Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8950 LG-3 + View
Actinidia chinensis Actinidia14587 Lachesis_group6 - View
Arabidopsis lyrata AL8G27100 scaffold_8 + View
Avicennia marina MSTRG.1846 ScioBoG_102834_HRSCAF_103055 - View
Aquilegia oxysepala Aqoxy7G00194 CHR07 + View
Arabidopsis thaliana AT5G52630 mitochondrial RNAediting factor 1 Encodes a member of the DYW subfamily of pentatricopeptide repeat (PPR) proteins. Loss of MEF1 function affects RNA editing at specific sites in the mitochondrial genome but do not exhibit obvious phenotypes. mitochondrial RNAediting factor 1 (MEF1)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G04780.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC04g20534 ChrC04 + View
Brassica carinata BcaB08g35618 ChrB08 + View
Brassica napus C09p42140 C09 + View
Brassica napus A10p10170 A10 + View
Brassica napus A03p15390 A03 - View
Brassica oleracea BolC9t57094H C9 + View
Brassica rapa BraA10t43097Z A10 + View
Beta vulgaris EL10Ac5g12814 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0046235 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Vitis vinifera] Chr14 + View
Coffea canephora Cc08_g15100 Putative Pentatricopeptide repeat-containing protein At4g13650 chr8 + View
Ceratophyllum demersum CDE03G0202 12 - View
Cardamine hirsuta CARHR265620 Pentatricopeptide repeat-containing protein Chr8 + View
Carya illinoinensis CiPaw.11G131600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr11 - View
Chenopodium quinoa AUR62010722 DOT4: Pentatricopeptide repeat-containing protein DOT4, chloroplastic C_Quinoa_Scaffold_1280 + View
Daucus carota DCAR_009407 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv32481 GWHABJS00000020 + View
Durio zibethinus Duzib138G1394 NW_019167893.1 + View
Durio zibethinus Duzib205G1882 NW_019168381.1 + View
Erigeron canadensis ECA233G4980 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.D02308 Chr04 + View
Erythranthe guttata Migut.A00737 scaffold_1 + View
Erythranthe guttata Migut.B01750 scaffold_2 + View
Fragaria x ananassa FAN01G0460 PF01535//PF12854 - PPR repeat (PPR) // PPR repeat (PPR_1) Fvb7-4 - View
Fragaria x ananassa FAN01G1820 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb7-4 - View
Fragaria x ananassa FAN06G3109 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb7-2 - View
Fragaria x ananassa FAN03G2780 PF12854 - PPR repeat (PPR_1) Fvb7-3 - View
Fragaria x ananassa FAN03G2959 PF01535//PF12854 - PPR repeat (PPR) // PPR repeat (PPR_1) Fvb7-3 - View
Gossypium hirsutum Gohir.D12G255476 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D12 + View
Gossypium hirsutum Gohir.A12G234300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A12 + View
Gossypium hirsutum Gohir.D12G233000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D12 + View
Glycine max Glyma.20G163300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm20 - View
Glycine max Glyma.09G132602 PF13041 - PPR repeat family (PPR_2) Gm09 + View
Glycine max Glyma.16G179400 PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm16 + View
Gossypium raimondii Gorai.008G249400 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0216F.1_g090930 Hma1.2p1_0216F.1 + View
Hydrangea macrophylla Hma1.2p1_0327F.1_g126350 Hma1.2p1_0327F.1 + View
Lupinus albus Lalb_Chr03g0034951 PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Lalb_Chr03 + View
Lotus japonicus Lj2g0026635 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) chr2 - View
Lotus japonicus Lj5g0013384 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) chr5 - View
Malus domestica MD06G1088900 Tetratricopeptide repeat (TPR)-like superfamily protein Chr06 + View
Manihot esculenta Manes.01G257100 Chromosome01 - View
Manihot esculenta Manes.02G018500 Chromosome02 - View
Manihot esculenta Manes.06G153800 Chromosome06 - View
Prunus persica Prupe.5G104800 Pp05 + View
Papaver somniferum PSO170G1060 NC_039360.1 + View
Phaseolus vulgaris Phvul.004G108000 PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Chr04 + View
Phaseolus vulgaris Phvul.007G075500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr07 - View
Rhododendron simsii Rhsim02G0235000 chr02 + View
Salvia bowleyana SalBow4G0551 GWHASIU00000008 + View
Solanum lycopersicum Solyc03g112420.3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1NNB9_ARTAN) SL4.0ch03 + View
Schrenkiella parvula Sp6g14800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch6-6 + View
Trochodendron aralioides TAR375G0366 group15 + View
Tarenaya hassleriana THA.LOC104809371 pentatricopeptide repeat-containing protein At3g53360%2C mitochondrial-like NW_010965019.1 - View
Tripterygium wilfordii TWI23G1105 NC_052239.1 - View
Tripterygium wilfordii TWI39G0767 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NC_052250.1 - View
Vigna mungo VMungo0464G1381 CM024077.1 + View