Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ca_10240_v3 Ca_LG4_v3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.862 chr5 - View
Actinidia chinensis Actinidia25871 Lachesis_group15 + View
Actinidia chinensis Actinidia06406 Lachesis_group24 + View
Actinidia chinensis Actinidia21339 Lachesis_group19 + View
Arabidopsis lyrata AL6G51490 scaffold_6 + View
Amaranthus hybridus Ah.02g112710 Protein translocase subunit SecA, chloroplastic (EC 7.4.2.4) AmaHy_arrow1_Scaffold_2 - View
Aquilegia oxysepala Aqoxy5G02821 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CW9EKZ K03070 - preprotein translocase subunit SecA (secA) arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HFGS9U K03070 - preprotein translocase subunit SecA (secA) arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XGP1KG PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT4G01800 Albino or Glassy Yellow 1 Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis%2C the absence of which triggers a retrograde signal%2C eventually leading to a reprogramming of chloroplast and mitochondrial gene expression. Albino or Glassy Yellow 1 (AGY1)%3B FUNCTIONS IN: ATPase activity%2C P-P-bond-hydrolysis-driven protein transmembrane transporter activity%2C ATP binding%3B INVOLVED IN: in 6 processes%3B LOCATED IN: chloroplast stroma%2C chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: SecA Wing/Scaffold (InterPro:IPR011116)%2C SecA%2C preprotein translocase (InterPro:IPR022491)%2C SecA preprotein%2C cross-linking domain (InterPro:IPR011130)%2C SecA DEAD-like (InterPro:IPR011115)%2C SecA conserved site (InterPro:IPR020937)%2C SecA motor DEAD (InterPro:IPR014018)%2C SecA protein (InterPro:IPR000185)%3B BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1)%3B Has 20907 Blast hits to 13323 proteins in 2793 species: Archae - 2%3B Bacteria - 12417%3B Metazoa - 53%3B Fungi - 1%3B Plants - 99%3B Viruses - 0%3B Other Eukaryotes - 8335 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0796G193 AmTr_v1.0_scaffold00045 + View
Brassica carinata BcaC04g24072 ChrC04 + View
Brassica carinata BcaC01g06802 ChrC01 + View
Brassica carinata BcaB01g02379 ChrB01 - View
Brassica napus C03p38470 C03 + View
Brassica napus C09p01350 C09 - View
Brassica napus A03p31480 A03 + View
Brassica napus A09p01300 A09 - View
Brassica oleracea BolC9t53069H C9 - View
Brassica oleracea BolC3t16120H C3 + View
Brassica rapa BraA03t12328Z A03 + View
Brassica rapa BraA09t35795Z A09 - View
Beta vulgaris EL10As5g23621 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED Scaffold_0005 - View
Cannabis sativa CANSAT25G3150 NC_044370.1 + View
Corylus avellana Haze_05146 Similar to At3g07100: Protein transport protein Sec24-like At3g07100 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc01_g21780 Protein translocase subunit SecA, chloroplastic chr1 - View
Citrus clementina Ciclev10018812m.g scaffold_3 + View
Ceratophyllum demersum CDE02G4194 1 - View
Carpinus fangiana Cfa004911 Cfa02 + View
Carya illinoinensis CiPaw.08G082600 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED Chr08 - View
Carica papaya Cpa.g.sc57.13 supercontig_57 + View
Capsella rubella Carub.0006s3541 scaffold_6 + View
Daucus carota DCAR_005716 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_002936 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv12082 GWHABJS00000007 - View
Davidia involucrata Dinv33168 GWHABJS00000010 + View
Durio zibethinus Duzib138G0905 NW_019167893.1 - View
Durio zibethinus Duzib133G1021 NW_019167938.1 - View
Eucalyptus grandis Eucgr.K00564 Chr11 - View
Eucalyptus grandis Eucgr.A01004 Chr01 - View
Erythranthe guttata Migut.D00012 scaffold_4 - View
Eutrema salsugineum Thhalv10028392m.g PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED scaffold_3 - View
Fragaria x ananassa FAN28G2823 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Fvb1-1 + View
Fragaria x ananassa FAN26G0951 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED Fvb1-2 - View
Fragaria x ananassa FAN19G3148 K03070 - preprotein translocase subunit SecA (secA) Fvb1-4 - View
Fragaria x ananassa FAN23G2191 K03070 - preprotein translocase subunit SecA (secA) Fvb1-3 - View
Fragaria vesca FvH4_1g26240 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED Fvb1 - View
Gossypium hirsutum Gohir.A12G119866 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED A12 - View
Gossypium hirsutum Gohir.D12G123500 K03070 - preprotein translocase subunit SecA (secA) D12 - View
Gossypium hirsutum Gohir.D11G109400 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.A11G104600 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED A11 + View
Glycine max Glyma.10G137800 K03070 - preprotein translocase subunit SecA (secA) Gm10 + View
Glycine max Glyma.19G221300 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Gm19 + View
Glycine max Glyma.02G007700 K03070 - preprotein translocase subunit SecA (secA) Gm02 - View
Glycine max Glyma.03G224400 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Gm03 + View
Gossypium raimondii Gorai.008G134600 Chr08 - View
Gossypium raimondii Gorai.007G117000 Chr07 + View
Lupinus albus Lalb_Chr18g0046391 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Lalb_Chr18 - View
Lupinus albus Lalb_Chr04g0260211 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Lalb_Chr04 + View
Lupinus albus Lalb_Chr02g0147141 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Lalb_Chr02 + View
Lotus japonicus Lj1g0021730 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED chr1 + View
Lotus japonicus Lj5g0004951 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED chr5 + View
Lonicera japonica Lj1C8G4 GWHAAZE00000001 - View
Magnolia biondii MBI19_g30287_MAGBIO AED:0.11 Chr19 - View
Malus domestica MD09G1290300 Sec23/Sec24 protein transport family protein Chr09 + View
Malus domestica MD17G1284900 Sec23/Sec24 protein transport family protein Chr17 + View
Manihot esculenta Manes.01G235000 Chromosome01 + View
Manihot esculenta Manes.05G009100 Chromosome05 + View
Medicago truncatula Medtr7g110640 protein transporter Sec23-like protein chr7 + View
Medicago truncatula Medtr1g086050 preprotein translocase subunit SecA chr1 - View
Nelumbo nucifera Nn3g21945 chr3 + View
Nicotiana tabacum Nitab4.5_0000222g0360 Sec23/Sec24, helical domain, Sec23/Sec24, trunk domain, von Willebrand factor, type A, Zinc finger, Sec23/Sec24-type, Sec23/Sec24 beta-sandwich Nitab4.5_0000222 + View
Olea europaea Oeu038076.1 chr12 - View
Punica granatum PGR042G2980 NC_045130.1 + View
Punica granatum PGR142G4102 NC_045128.1 + View
Prunus persica Prupe.3G002700 PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM Pp03 - View
Pisum sativum Psat6g158920 SecA DEAD-like domain chr6LG2 - View
Pisum sativum Psat3g016720 Sec23/Sec24 trunk domain chr3LG5 - View
Papaver somniferum PSO761G0525 NW_020622381.1 - View
Papaver somniferum PSO210G4393 NC_039359.1 - View
Populus trichocarpa Potri.014G112266 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED Chr14 - View
Populus trichocarpa Potri.002G187100 PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED Chr02 - View
Phaseolus vulgaris Phvul.007G209266 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED Chr07 - View
Phaseolus vulgaris Phvul.001G218200 Chr01 + View
Quercus lobata QL12p034939 12 + View
Rosa chinensis RcHm_v2.0_Chr3g0485781 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim01G0000300 chr01 + View
Striga asiatica SGA_v2.0_scaffold417G51250 scaffold417 - View
Salix brachista Sabra14G0082600 GWHAAZH00000014 - View
Simmondsia chinensis Sc17g0000010 GWHAASQ00000017 + View
Schrenkiella parvula Sp6g01650 PTHR30612//PTHR30612:SF4 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // SUBFAMILY NOT NAMED ch6-1 - View
Solanum tuberosum PGSC0003DMG400001123 Protein translocase subunit secA ST4.03ch01 + View
Trochodendron aralioides TAR633G2711 group2 + View
Trochodendron aralioides TAR365G0940 group16 + View
Theobroma cacao Thecc.01G325100 Sec23/Sec24 protein transport family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104801326 protein transport protein SEC23 NW_010969548.1 + View
Trifolium pratense TPR.G2501 Tp57577_TGAC_v2_LG1 + View
Trifolium pratense TPR.G3065 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI59G0772 NC_052248.1 - View
Tripterygium wilfordii TWI14G1058 NC_052249.1 - View
Tripterygium wilfordii TWI23G1021 NC_052239.1 + View
Vaccinium macrocarpon vmacro02360 Similar to SEC231: Protein transport protein SEC23-1 (Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX%3D284593) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G1946 CM024070.1 + View
Vigna mungo VMungo0720G2451 CM024071.1 + View
Vitis vinifera GSVIVG01028249001 chr7 - View
Zea mays Zm00001eb340490 Zm00001e026229 Sec23/Sec24 protein transport family protein 8 + View