Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Cc11_g09640 Putative RING/U-box superfamily protein chr11 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G3050 LG-7 - View
Aethionema arabicum Aa31LG4G4090 LG-4 - View
Acer truncatum Atru.chr9.914 chr9 + View
Actinidia chinensis Actinidia02667 Lachesis_group13 + View
Actinidia chinensis Actinidia35102 Lachesis_group2 + View
Actinidia chinensis Actinidia18917 Lachesis_group9 + View
Arabidopsis lyrata AL2G33570 scaffold_2 - View
Arabidopsis lyrata AL1G30330 scaffold_1 + View
Avicennia marina MSTRG.13557 ScioBoG_18778_HRSCAF_18863 + View
Aquilegia oxysepala Aqoxy3G00194 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X8S18P PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P10SDX PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UBBI2A PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.35GK0Y PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G73760 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G17970.1)%3B Has 8524 Blast hits to 8508 proteins in 269 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2401%3B Fungi - 632%3B Plants - 4276%3B Viruses - 14%3B Other Eukaryotes - 1195 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G17970 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G73760.1)%3B Has 8802 Blast hits to 8789 proteins in 273 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2364%3B Fungi - 695%3B Plants - 4341%3B Viruses - 10%3B Other Eukaryotes - 1392 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB03g15081 ChrB03 - View
Brassica carinata BcaC08g45623 ChrC08 + View
Brassica carinata BcaB03g15727 ChrB03 - View
Brassica napus A07p29680 A07 + View
Brassica napus C06p47910 C06 - View
Brassica napus C08p18300 C08 + View
Brassica napus A07p39620 A07 - View
Brassica napus C06p33860 C06 + View
Brassica oleracea BolC6t39826H C6 - View
Brassica oleracea BolC6t38499H C6 + View
Brassica rapa BraA07t31511Z A07 - View
Brassica rapa BraA07t30608Z A07 + View
Beta vulgaris EL10Ac5g11483 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0000068 PREDICTED: uncharacterized protein LOC100245764 [Vitis vinifera] Chr2 - View
Cicer arietinum L. Ca_25470_v3 Ca_LG8_v3 - View
Cicer arietinum L. Ca_17238_v3 Ca_LG6_v3 - View
Corylus avellana Haze_18740 Similar to HIP1: Probable E3 ubiquitin-protein ligase HIP1 (Oryza sativa subsp. japonica OX%3D39947) 7 + View
Citrus clementina Ciclev10020624m.g scaffold_3 - View
Ceratophyllum demersum CDE12G0243 10 - View
Ceratophyllum demersum CDE08G0213 6 + View
Ceratophyllum demersum CDE06G1804 4 + View
Carpinus fangiana Cfa018567 Cfa07 + View
Carpinus fangiana Cfa019728 Cfa08 - View
Cardamine hirsuta CARHR066830 RING/U-box superfamily protein Chr2 - View
Cardamine hirsuta CARHR018580 RING/U-box superfamily protein Chr1 + View
Carya illinoinensis CiPaw.16G089300 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Chr16 + View
Carya illinoinensis CiPaw.15G135800 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Chr15 + View
Citrullus lanatus ClCG04G010890 RING/U-box superfamily protein LENGTH=367 CG_Chr04 - View
Cucumis melo MELO3C002110.2 E3 ubiquitin-protein ligase MBR2 isoform X2 chr12 - View
Carica papaya Cpa.g.sc3.460 supercontig_3 - View
Chenopodium quinoa AUR62033794 MBR1: E3 ubiquitin-protein ligase MBR1 C_Quinoa_Scaffold_1141 - View
Capsella rubella Carub.0001s1767 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED scaffold_1 + View
Capsella rubella Carub.0002s2051 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED scaffold_2 - View
Cucumis sativus L. CsaV3_1G006940 RING/U-box superfamily protein chr1 + View
Daucus carota DCAR_023221 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv12227 GWHABJS00000006 - View
Davidia involucrata Dinv17509 GWHABJS00000019 - View
Davidia involucrata Dinv31593 GWHABJS00000008 - View
Davidia involucrata Dinv16139 GWHABJS00000018 + View
Durio zibethinus Duzib205G0431 NW_019168381.1 - View
Durio zibethinus Duzib084G0101 NW_019167827.1 + View
Erigeron canadensis ECA233G0920 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.B00829 Chr02 + View
Erythranthe guttata Migut.E00374 scaffold_5 + View
Erythranthe guttata Migut.D01604 scaffold_4 + View
Erythranthe guttata Migut.I00335 scaffold_9 + View
Eutrema salsugineum Thhalv10007935m.g PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10018747m.g scaffold_9 + View
Fragaria x ananassa FAN04G1576 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Fvb5-4 - View
Fragaria x ananassa FAN08G2200 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Fvb5-3 - View
Fragaria x ananassa FAN13G0080 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Fvb5-2 + View
Fragaria x ananassa FAN18G3138 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Fvb5-1 + View
Fragaria vesca FvH4_5g16700 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Fvb5 + View
Gossypium hirsutum Gohir.D07G064200 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED D07 + View
Gossypium hirsutum Gohir.D09G051200 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED D09 + View
Gossypium hirsutum Gohir.A09G050000 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED A09 + View
Gossypium hirsutum Gohir.A07G059400 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED A07 + View
Glycine max Glyma.07G097700 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Gm07 + View
Glycine max Glyma.05G241900 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Gm05 + View
Glycine max Glyma.08G049400 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Gm08 + View
Glycine max Glyma.09G180300 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Gm09 - View
Gossypium raimondii Gorai.001G067700 Chr01 + View
Gossypium raimondii Gorai.006G058500 Chr06 - View
Lupinus albus Lalb_Chr09g0330701 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Lalb_Chr09 - View
Lupinus albus Lalb_Chr16g0387321 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Lalb_Chr16 - View
Lupinus albus Lalb_Chr24g0397961 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Lalb_Chr24 + View
Lupinus albus Lalb_Chr14g0370951 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Lalb_Chr14 - View
Lotus japonicus Lj4g0024779 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED chr4 - View
Lotus japonicus Lj2g0003886 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED chr2 + View
Lonicera japonica Lj3A880T115 GWHAAZE00000003 - View
Lonicera japonica Lj5A153T49 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_8_42581 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_8_142020 Lsat_1_v8_lg_8 - View
Magnolia biondii MBI09_g25153_MAGBIO AED:0.02 Chr09 - View
Malus domestica MD14G1230200 RING/U-box superfamily protein Chr14 + View
Malus domestica MD06G1220700 RING/U-box superfamily protein Chr06 + View
Manihot esculenta Manes.05G133100 Chromosome05 + View
Manihot esculenta Manes.01G015300 Chromosome01 + View
Medicago truncatula Medtr8g106240 C3HC4-type RING zinc finger protein chr8 + View
Medicago truncatula Medtr6g082620 zinc finger, C3HC4 type (RING finger) protein chr6 - View
Nelumbo nucifera Nn3g17958 chr3 + View
Nelumbo nucifera Nn4g23961 chr4 + View
Nicotiana tabacum Nitab4.5_0001456g0140 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001456 - View
Nicotiana tabacum Nitab4.5_0000150g0050 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000150 + View
Olea europaea Oeu017512.1 scaffold1727 + View
Olea europaea Oeu000988.1 chr10 + View
Petunia axillaris Peaxi162Scf01127g00032 RING/U-box superfamily protein Peaxi162Scf01127 + View
Petunia axillaris Peaxi162Scf00683g00346 RING/U-box superfamily protein Peaxi162Scf00683 - View
Punica granatum PGR083G2722 NC_045133.1 + View
Punica granatum PGR119G2109 NC_045132.1 - View
Prunus persica Prupe.5G225100 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Pp05 + View
Pisum sativum Psat1g035040 Ring finger domain chr1LG6 - View
Papaver somniferum PSO478G0597 NC_039361.1 + View
Papaver somniferum PSO017G0577 NC_039362.1 - View
Populus trichocarpa Potri.012G053800 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Chr12 - View
Populus trichocarpa Potri.015G043900 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Chr15 - View
Phaseolus vulgaris Phvul.002G325200 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Chr02 + View
Phaseolus vulgaris Phvul.004G153501 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Chr04 - View
Quercus lobata QL10p026760 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0179401 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim12G0141500 chr12 - View
Rhododendron simsii Rhsim08G0130100 chr08 - View
Striga asiatica SGA_v2.0_scaffold168G38479 scaffold168 + View
Striga asiatica SGA_v2.0_scaffold170G38804 scaffold170 + View
Salix brachista Sabra15G0041500 GWHAAZH00000015 + View
Salix brachista Sabra12G0037600 GWHAAZH00000012 - View
Simmondsia chinensis Sc04g0003340 GWHAASQ00000004 - View
Sechium edule Sed0023942 LG08 + View
Sechium edule Sed0018606 LG01 + View
Solanum lycopersicum Solyc05g008840.2 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1NS63_ARTAN) SL4.0ch05 - View
Solanum lycopersicum Solyc03g118840.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NS86_ARTAN) SL4.0ch03 + View
Schrenkiella parvula Sp5g28950 PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED ch5-7 - View
Schrenkiella parvula Sp1g16030 PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED ch1-1 + View
Solanum pennellii Sopen05g004600 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch05 - View
Solanum pennellii Sopen03g037790 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400030571 Ring finger containing protein ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400005742 Ring finger containing protein ST4.03ch03 + View
Selenicereus undatus Hund02352 Scaffold_33678 - View
Trochodendron aralioides TAR622G0266 group8 - View
Trochodendron aralioides TAR629G3526 group0 + View
Trochodendron aralioides TAR374G0613 group12 - View
Theobroma cacao Thecc.03G042900 RING/U-box superfamily protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104812152 E3 ubiquitin-protein ligase MBR1 NW_010965372.1 + View
Trifolium pratense TPR.G12745 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI60G1712 NC_052246.1 + View
Tripterygium wilfordii TWI81G0466 NC_052251.1 - View
Vaccinium macrocarpon vmacro17698 Similar to RHG1A: Probable E3 ubiquitin-protein ligase RHG1A (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16433 Similar to RHG1A: Probable E3 ubiquitin-protein ligase RHG1A (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro17671 Similar to HIP1: Probable E3 ubiquitin-protein ligase HIP1 (Oryza sativa subsp. japonica OX%3D39947) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G0328 CM024077.1 - View
Vigna mungo VMungo0251G2579 CM024069.1 + View
Vitis vinifera GSVIVG01011840001 chr1 + View
Vitis vinifera GSVIVG01008343001 chr17 - View
Zea mays Zm00001eb294850 Zm00001e032327 Putative RING zinc finger domain superfamily protein 6 + View