Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr3.3179 | chr3 | - | View | |
Avicennia marina | MSTRG.21031 | ScioBoG_26769_HRSCAF_26899 | - | View | |
Avicennia marina | MSTRG.18767 | ScioBoG_22153_HRSCAF_22259 | + | View | |
Aquilegia oxysepala | Aqoxy2G01061 | CHR02 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.R19W3K | K14593 - capsanthin/capsorubin synthase (CCS1) | arahy.Tifrunner.gnm1.Arahy.18 | + | View |
Camellia sinensis var. sinensis | CSS0005316 | neoxanthin synthase [Camellia nitidissima] | Chr13 | + | View |
Capsicum annuum | CAN.G919.38 | PGAv.1.6.scaffold919 | + | View | |
Cannabis sativa | CANSAT54G2319 | NC_044375.1 | - | View | |
Coffea canephora | Cc01_g08880 | Neoxanthin synthase, chloroplastic | chr1 | - | View |
Citrus clementina | Ciclev10028245m.g | scaffold_8 | - | View | |
Ceratophyllum demersum | CDE02G0095 | 1 | - | View | |
Carpinus fangiana | Cfa009993 | Cfa04 | - | View | |
Carya illinoinensis | CiPaw.13G133400 | 5.3.99.9 - Neoxanthin synthase / NSY | Chr13 | - | View |
Carica papaya | Cpa.g.sc195.16 | supercontig_195 | + | View | |
Davidia involucrata | Dinv22823 | GWHABJS00000007 | - | View | |
Davidia involucrata | Dinv08945 | GWHABJS00000010 | + | View | |
Durio zibethinus | Duzib170G0872 | NW_019167871.1 | - | View | |
Erigeron canadensis | ECA233G5258 | Conyza_canadensis_scaffold:1 | - | View | |
Eucalyptus grandis | Eucgr.B03832 | Chr02 | - | View | |
Erythranthe guttata | Migut.D02432 | scaffold_4 | - | View | |
Fragaria x ananassa | FAN11G1519 | K14593 - capsanthin/capsorubin synthase (CCS1) | Fvb3-4 | + | View |
Gossypium hirsutum | Gohir.D09G096600 | K14593 - capsanthin/capsorubin synthase (CCS1) | D09 | + | View |
Gossypium hirsutum | Gohir.A09G096800 | PTHR13789//PTHR13789:SF203 - MONOOXYGENASE // SUBFAMILY NOT NAMED | A09 | + | View |
Glycine max | Glyma.12G186300 | 5.3.99.9 - Neoxanthin synthase / NSY | Gm12 | + | View |
Glycine max | Glyma.13G315200 | K14593 - capsanthin/capsorubin synthase (CCS1) | Gm13 | - | View |
Gossypium raimondii | Gorai.006G113300 | Chr06 | + | View | |
Lotus japonicus | Lj3g0027090 | K14593 - capsanthin/capsorubin synthase (CCS1) | chr3 | - | View |
Lactuca sativa | Lsat_1_v5_gn_6_38441 | K14593 - capsanthin/capsorubin synthase (CCS1) | Lsat_1_v8_lg_6 | - | View |
Malus domestica | MD03G1148700 | lycopene cyclase | Chr03 | + | View |
Malus domestica | MD11G1168000 | lycopene cyclase | Chr11 | + | View |
Manihot esculenta | Manes.11G163700 | Chromosome11 | + | View | |
Medicago truncatula | Medtr2g086700 | capsanthin/capsorubin synthase, chromoplast protein | chr2 | + | View |
Olea europaea | Oeu002361.1 | scaffold1075 | - | View | |
Petunia axillaris | Peaxi162Scf00091g00064 | Lycopene beta cyclase, chloroplastic | Peaxi162Scf00091 | + | View |
Punica granatum | PGR102G1868 | NC_045129.1 | + | View | |
Prunus persica | Prupe.6G135000 | K14593 - capsanthin/capsorubin synthase (CCS1) | Pp06 | + | View |
Populus trichocarpa | Potri.009G159800 | K14593 - capsanthin/capsorubin synthase (CCS1) | Chr09 | + | View |
Phaseolus vulgaris | Phvul.005G122400 | K14593 - capsanthin/capsorubin synthase (CCS1) | Chr05 | - | View |
Quercus lobata | QL01p011923 | 1 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0046551 | RcHm_v2.0_Chr5 | - | View | |
Striga asiatica | SGA_v2.0_scaffold22G09844 | scaffold22 | - | View | |
Striga asiatica | SGA_v2.0_scaffold100G29596 | scaffold100 | + | View | |
Salvia bowleyana | SalBow6G3353 | GWHASIU00000002 | - | View | |
Salix brachista | Sabra09G0125000 | GWHAAZH00000009 | + | View | |
Solanum lycopersicum | Solyc06g074240.3 | Beta-carotene,Pfam:PF05834 | SL4.0ch06 | - | View |
Solanum pennellii | Sopen06g030660 | Capsanthin/capsorubin synthase, chloroplast precursor (EC 5.3.99.8) - Capsicum annuum (Bell pepper), Encodes a protein with lycopene, #946, -cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the, #949, -cyclase which adds only one ring, the, #946, -cyclase introduces a ring at both ends of lycopene to form the bicyclic, beta, -carotene. | lycopene cyclase (LYC) | CONTAINS InterPro DOMAIN/s: Lycopene beta/epsilon cyclase , Lycopene cyclase, beta/epsilon | BEST Arabidopsis thaliana protein match is: Lycopene beta/epsilon cyclase protein | Spenn-ch06 | - | View |
Solanum tuberosum | PGSC0003DMG400005886 | Neoxanthin synthase, chloroplastic | ST4.03ch06 | - | View |
Trochodendron aralioides | TAR623G0206 | group7 | + | View | |
Theobroma cacao | Thecc.09G279500 | Lycopene cyclase | Chromosome_9 | - | View |
Trifolium pratense | TPR.G4584 | Tp57577_TGAC_v2_LG7 | + | View | |
Tripterygium wilfordii | TWI79G0311 | NC_052238.1 | + | View | |
Tripterygium wilfordii | TWI31G0135 | NC_052233.1 | - | View | |
Vigna mungo | VMungo1080G0247 | CM024079.1 | + | View |