Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ca_09331_v3 Ca_LG3_v3 - View
Ca_21471_v3 Ca_LG7_v3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.114 chr2 + View
Actinidia chinensis Actinidia16836 Lachesis_group12 - View
Actinidia chinensis Actinidia21506 Lachesis_group16 + View
Actinidia chinensis Actinidia35541 Lachesis_group2 - View
Avicennia marina MSTRG.27963 ScioBoG_94932_HRSCAF_95134 - View
Avicennia marina MSTRG.5126 ScioBoG_102838_HRSCAF_103081 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.00AX0T PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.88CVAX PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CYV5WW PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6CJL2B PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT5G27030 TOPLESS-related 3 TOPLESS-related 3 (TPR3)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: primary shoot apical meristem specification%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C CTLH%2C C-terminal LisH motif (InterPro:IPR006595)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C LisH dimerisation motif (InterPro:IPR006594)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 (TAIR:AT3G16830.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC03g17820 ChrC03 + View
Brassica napus C02p58480 C02 + View
Brassica napus A06p37140 A06 - View
Brassica napus C07p41290 C07 + View
Brassica napus A02p38870 A02 + View
Brassica oleracea BolC2t11909H C2 + View
Brassica oleracea BolC5t33701H C5 - View
Brassica oleracea BolC7t44654H C7 + View
Brassica rapa BraA02t08861Z A02 + View
Brassica rapa BraA06t26640Z A06 - View
Beta vulgaris EL10Ac4g09871 Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0007939 PREDICTED: topless-related protein 3-like [Sesamum indicum] Chr6 + View
Camellia sinensis var. sinensis CSS0032223 PREDICTED: topless-related protein 3-like [Sesamum indicum] Chr3 + View
Cannabis sativa CANSAT54G2874 NC_044375.1 - View
Corylus avellana Haze_04101 Similar to TPR3: Topless-related protein 3 (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_01141 Similar to TPR2: Topless-related protein 2 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g34530 Topless-related protein 3 chr2 + View
Citrus clementina Ciclev10000084m.g scaffold_5 + View
Ceratophyllum demersum CDE05G3300 3 - View
Ceratophyllum demersum CDE11G0071 9 - View
Carpinus fangiana Cfa006670 Cfa02 + View
Cardamine hirsuta CARHR186480 WD-repeat protein, putative Chr6 - View
Carya illinoinensis CiPaw.02G078900 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Chr02 - View
Carya illinoinensis CiPaw.08G158600 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Chr08 - View
Carya illinoinensis CiPaw.07G025300 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Chr07 + View
Citrullus lanatus ClCG02G015190 WD-repeat protein, putative CG_Chr02 - View
Cucumis melo MELO3C004208.2 protein TOPLESS chr05 - View
Corchorus olitorius COL.COLO4_03799 hypothetical protein AWUE01010672.1 + View
Carica papaya Cpa.g.sc48.124 supercontig_48 + View
Chenopodium quinoa AUR62005242 TPR3: Topless-related protein 3 C_Quinoa_Scaffold_3820 + View
Chenopodium quinoa AUR62000722 TPR3: Topless-related protein 3 C_Quinoa_Scaffold_2088 - View
Cucumis sativus L. CsaV3_2G006820 Topless-related protein chr2 + View
Daucus carota DCAR_003375 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv24408 GWHABJS00000005 - View
Davidia involucrata Dinv30845 GWHABJS00000002 - View
Durio zibethinus Duzib106G1416 NW_019168492.1 - View
Durio zibethinus Duzib177G0971 NW_019168004.1 + View
Durio zibethinus Duzib212G0836 NW_019168026.1 - View
Durio zibethinus Duzib052G0706 NW_019167849.1 + View
Durio zibethinus Duzib151G0130 NW_019167904.1 + View
Erigeron canadensis ECA236G0883 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.H03269 Chr08 + View
Eucalyptus grandis Eucgr.B02075 Chr02 - View
Eutrema salsugineum Thhalv10003550m.g PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED scaffold_6 - View
Fragaria x ananassa FAN12G1730 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Fvb4-3 + View
Fragaria x ananassa FAN12G2066 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Fvb4-3 - View
Fragaria x ananassa FAN07G0073 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Fvb4-4 - View
Fragaria vesca FvH4_4g18910 KOG0266//KOG0279//KOG0293//KOG0310//KOG0316//KOG0318//KOG0319 - WD40 repeat-containing protein // G protein beta subunit-like protein // WD40 repeat-containing protein // Conserved WD40 repeat-containing protein // Conserved WD40 repeat-containing protein // WD40 repeat stress protein/actin interacting protein // WD40-repeat-containing subunit of the 18S rRNA processing complex Fvb4 + View
Fragaria vesca FvH4_6g07000 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Fvb6 + View
Gossypium hirsutum Gohir.A08G207700 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED A08 - View
Gossypium hirsutum Gohir.D08G224300 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED D08 - View
Glycine max Glyma.19G230500 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Gm19 - View
Glycine max Glyma.03G233400 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Gm03 - View
Glycine max Glyma.10G150000 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Gm10 - View
Glycine max Glyma.20G238400 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Gm20 + View
Gossypium raimondii Gorai.004G238300 Chr04 - View
Helianthus annuus HanXRQChr01g0011831 Probable TOPLESS-related 3 HanXRQChr01 - View
Lupinus albus Lalb_Chr04g0260561 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Lalb_Chr04 - View
Lupinus albus Lalb_Chr12g0201091 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Lalb_Chr12 - View
Lupinus albus Lalb_Chr21g0310451 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Lalb_Chr21 - View
Lupinus albus Lalb_Chr20g0121121 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Lalb_Chr20 - View
Lupinus albus Lalb_Chr18g0059091 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Lalb_Chr18 - View
Lupinus albus Lalb_Chr06g0167591 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Lalb_Chr06 - View
Lupinus albus Lalb_Chr15g0077541 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Lalb_Chr15 + View
Lotus japonicus Lj5g0011137 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED chr5 - View
Lonicera japonica Lj9A202G60 GWHAAZE00000009 + View
Malus domestica MD13G1162100 TOPLESS-related 2 Chr13 - View
Malus domestica MD04G1197000 TOPLESS-related 3 Chr04 - View
Malus domestica MD12G1209900 TOPLESS-related 3 Chr12 - View
Manihot esculenta Manes.08G114500 Chromosome08 - View
Manihot esculenta Manes.09G174100 Chromosome09 + View
Medicago truncatula Medtr1g083700 topless-like protein chr1 + View
Medicago truncatula Medtr7g112460 topless-like protein chr7 - View
Medicago truncatula Medtr2g435370 transducin family protein/WD-40 repeat protein chr2 - View
Nelumbo nucifera Nn3g21577 chr3 + View
Nelumbo nucifera Nn4g25710 chr4 - View
Olea europaea Oeu012136.2 chr13 + View
Oryza sativa ssp. japonica Os01g0254100 Similar to Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like. Similar to CTV.2. chr01 - View
Petunia axillaris Peaxi162Scf00037g01815 TOPLESS-related 3 Peaxi162Scf00037 + View
Petunia axillaris Peaxi162Scf00071g00541 TOPLESS-related 3 Peaxi162Scf00071 - View
Punica granatum PGR031G0004 NC_045127.1 - View
Prunus persica Prupe.1G129400 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Pp01 - View
Prunus persica Prupe.6G317500 Pp06 - View
Pisum sativum Psat6g151680 WD domain + G-beta repeat chr6LG2 + View
Populus trichocarpa Potri.013G012100 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Chr13 - View
Populus trichocarpa Potri.005G021700 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED Chr05 - View
Phaseolus vulgaris Phvul.001G227000 Chr01 - View
Phaseolus vulgaris Phvul.007G198900 PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Chr07 + View
Quercus lobata QL06p010906 6 + View
Rosa chinensis RcHm_v2.0_Chr3g0456531 RcHm_v2.0_Chr3 + View
Rosa chinensis RcHm_v2.0_Chr4g0423811 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim11G0092100 chr11 + View
Striga asiatica SGA_v2.0_scaffold80G25883 scaffold80 - View
Salvia bowleyana SalBow3G0334 GWHASIU00000006 - View
Salix brachista Sabra05G0027600 GWHAAZH00000005 - View
Salix brachista Sabra13G0010700 GWHAAZH00000013 - View
Simmondsia chinensis Sc09g0002830 GWHAASQ00000009 - View
Simmondsia chinensis Sc16g0008680 GWHAASQ00000016 - View
Sechium edule Sed0007741 LG11 + View
Sechium edule Sed0010649 LG03 + View
Solanum lycopersicum Solyc01g100050.3 TOPLESS 3 SL4.0ch01 + View
Schrenkiella parvula Sp2g21040 PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED ch2-4 + View
Solanum pennellii Sopen01g043580 TOPLESS-related 3 (TPR3) | FUNCTIONS IN: protein binding | INVOLVED IN: primary shoot apical meristem specification | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , CTLH, C-terminal LisH motif , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , LisH dimerisation motif , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 ., WD40/YVTN repeat-like-containing domain Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400024727 WD-repeat protein ST4.03ch01 + View
Selenicereus undatus Hund21726 Scaffold_33680 + View
Selenicereus undatus Hund07117 Scaffold_33676 + View
Trochodendron aralioides TAR362G0084 group17 - View
Trochodendron aralioides TAR365G0494 group16 - View
Trochodendron aralioides TAR633G1606 group2 + View
Theobroma cacao Thecc.05G317400 TOPLESS-related 3 Chromosome_5 + View
Theobroma cacao Thecc.04G291100 TOPLESS-related 2 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104818737 topless-related protein 3 isoform X1 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104802787 topless-related protein 3-like isoform X1 NW_010970490.1 - View
Tarenaya hassleriana THA.LOC104805906 topless-related protein 3-like NW_010961290.1 + View
Trifolium pratense TPR.G1654 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI56G1212 NC_052242.1 - View
Tripterygium wilfordii TWI36G1665 NC_052237.1 - View
Tripterygium wilfordii TWI12G1057 NC_052243.1 + View
Vaccinium macrocarpon vmacro01532 Similar to TPR3: Topless-related protein 3 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2863 CM024072.1 - View
Vigna mungo VMungo1383G1268 CM024070.1 - View
Vigna mungo VMungo0720G1548 CM024071.1 - View
Vitis vinifera GSVIVG01031186001 chr14 - View