Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ca_24636_v3 Ca_LG8_v3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G13610 LG-2 + View
Acer truncatum Atru.chr6.1767 chr6 - View
Actinidia chinensis Actinidia09233 Lachesis_group13 - View
Actinidia chinensis Actinidia25947 Lachesis_group22 - View
Actinidia chinensis Actinidia03391 Lachesis_group23 + View
Actinidia chinensis Actinidia10883 Lachesis_group14 - View
Arabidopsis lyrata AL1G46590 scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.97MI0M PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TQ6BSY PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A6QGA7 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.97VU5P PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT1G32400 tobamovirus multiplication 2A TOM2A encodes a 280 amino acid putative four-pass transmembrane protein with a C-terminal farnesylation signal%2C essential for efficient multiplication of tobacco mosaic viruses. tobamovirus multiplication 2A (TOM2A)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: viral replication complex formation and maintenance%3B LOCATED IN: vacuole%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499)%3B BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT2G20230.1)%3B Has 929 Blast hits to 927 proteins in 94 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 729%3B Fungi - 0%3B Plants - 163%3B Viruses - 0%3B Other Eukaryotes - 37 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0049G063 AmTr_v1.0_scaffold00149 + View
Brassica carinata BcaB07g32924 ChrB07 - View
Brassica carinata BcaC05g27277 ChrC05 - View
Brassica napus C05p31850 C05 - View
Brassica napus A09p33770 A09 + View
Brassica oleracea BolC5t31913H C5 - View
Brassica rapa BraA09t38927Z A09 + View
Beta vulgaris EL10Ac5g12184 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0017524 hypothetical protein F383_00667 [Gossypium arboreum] Chr12 - View
Camellia sinensis var. sinensis CSS0043217 hypothetical protein F383_00667 [Gossypium arboreum] Chr14 + View
Cannabis sativa CANSAT21G2140 NC_044374.1 + View
Corylus avellana Haze_08292 Similar to TOM2A: Tobamovirus multiplication protein 2A (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g02110 tobamovirus multiplication 2A chr8 + View
Ceratophyllum demersum CDE11G0843 9 - View
Ceratophyllum demersum CDE11G1034 9 - View
Ceratophyllum demersum CDE02G1722 1 + View
Carpinus fangiana Cfa012391 Cfa05 + View
Cardamine hirsuta CARHR031810 GMFP4 Chr1 - View
Carya illinoinensis CiPaw.12G060600 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Chr12 + View
Citrullus lanatus ClCG09G012320 Peroxidase 20 family protein CG_Chr09 - View
Cucumis melo MELO3C003376.2 tobamovirus multiplication protein 2A chr04 + View
Carica papaya Cpa.g.sc6.429 supercontig_6 + View
Chenopodium quinoa AUR62018763 TOM2A: Tobamovirus multiplication protein 2A C_Quinoa_Scaffold_1817 - View
Chenopodium quinoa AUR62007237 TOM2A: Tobamovirus multiplication protein 2A C_Quinoa_Scaffold_1971 + View
Capsella rubella Carub.0001s3079 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED scaffold_1 - View
Cucumis sativus L. CsaV3_3G049480 tobamovirus multiplication protein 2A chr3 - View
Daucus carota DCAR_008296 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv28921 GWHABJS00000003 + View
Davidia involucrata Dinv25188 GWHABJS00000017 + View
Durio zibethinus Duzib068G1085 NW_019167838.1 - View
Durio zibethinus Duzib084G0778 NW_019167827.1 + View
Durio zibethinus Duzib205G1909 NW_019168381.1 - View
Erigeron canadensis ECA240G2500 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA246G5071 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.E00307 Chr05 - View
Eutrema salsugineum Thhalv10008423m.g PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED scaffold_5 + View
Fragaria x ananassa FAN08G1470 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN04G3256 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Fvb5-4 + View
Fragaria x ananassa FAN18G0875 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Fvb5-1 + View
Fragaria x ananassa FAN13G1058 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Fvb5-2 + View
Gossypium hirsutum Gohir.A12G210400 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED A12 - View
Gossypium hirsutum Gohir.D08G179700 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED D08 - View
Gossypium hirsutum Gohir.A08G159300 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED A08 - View
Gossypium hirsutum Gohir.D12G213100 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED D12 - View
Glycine max Glyma.01G200700 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.11G041400 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Gm11 + View
Glycine max Glyma.05G070266 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Gm05 + View
Glycine max Glyma.17G152900 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Gm17 + View
Gossypium raimondii Gorai.008G228700 Chr08 - View
Gossypium raimondii Gorai.004G188200 Chr04 - View
Helianthus annuus HanXRQChr06g0167291 Putative tetraspanin/Peripherin HanXRQChr06 + View
Hydrangea macrophylla Hma1.2p1_0414F.1_g147790 Hma1.2p1_0414F.1 + View
Lupinus albus Lalb_Chr16g0379191 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Lalb_Chr16 - View
Lupinus albus Lalb_Chr05g0214061 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0386121 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Lalb_Chr16 - View
Lotus japonicus Lj4g0026930 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED chr4 + View
Lotus japonicus Lj2g0004413 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED chr2 + View
Lonicera japonica Lj8A289G61 GWHAAZE00000008 + View
Lonicera japonica Lj2A245G34 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_3_16380 Lsat_1_v8_lg_3 + View
Magnolia biondii MBI04_g13866_MAGBIO AED:0.15 Chr04 - View
Malus domestica MD16G1270100 tobamovirus multiplication 2A Chr16 + View
Malus domestica MD06G1039300 tobamovirus multiplication 2A Chr06 - View
Manihot esculenta Manes.15G173750 Chromosome15 - View
Medicago truncatula Medtr4g098860 tetraspanin family protein chr4 - View
Medicago truncatula Medtr5g014080 tobamovirus multiplication protein 2A chr5 + View
Nelumbo nucifera Nn6g33650 chr6 - View
Nelumbo nucifera Nn1g00597 chr1 - View
Olea europaea Oeu053060.2 scaffold630 + View
Punica granatum PGR042G3462 NC_045130.1 - View
Prunus persica Prupe.5G044200 Pp05 - View
Pisum sativum Psat2g174040 Tetraspanin family chr2LG1 - View
Pisum sativum Psat4g078280 Tetraspanin family chr4LG4 + View
Papaver somniferum PSO782G3745 NC_039365.1 - View
Papaver somniferum PSO063G5143 NC_039364.1 + View
Populus trichocarpa Potri.001G146100 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Chr01 - View
Populus trichocarpa Potri.003G087800 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED Chr03 + View
Phaseolus vulgaris Phvul.002G004900 Chr02 + View
Quercus lobata QL12p006905 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0208641 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim11G0011600 chr11 + View
Rhododendron simsii Rhsim07G0122900 chr07 + View
Striga asiatica SGA_v2.0_scaffold6G03190 scaffold6 + View
Salix brachista Sabra01G0114800 GWHAAZH00000001 - View
Salix brachista Sabra03G0057700 GWHAAZH00000003 + View
Simmondsia chinensis Sc07g0008840 GWHAASQ00000007 + View
Simmondsia chinensis Sc01g0007710 GWHAASQ00000001 - View
Sechium edule Sed0015720 LG05 - View
Sechium edule Sed0014407 LG01 + View
Solanum lycopersicum Solyc08g077220.3 Tobamovirus multiplication protein 2A (AHRD V3.3 *** A0A2G3DCL9_CAPCH) SL4.0ch08 - View
Schrenkiella parvula Sp1g28490 PTHR19282//PTHR19282:SF262 - TETRASPANIN // SUBFAMILY NOT NAMED ch1-1 + View
Solanum pennellii Sopen08g025800 TOM2A encodes a 280 amino acid putative four-pass transmembrane protein with a C-terminal farnesylation signal, essential for efficient multiplication of tobacco mosaic viruses. | tobamovirus multiplication 2A (TOM2A) | FUNCTIONS IN: protein binding | INVOLVED IN: viral replication complex formation and maintenance | LOCATED IN: vacuole, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Tetraspanin | BEST Arabidopsis thaliana protein match is: Tetraspanin family protein Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400024218 Conserved gene of unknown function ST4.03ch08 - View
Selenicereus undatus Hund11267 Scaffold_10417 - View
Selenicereus undatus Hund14425 Scaffold_33677 - View
Trochodendron aralioides TAR629G2190 group0 - View
Trochodendron aralioides TAR636G1627 group1 + View
Trochodendron aralioides TAR374G0269 group12 - View
Theobroma cacao Thecc.03G233500 Tobamovirus multiplication 2A Chromosome_3 - View
Trifolium pratense TPR.G19198 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI15G0733 NC_052247.1 + View
Tripterygium wilfordii TWI81G0776 NC_052251.1 + View
Vaccinium macrocarpon vmacro00348 Similar to TOM2A: Tobamovirus multiplication protein 2A (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro14150 Similar to TOM2A: Tobamovirus multiplication protein 2A (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0152 CM024074.1 + View
Vitis vinifera GSVIVG01013236001 chr2 - View
Zea mays Zm00001eb390640 Zm00001e037814 Tobamovirus multiplication protein 2A 9 - View
Zea mays Zm00001eb024230 Zm00001e002408 Tobamovirus multiplication protein 2A 1 + View