Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ca_21253_v3 Ca_LG7_v3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G13100 LG-3 + View
Acer truncatum Atru.chr7.758 chr7 + View
Actinidia chinensis Actinidia01277 Lachesis_group18 + View
Arabidopsis lyrata AL8G33170 scaffold_8 + View
Arabidopsis lyrata AL7G27060 scaffold_7 + View
Avicennia marina MSTRG.26543 ScioBoG_52287_HRSCAF_52434 - View
Aquilegia oxysepala Aqoxy7G02793 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.W857VY PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M14RRE PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F4TFZL PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.98Y59K PTHR22951//PTHR22951:SF25 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 - View
Arabidopsis thaliana AT5G57200 ENTH/ANTH/VHS superfamily protein ENTH/ANTH/VHS superfamily protein%3B FUNCTIONS IN: phospholipid binding%2C clathrin binding%2C binding%2C phosphatidylinositol binding%3B INVOLVED IN: N-terminal protein myristoylation%2C clathrin coat assembly%3B LOCATED IN: clathrin coat%3B EXPRESSED IN: petal%2C leaf whorl%2C male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Epsin-like%2C N-terminal (InterPro:IPR013809)%2C ANTH (InterPro:IPR011417)%2C ENTH/VHS (InterPro:IPR008942)%2C Clathrin adaptor%2C phosphoinositide-binding%2C GAT-like (InterPro:IPR014712)%3B BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G25940.1)%3B Has 13426 Blast hits to 6658 proteins in 473 species: Archae - 43%3B Bacteria - 452%3B Metazoa - 5386%3B Fungi - 950%3B Plants - 797%3B Viruses - 658%3B Other Eukaryotes - 5140 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT4G25940 ENTH/ANTH/VHS superfamily protein ENTH/ANTH/VHS superfamily protein%3B FUNCTIONS IN: phospholipid binding%2C clathrin binding%2C binding%2C phosphatidylinositol binding%3B INVOLVED IN: clathrin coat assembly%3B LOCATED IN: clathrin coat%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Epsin-like%2C N-terminal (InterPro:IPR013809)%2C ANTH (InterPro:IPR011417)%2C ENTH/VHS (InterPro:IPR008942)%2C Clathrin adaptor%2C phosphoinositide-binding%2C GAT-like (InterPro:IPR014712)%3B BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G57200.1)%3B Has 8063 Blast hits to 4237 proteins in 339 species: Archae - 25%3B Bacteria - 270%3B Metazoa - 3478%3B Fungi - 641%3B Plants - 597%3B Viruses - 312%3B Other Eukaryotes - 2740 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0626G108 AmTr_v1.0_scaffold00025 + View
Brassica carinata BcaB05g22327 ChrB05 + View
Brassica carinata BcaC04g19990 ChrC04 - View
Brassica napus C09p49030 C09 + View
Brassica napus A10p14590 A10 + View
Brassica napus C01p21520 C01 - View
Brassica napus A01p17200 A01 - View
Brassica napus C02p14500 C02 - View
Brassica napus A02p08660 A02 - View
Brassica oleracea BolC2t07574H C2 - View
Brassica oleracea BolC1t02072H C1 - View
Brassica oleracea BolC9t57754H C9 + View
Brassica rapa BraA10t43546Z A10 + View
Brassica rapa BraA01t01676Z A01 - View
Brassica rapa BraA02t05936Z A02 - View
Beta vulgaris EL10Ac9g21716 PTHR22951:SF26 - CLATHRIN COAT ASSEMBLY PROTEIN AP180 Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0022651 unnamed protein product [Coffea canephora] Chr2 - View
Camellia sinensis var. sinensis CSS0039170 unnamed protein product [Coffea canephora] Chr4 - View
Corylus avellana Haze_22017 Similar to At5g57200: Putative clathrin assembly protein At5g57200 (Arabidopsis thaliana OX%3D3702) 3 - View
Citrus clementina Ciclev10010653m.g scaffold_1 - View
Carpinus fangiana Cfa013450 Cfa05 - View
Cardamine hirsuta CARHR270990 ENTH/ANTH/VHS superfamily protein Chr8 + View
Carya illinoinensis CiPaw.07G196800 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Chr07 - View
Citrullus lanatus ClCG11G011780 ENTH/ANTH/VHS superfamily protein LENGTH=591 CG_Chr11 + View
Cucumis melo MELO3C003976.2 Clathrin assembly protein, putative chr05 + View
Carica papaya Cpa.g.sc95.13 supercontig_95 + View
Capsella rubella Carub.0007s1501 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED scaffold_7 + View
Capsella rubella Carub.0008s1771 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED scaffold_8 + View
Cucumis sativus L. CsaV3_2G008710 Clathrin assembly protein AP180 chr2 - View
Davidia involucrata Dinv41173 GWHABJS00000013 - View
Davidia involucrata Dinv25439 GWHABJS00000001 + View
Durio zibethinus Duzib168G0006 NW_019168159.1 + View
Durio zibethinus Duzib150G0075 NW_019167882.1 - View
Erigeron canadensis ECA236G1923 Conyza_canadensis_scaffold:3 + View
Erythranthe guttata Migut.J00800 scaffold_10 + View
Erythranthe guttata Migut.L01883 scaffold_12 + View
Eutrema salsugineum Thhalv10013043m.g PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED scaffold_2 - View
Eutrema salsugineum Thhalv10024721m.g PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED scaffold_1 + View
Fragaria x ananassa FAN12G3828 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Fvb4-3 - View
Fragaria x ananassa FAN07G2671 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Fvb4-4 - View
Fragaria x ananassa FAN17G1456 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Fvb4-2 + View
Fragaria x ananassa FAN22G1254 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria vesca FvH4_4g07320 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.A05G002400 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.D05G003000 PTHR22951//PTHR22951:SF25 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED D05 + View
Glycine max Glyma.09G059500 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Gm09 - View
Glycine max Glyma.15G165800 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Gm15 - View
Glycine max Glyma.17G059500 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Gm17 + View
Glycine max Glyma.13G100400 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Gm13 - View
Gossypium raimondii Gorai.009G002600 Chr09 + View
Lupinus albus Lalb_Chr08g0231831 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr08 - View
Lupinus albus Lalb_Chr11g0074781 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr11 + View
Lotus japonicus Lj4g0023693 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED chr4 + View
Lotus japonicus Lj6g0024154 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED chr6 + View
Lactuca sativa Lsat_1_v5_gn_7_56320 PTHR22951//PTHR22951:SF25 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_7 + View
Lactuca sativa Lsat_1_v5_gn_8_69280 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 + View
Magnolia biondii MBI13_g34039_MAGBIO AED:0.23 Chr13 + View
Magnolia biondii MBI16_g05836_MAGBIO AED:0.15 Chr16 - View
Magnolia biondii MBI10_g00761_MAGBIO AED:0.01 Chr10 - View
Malus domestica MD13G1242200 ENTH/ANTH/VHS superfamily protein Chr13 + View
Malus domestica MD16G1249100 ENTH/ANTH/VHS superfamily protein Chr16 + View
Manihot esculenta Manes.14G158100 Chromosome14 + View
Medicago truncatula Medtr2g037980 clathrin assembly plant-like protein chr2 - View
Medicago truncatula Medtr4g127440 clathrin assembly plant-like protein chr4 + View
Prunus persica Prupe.1G075800 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Pp01 + View
Pisum sativum Psat1g145640 ANTH domain chr1LG6 + View
Populus trichocarpa Potri.006G075800 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Chr06 + View
Populus trichocarpa Potri.018G142800 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Chr18 + View
Phaseolus vulgaris Phvul.003G141500 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Chr03 - View
Phaseolus vulgaris Phvul.009G236300 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Chr09 + View
Quercus lobata QL02p046816 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr4g0399671 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim01G0117200 chr01 + View
Salix brachista Sabra06G0056500 GWHAAZH00000006 + View
Salix brachista Sabra18G0116600 GWHAAZH00000018 + View
Sechium edule Sed0009774 LG03 + View
Sechium edule Sed0015547 LG11 - View
Schrenkiella parvula Sp6g18930 PTHR22951//PTHR22951:SF17 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED ch6-6 + View
Trochodendron aralioides TAR383G0754 group10 - View
Theobroma cacao Thecc.09G185800 ENTH/ANTH/VHS superfamily protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104811775 putative clathrin assembly protein At5g57200 NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104817777 putative clathrin assembly protein At5g57200 isoform X1 NW_010966021.1 + View
Trifolium pratense TPR.G5434 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI34G0787 NC_052235.1 - View
Vaccinium macrocarpon vmacro20816 Similar to At4g25940: Putative clathrin assembly protein At4g25940 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2753 CM024072.1 - View
Vigna mungo VMungo1215G0077 CM024074.1 - View
Vitis vinifera GSVIVG01010864001 chr11 - View