Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0034499 PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X3 [Nicotiana tomentosiformis] Chr7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G3510 LG-11 - View
Aethionema arabicum Aa31LG4G17660 LG-4 - View
Acer truncatum Atru.chr12.2201 chr12 - View
Actinidia chinensis Actinidia34223 Lachesis_group3 - View
Actinidia chinensis Actinidia06147 Lachesis_group21 - View
Actinidia chinensis Actinidia08651 Lachesis_group6 + View
Arabidopsis lyrata AL6G35690 scaffold_6 - View
Arabidopsis lyrata AL5G28980 scaffold_5 - View
Avicennia marina MSTRG.8651 ScioBoG_11560_HRSCAF_11609 + View
Avicennia marina MSTRG.51 ScioBoG_102831_HRSCAF_103044 + View
Amaranthus hybridus Ah.07g205570 Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 (SMC hinge domain-containing protein GMI1) (Protein GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1) AmaHy_arrow1_Scaffold_7 + View
Aquilegia oxysepala Aqoxy7G00072 CHR07 + View
Arabidopsis thaliana AT3G49250 defective in meristem silencing 3 Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation. DEFECTIVE IN MERISTEM SILENCING 3 (DMS3)%3B BEST Arabidopsis thaliana protein match is: gamma-irradiation and mitomycin c induced 1 (TAIR:AT5G24280.1)%3B Has 82 Blast hits to 81 proteins in 17 species: Archae - 6%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 71%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G24275 En/Spm-like transposon Chr5 - View
Amborella trichopoda ATR0602G075 AmTr_v1.0_scaffold00021 + View
Brassica carinata BcaNung01218 Contig469 - View
Brassica carinata BcaB01g00734 ChrB01 + View
Brassica napus C07p43490 C07 + View
Brassica napus C08p24250 C08 - View
Brassica oleracea BolC7t44875H C7 + View
Brassica oleracea BolC8t50042H C8 - View
Brassica rapa BraA06t26425Z A06 + View
Beta vulgaris EL10Ac3g05278 PF13589 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) Chr3_EL10_PGA_scaffold7 + View
Beta vulgaris EL10Ac1g00254 PF13968 - Domain of unknown function (DUF4220) (DUF4220) Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G481.9 PGAv.1.6.scaffold481 - View
Cannabis sativa CANSAT21G2573 NC_044374.1 + View
Cicer arietinum L. Ca_12791_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_16709_v3 Ca_LG5_v3 - View
Corylus avellana Haze_00208 Similar to GMI1: Structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_15669 Similar to DMS3: Protein DEFECTIVE IN MERISTEM SILENCING 3 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g01510 Putative uncharacterized protein chr2 + View
Citrus clementina Ciclev10022846m.g scaffold_3 - View
Ceratophyllum demersum CDE10G0237 8 + View
Ceratophyllum demersum CDE03G0337 12 + View
Carpinus fangiana Cfa016232 Cfa06 - View
Cardamine hirsuta CARHR158090 Gamma-irradiation and mitomycin c induced 1 Chr5 - View
Cardamine hirsuta CARHR189220 Gamma-irradiation and mitomycin c induced 1 Chr6 + View
Carya illinoinensis CiPaw.06G046000 PF13589 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) Chr06 + View
Citrullus lanatus ClCG01G000420 Gamma-irradiation and mitomycin c induced 1 CG_Chr01 + View
Citrullus lanatus ClCG05G008950 Unknown protein CG_Chr05 - View
Cucumis melo MELO3C005887.2 Defective in meristem silencing 3 chr09 - View
Cucumis melo MELO3C008496.2 Protein-tyrosine sulfotransferase-like protein chr06 - View
Carica papaya Cpa.g.sc3.88 supercontig_3 - View
Chenopodium quinoa AUR62006087 DMS3: Protein DEFECTIVE IN MERISTEM SILENCING 3 C_Quinoa_Scaffold_1001 + View
Chenopodium quinoa AUR62019406 DMS3: Protein DEFECTIVE IN MERISTEM SILENCING 3 C_Quinoa_Scaffold_3107 - View
Capsella rubella Carub.0006s2203 PTHR33566//PTHR33566:SF1 - FAMILY NOT NAMED // GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 scaffold_6 - View
Capsella rubella Carub.0005s1547 scaffold_5 - View
Cucumis sativus L. CsaV3_5G000480 protein DEFECTIVE IN MERISTEM SILENCING 3 chr5 + View
Daucus carota DCAR_010599 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_008927 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv35339 GWHABJS00000009 + View
Davidia involucrata Dinv29277 GWHABJS00000004 + View
Durio zibethinus Duzib068G0185 NW_019167838.1 + View
Durio zibethinus Duzib205G0894 NW_019168381.1 - View
Durio zibethinus Duzib084G0071 NW_019167827.1 + View
Erigeron canadensis ECA233G5228 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA238G1287 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.K00385 Chr11 - View
Erythranthe guttata Migut.F00208 scaffold_6 + View
Erythranthe guttata Migut.F01028 scaffold_6 + View
Eutrema salsugineum Thhalv10003513m.g PTHR33566:SF1 - GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 scaffold_6 - View
Fragaria x ananassa FAN06G3553 PF13589 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) Fvb7-2 + View
Fragaria x ananassa FAN10G3885 Fvb7-1 - View
Fragaria x ananassa FAN06G3021 Fvb7-2 - View
Fragaria x ananassa FAN10G1688 Fvb7-1 - View
Fragaria x ananassa FAN01G1356 Fvb7-4 + View
Fragaria x ananassa FAN06G1778 PF13589 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) Fvb7-2 + View
Fragaria x ananassa FAN03G3021 Fvb7-3 + View
Fragaria x ananassa FAN06G0828 Fvb7-2 - View
Fragaria x ananassa FAN01G2588 Fvb7-4 - View
Fragaria x ananassa FAN03G0412 Fvb7-3 - View
Fragaria vesca FvH4_7g31511 Fvb7 + View
Fragaria vesca FvH4_7g16780 Fvb7 - View
Gossypium hirsutum Gohir.A11G015200 PF13589 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) A11 - View
Gossypium hirsutum Gohir.A12G249700 A12 + View
Gossypium hirsutum Gohir.D12G250500 D12 + View
Gossypium hirsutum Gohir.D11G015300 PF13589 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) D11 - View
Glycine max Glyma.06G129200 Gm06 - View
Glycine max Glyma.19G256600 Gm19 - View
Glycine max Glyma.04G235500 Gm04 + View
Gossypium raimondii Gorai.008G268600 Chr08 + View
Gossypium raimondii Gorai.007G015700 Chr07 - View
Helianthus annuus HanXRQChr04g0100491 Uncharacterized protein, conserved in plant genome(s), supported by expression data HanXRQChr04 + View
Hydrangea macrophylla Hma1.2p1_0404F.1_g145340 Hma1.2p1_0404F.1 + View
Lupinus albus Lalb_Chr11g0066881 Lalb_Chr11 - View
Lupinus albus Lalb_Chr08g0240221 Lalb_Chr08 + View
Lotus japonicus Lj1g0018421 chr1 + View
Lonicera japonica Lj3A904G78 GWHAAZE00000003 + View
Lonicera japonica Lj1C1018T17 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_8_5261 PF13589 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_2_136121 Lsat_1_v8_lg_2 - View
Magnolia biondii MBI06_g13415_MAGBIO AED:0.28 Chr06 - View
Magnolia biondii MBI07_g37059_MAGBIO AED:0.16 Chr07 - View
Malus domestica MD01G1218300 defective in meristem silencing 3 Chr01 + View
Malus domestica MD01G1082600 defective in meristem silencing 3 Chr01 - View
Malus domestica MD07G1288100 gamma-irradiation and mitomycin c induced 1 Chr07 + View
Malus domestica MD07G1150900 defective in meristem silencing 3 Chr07 - View
Manihot esculenta Manes.01G245700 Chromosome01 + View
Manihot esculenta Manes.01G183500 Chromosome01 - View
Medicago truncatula Medtr3g491560 defective in meristem silencing protein chr3 - View
Nelumbo nucifera Nn1g00259 chr1 - View
Olea europaea Oeu041052.4 chr12 + View
Petunia axillaris Peaxi162Scf00618g00337 defective in meristem silencing 3 Peaxi162Scf00618 + View
Petunia axillaris Peaxi162Scf00740g00139 Gamma-irradiation and mitomycin c induced 1, putative isoform 5 Peaxi162Scf00740 - View
Prunus persica Prupe.2G190000 Pp02 - View
Prunus persica Prupe.2G309600 Pp02 + View
Pisum sativum Psat5g076840 Unknown gene chr5LG3 + View
Pisum sativum Psat6g034720 Histidine kinase- + DNA gyrase B- + and HSP90-like ATPase chr6LG2 - View
Papaver somniferum PSO135G0284 NW_020631041.1 - View
Papaver somniferum PSO384G4859 NC_039368.1 + View
Papaver somniferum PSO063G4550 NC_039364.1 - View
Papaver somniferum PSO170G6091 NC_039360.1 + View
Populus trichocarpa Potri.015G012600 Chr15 + View
Populus trichocarpa Potri.012G015800 Chr12 - View
Populus trichocarpa Potri.002G172000 Chr02 - View
Phaseolus vulgaris Phvul.009G052300 Chr09 + View
Phaseolus vulgaris Phvul.006G113900 Chr06 - View
Quercus lobata QL09p008772 9 + View
Rosa chinensis RcHm_v2.0_Chr1g0380531 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim09G0205800 chr09 - View
Rhododendron simsii Rhsim03G0209000 chr03 - View
Striga asiatica SGA_v2.0_scaffold192G40538 scaffold192 + View
Striga asiatica SGA_v2.0_scaffold55G19771 scaffold55 - View
Striga asiatica SGA_v2.0_scaffold44G16806 scaffold44 - View
Salvia bowleyana SalBow4G1120 GWHASIU00000008 + View
Salvia bowleyana SalBow2G1109 GWHASIU00000007 + View
Salix brachista Sabra12G0016000 GWHAAZH00000012 + View
Simmondsia chinensis Sc13g0009920 GWHAASQ00000013 + View
Sechium edule Sed0011102 LG01 + View
Sechium edule Sed0016547 LG05 + View
Sechium edule Sed0025154 LG13 + View
Sechium edule Sed0024875 LG07 - View
Solanum lycopersicum Solyc03g083120.3 gamma-irradiation and mitomycin c induced 1 (AHRD V3.3 *-* AT5G24280.3) SL4.0ch03 + View
Solanum lycopersicum Solyc06g051990.4 Protein DEFECTIVE IN MERISTEM SILENCING 3 (AHRD V3.3 *** A0A2G3C6G2_CAPCH) SL4.0ch06 - View
Schrenkiella parvula Sp2g23080 PTHR33566//PTHR33566:SF1 - FAMILY NOT NAMED // GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 ch2-4 + View
Solanum pennellii Sopen06g018050 Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation. | DEFECTIVE IN MERISTEM SILENCING 3 (DMS3) | BEST Arabidopsis thaliana protein match is: gamma-irradiation and mitomycin c induced 1 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400009131 Gene of unknown function ST4.03ch03 - View
Selenicereus undatus Hund11659 Scaffold_33679 + View
Selenicereus undatus Hund21005 Scaffold_33673 - View
Trochodendron aralioides TAR375G0704 group15 - View
Trifolium pratense TPR.G19386 Tp57577_TGAC_v2_LG2 + View
Trifolium pratense TPR.G4753 Tp57577_TGAC_v2_LG6 + View
Trifolium pratense TPR.G12082 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI39G0445 NC_052250.1 - View
Tripterygium wilfordii TWI23G0785 NC_052239.1 + View
Tripterygium wilfordii TWI14G0383 NC_052249.1 - View
Vaccinium macrocarpon vmacro10123 Similar to DMS3: Protein DEFECTIVE IN MERISTEM SILENCING 3 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06385 Similar to DMS3: Protein DEFECTIVE IN MERISTEM SILENCING 3 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro22637 Similar to DMS3: Protein DEFECTIVE IN MERISTEM SILENCING 3 (Arabidopsis thaliana OX%3D3702) scaffold00428_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1923 CM024072.1 + View
Vigna mungo VMungo0540G0270 CM024075.1 + View
Vitis vinifera GSVIVG01038555001 chr16 + View