Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ca_03450_v3 Ca_LG1_v3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G14170 LG-5 - View
Arabidopsis lyrata AL6G28900 scaffold_6 - View
Arabidopsis lyrata AL3G13450 scaffold_3 - View
Arabidopsis thaliana AT5G17810 WUSCHEL related homeobox 12 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WUSCHEL related homeobox 12 (WOX12)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356)%2C Homeodomain-like (InterPro:IPR009057)%3B BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 11 (TAIR:AT3G03660.2)%3B Has 533 Blast hits to 523 proteins in 47 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 532%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). WUSCHEL related homeobox 12 (WOX12)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356)%2C Homeodomain-like (InterPro:IPR009057)%3B BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 11 (TAIR:AT3G03660.2). Chr5 - View
Arabidopsis thaliana AT3G03660 WUSCHEL related homeobox 11 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WUSCHEL related homeobox 11 (WOX11)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356)%2C Homeodomain-like (InterPro:IPR009057)%3B BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 12 (TAIR:AT5G17810.2)%3B Has 592 Blast hits to 582 proteins in 72 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 52%3B Fungi - 5%3B Plants - 532%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC03g13544 ChrC03 - View
Brassica carinata BcaC05g30260 ChrC05 + View
Brassica napus A10p21640 A10 + View
Brassica napus BNapus_Darmor_BZH_scaffold_78p00260 BNapus_Darmor_BZH_scaffold_78 - View
Brassica napus A01p41450 A01 + View
Brassica napus A05p43670 A05 + View
Brassica napus C02p09360 C02 - View
Brassica napus C05p63250 C05 + View
Brassica oleracea BolC5t34988H C5 + View
Brassica oleracea BolC1t05818H C1 + View
Brassica oleracea BolC9t58772H C9 + View
Brassica oleracea BolC2t06843H C2 - View
Brassica rapa BraA02t05410Z A02 - View
Brassica rapa BraA05t23106Z A05 + View
Brassica rapa BraA01t04569Z A01 + View
Brassica rapa BraA10t44226Z A10 + View
Cardamine hirsuta CARHR195360 WUSCHEL related homeobox 12 Chr6 + View
Cardamine hirsuta CARHR077710 WUSCHEL related homeobox 11 Chr3 - View
Capsella rubella Carub.0003s0282 PF00046 - Homeobox domain (Homeobox) scaffold_3 - View
Capsella rubella Carub.0006s1604 PF00046 - Homeobox domain (Homeobox) scaffold_6 - View
Daucus carota DCAR_020646 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv14569 GWHABJS00000015 + View
Davidia involucrata Dinv37024 GWHABJS00000021 - View
Durio zibethinus Duzib128G0772 NW_019168481.1 + View
Durio zibethinus Duzib177G0231 NW_019168004.1 - View
Eucalyptus grandis Eucgr.A02149 Chr01 + View
Erythranthe guttata Migut.K00205 scaffold_11 - View
Eutrema salsugineum Thhalv10022222m.g PF00046 - Homeobox domain (Homeobox) scaffold_13 + View
Eutrema salsugineum Thhalv10015651m.g PF00046 - Homeobox domain (Homeobox) scaffold_2 - View
Glycine max Glyma.19G118400 PF00046 - Homeobox domain (Homeobox) Gm19 + View
Glycine max Glyma.03G007600 PF00046 - Homeobox domain (Homeobox) Gm03 - View
Lupinus albus Lalb_Chr14g0364921 PF00046 - Homeobox domain (Homeobox) Lalb_Chr14 + View
Lupinus albus Lalb_Chr02g0157471 PF00046 - Homeobox domain (Homeobox) Lalb_Chr02 + View
Lotus japonicus Lj1g0027637 PF00046 - Homeobox domain (Homeobox) chr1 + View
Lotus japonicus Lj2g0009529 PF00046 - Homeobox domain (Homeobox) chr2 - View
Malus domestica MD12G1012600 WUSCHEL related homeobox 12 Chr12 + View
Malus domestica MD14G1010400 WUSCHEL related homeobox 11 Chr14 + View
Manihot esculenta Manes.09G136200 Chromosome09 - View
Medicago truncatula Medtr7g086940 wuschel-related homeobox protein chr7 + View
Medicago truncatula Medtr6g027390 wuschel-related homeobox protein chr6 - View
Olea europaea Oeu044211.1 chr17 + View
Punica granatum PGR042G2341 NC_045130.1 - View
Pisum sativum Psat1g086680 Homeobox domain chr1LG6 + View
Pisum sativum Psat3g085840 Homeobox domain chr3LG5 - View
Quercus lobata QL07p016887 7 + View
Schrenkiella parvula Sp3g02640 PF00046 - Homeobox domain (Homeobox) ch3-1 - View
Schrenkiella parvula Sp6g26440 PF00046 - Homeobox domain (Homeobox) ch6-6 + View
Trochodendron aralioides TAR369G0650 group18 + View
Theobroma cacao Thecc.05G240500 WUSCHEL related homeobox 11 Chromosome_5 - View
Tripterygium wilfordii TWI34G1130 NC_052235.1 + View
Vigna mungo VMungo1383G2093 CM024070.1 + View
Vitis vinifera GSVIVG01029942001 chr8 - View