3D3702) | chr4_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01027905001 | chr5 | - | View | |
Vitis vinifera | GSVIVG01028407001 | chr7 | - | View |