Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G460 LG-4 - View
Acer truncatum Atru.chr1.3016 chr1 - View
Acer truncatum Atru.chr7.2409 chr7 - View
Actinidia chinensis Actinidia15781 Lachesis_group27 + View
Actinidia chinensis Actinidia13242 Lachesis_group18 + View
Actinidia chinensis Actinidia01763 Lachesis_group1 + View
Arabidopsis lyrata AL7G19470 scaffold_7 - View
Arabidopsis lyrata AL2G41340 scaffold_2 + View
Avicennia marina MSTRG.11121 ScioBoG_14204_HRSCAF_14270 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.072L8S K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AH5TY5 3.2.1.15 - Polygalacturonase / Pectinase arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT1G80140 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: sperm cell%2C leaf%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Parallel beta-helix repeat (InterPro:IPR006626)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G70500.1)%3B Has 3888 Blast hits to 3869 proteins in 461 species: Archae - 6%3B Bacteria - 1036%3B Metazoa - 13%3B Fungi - 1239%3B Plants - 1472%3B Viruses - 0%3B Other Eukaryotes - 122 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT4G32370 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G32375.1)%3B Has 3869 Blast hits to 3850 proteins in 465 species: Archae - 4%3B Bacteria - 1036%3B Metazoa - 14%3B Fungi - 1253%3B Plants - 1444%3B Viruses - 0%3B Other Eukaryotes - 118 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaB02g07292 ChrB02 + View
Brassica carinata BcaC01g03858 ChrC01 + View
Brassica carinata BcaC08g45295 ChrC08 - View
Brassica napus C06p28970 C06 - View
Brassica napus A07p26550 A07 - View
Brassica napus C03p47850 C03 - View
Brassica napus C01p06610 C01 - View
Brassica napus A05p33630 A05 + View
Brassica napus C02p37540 C02 - View
Brassica oleracea BolC6t38063H C6 - View
Brassica oleracea BolC5t33810H C5 + View
Brassica rapa BraA05t22187Z A05 + View
Brassica rapa BraA07t30298Z A07 - View
Beta vulgaris EL10Ac9g21931 3.2.1.15 - Polygalacturonase / Pectinase Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G395.50 PGAv.1.6.scaffold395 + View
Cannabis sativa CANSAT56G1742 NC_044371.1 + View
Corylus avellana Haze_16522 Similar to At1g80170: Probable polygalacturonase At1g80170 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g04140 Probable polygalacturonase At1g80170 chr4 + View
Citrus clementina Ciclev10027523m.g scaffold_7 + View
Citrus clementina Ciclev10010440m.g scaffold_1 + View
Ceratophyllum demersum CDE02G4186 1 - View
Carpinus fangiana Cfa001996 Cfa01 - View
Cardamine hirsuta CARHR074310 Pectin lyase-like superfamily protein Chr2 + View
Carya illinoinensis CiPaw.01G245200 3.2.1.15 - Polygalacturonase / Pectinase Chr01 + View
Citrullus lanatus ClCG09G002770 Pectin lyase-like superfamily protein LENGTH=444 CG_Chr09 + View
Cucumis melo MELO3C023406.2 Polygalacturonase chr01 - View
Corchorus olitorius COL.COLO4_12917 Glycoside hydrolase%2C family 28 AWUE01014981.1 + View
Carica papaya Cpa.g.sc10.230 supercontig_10 + View
Chenopodium quinoa AUR62016369 At1g80170: Probable polygalacturonase At1g80170 C_Quinoa_Scaffold_3514 - View
Chenopodium quinoa AUR62011550 At1g80170: Probable polygalacturonase At1g80170 C_Quinoa_Scaffold_3333 - View
Capsella rubella Carub.0002s2737 scaffold_2 - View
Cucumis sativus L. CsaV3_7G032560 Polygalacturonase chr7 - View
Davidia involucrata Dinv38108 GWHABJS00000006 + View
Davidia involucrata Dinv30586 GWHABJS00000019 + View
Durio zibethinus Duzib235G0036 NW_019167982.1 + View
Erigeron canadensis ECA233G3394 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.C01172 Chr03 - View
Eucalyptus grandis Eucgr.C02785 Chr03 + View
Eucalyptus grandis Eucgr.J03054 Chr10 + View
Erythranthe guttata Migut.I00784 scaffold_9 + View
Erythranthe guttata Migut.D01059 scaffold_4 + View
Eutrema salsugineum Thhalv10019484m.g PTHR31375:SF45 - PECTIN LYASE-LIKE PROTEIN scaffold_9 + View
Fragaria x ananassa FAN27G0019 PF00295//PF12708 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // Pectate lyase superfamily protein (Pectate_lyase_3) Fvb2-1 + View
Fragaria x ananassa FAN14G2353 3.2.1.15 - Polygalacturonase / Pectinase Fvb6-1 + View
Fragaria x ananassa FAN09G4554 3.2.1.15 - Polygalacturonase / Pectinase Fvb6-2 + View
Fragaria x ananassa FAN24G0161 3.2.1.15 - Polygalacturonase / Pectinase Fvb2-2 - View
Fragaria x ananassa FAN02G1230 3.2.1.15 - Polygalacturonase / Pectinase Fvb6-4 - View
Fragaria vesca FvH4_6g30200 3.2.1.15 - Polygalacturonase / Pectinase Fvb6 - View
Gossypium hirsutum Gohir.D10G076400 3.2.1.15 - Polygalacturonase / Pectinase D10 - View
Gossypium hirsutum Gohir.D06G193000 3.2.1.15 - Polygalacturonase / Pectinase D06 - View
Gossypium hirsutum Gohir.A10G074900 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) A10 + View
Glycine max Glyma.13G364700 3.2.1.15 - Polygalacturonase / Pectinase Gm13 - View
Glycine max Glyma.15G008900 3.2.1.15 - Polygalacturonase / Pectinase Gm15 + View
Gossypium raimondii Gorai.010G226900 Chr10 - View
Gossypium raimondii Gorai.011G082200 Chr11 - View
Lupinus albus Lalb_Chr22g0350961 3.2.1.15 - Polygalacturonase / Pectinase Lalb_Chr22 - View
Lupinus albus Lalb_Chr24g0395571 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Lalb_Chr24 - View
Lotus japonicus Lj3g0022842 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) chr3 + View
Lonicera japonica Lj9A502G36 GWHAAZE00000009 + View
Lonicera japonica Lj5A70T49 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_131300 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI04_g07637_MAGBIO AED:0.12 Chr04 + View
Magnolia biondii MBI01_g47380_MAGBIO AED:0.41 Chr01 - View
Malus domestica MD17G1207200 Pectin lyase-like superfamily protein Chr17 + View
Manihot esculenta Manes.04G114650 Chromosome04 + View
Medicago truncatula Medtr1g012390 polygalacturonase chr1 - View
Medicago truncatula Medtr2g103410 polygalacturonase chr2 + View
Nelumbo nucifera Nn8g39405 chr8 + View
Nelumbo nucifera Nn8g39451 chr8 - View
Nelumbo nucifera Nn2g12020 chr2 - View
Nicotiana tabacum Nitab4.5_0001764g0010 Parallel beta-helix repeat, Pectin lyase fold/virulence factor, Glycoside hydrolase, family 28, Pectin lyase fold Nitab4.5_0001764 + View
Nicotiana tabacum Nitab4.5_0000620g0030 Pectin lyase fold/virulence factor, Glycoside hydrolase, family 28, Pectin lyase fold Nitab4.5_0000620 - View
Punica granatum PGR142G2890 NC_045128.1 + View
Punica granatum PGR031G1053 NC_045127.1 - View
Punica granatum PGR102G0441 NC_045129.1 + View
Prunus persica Prupe.3G081700 3.2.1.15 - Polygalacturonase / Pectinase Pp03 + View
Pisum sativum Psat5g301280 Glycosyl hydrolases family 28 chr5LG3 - View
Papaver somniferum PSO210G5848 NC_039359.1 + View
Populus trichocarpa Potri.001G171900 3.2.1.15 - Polygalacturonase / Pectinase Chr01 - View
Populus trichocarpa Potri.018G028700 3.2.1.15 - Polygalacturonase / Pectinase Chr18 + View
Populus trichocarpa Potri.006G252900 3.2.1.15 - Polygalacturonase / Pectinase Chr06 - View
Phaseolus vulgaris Phvul.005G175800 3.2.1.15 - Polygalacturonase / Pectinase Chr05 + View
Quercus lobata QL05p028218 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0136441 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0214500 chr08 + View
Striga asiatica SGA_v2.0_scaffold16G07607 scaffold16 - View
Striga asiatica SGA_v2.0_scaffold5G02668 scaffold5 + View
Striga asiatica SGA_v2.0_scaffold37G14782 scaffold37 + View
Salvia bowleyana SalBow2G2168 GWHASIU00000007 - View
Salix brachista Sabra01G0139700 GWHAAZH00000001 + View
Salix brachista Sabra18G0030900 GWHAAZH00000018 + View
Sechium edule Sed0008390 LG07 - View
Sechium edule Sed0027159 LG06 + View
Solanum lycopersicum Solyc06g068040.3 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1NJW4_ARTAN) SL4.0ch06 + View
Solanum lycopersicum Solyc03g116500.4 polygalacturonase (XOPG1) SL4.0ch03 + View
Schrenkiella parvula Sp5g35630 3.2.1.15 - Polygalacturonase / Pectinase ch5-7 + View
Solanum pennellii Sopen03g035390 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: plant-type cell wall | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch03 + View
Solanum pennellii Sopen06g025320 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: plant-type cell wall | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400028541 Polygalacturonase ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400000608 Polygalacturonase ST4.03ch03 + View
Selenicereus undatus Hund06574 Scaffold_33676 - View
Trochodendron aralioides TAR636G2895 group1 + View
Trochodendron aralioides TAR383G0270 group10 + View
Trochodendron aralioides TAR625G0078 group4 + View
Theobroma cacao Thecc.06G070500 Pectin lyase-like superfamily protein Chromosome_6 - View
Theobroma cacao Thecc.09G126300 F18B13.22 protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104812499 probable polygalacturonase At1g80170 isoform X1 NW_010965372.1 + View
Trifolium pratense TPR.G37158 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI18G0432 NC_052241.1 + View
Vaccinium macrocarpon vmacro18972 Similar to At1g80170: Probable polygalacturonase At1g80170 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01017279001 chr9 + View