Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023077 Basic helix-loop-helix DNA-binding superfamily protein, putative [Theobroma cacao] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G17910 LG-5 - View
Acer truncatum Atru.chr6.1463 chr6 - View
Actinidia chinensis Actinidia09453 Lachesis_group15 - View
Actinidia chinensis Actinidia23778 Lachesis_group9 + View
Arabidopsis lyrata AL3G18640 scaffold_3 - View
Arabidopsis lyrata AL8G21540 scaffold_8 + View
Avicennia marina MSTRG.20986 ScioBoG_26769_HRSCAF_26899 - View
Avicennia marina MSTRG.18820 ScioBoG_22153_HRSCAF_22259 + View
Amaranthus hybridus Ah.08g218870 Transcription factor bHLH62 (Basic helix-loop-helix protein 62) (AtbHLH62) (bHLH 62) (Transcription factor EN 85) (bHLH transcription factor bHLH062) AmaHy_arrow1_Scaffold_8 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K68BG4 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.160YLH PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT3G07340 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1)%3B Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 62%3B Fungi - 52%3B Plants - 2177%3B Viruses - 0%3B Other Eukaryotes - 344 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G48560 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%2C LP.08 eight leaves visible%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G07340.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0561G145 AmTr_v1.0_scaffold00013 + View
Brassica carinata BcaB07g30029 ChrB07 + View
Brassica carinata BcaC03g17660 ChrC03 + View
Brassica carinata BcaC06g30782 ChrC06 - View
Brassica napus A06p39090 A06 - View
Brassica napus A02p37530 A02 + View
Brassica napus C02p56660 C02 + View
Brassica napus A05p40860 A05 + View
Brassica napus C05p59960 C05 + View
Brassica napus C07p39250 C07 + View
Brassica oleracea BolC7t44445H C7 + View
Brassica oleracea BolC2t11727H C2 + View
Brassica rapa BraA05t22816Z A05 + View
Brassica rapa BraA06t26823Z A06 - View
Brassica rapa BraA02t08739Z A02 + View
Beta vulgaris EL10Ac7g17962 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G874.21 PGAv.1.6.scaffold874 - View
Cannabis sativa CANSAT01G0029 NC_044373.1 - View
Cannabis sativa CANSAT01G0341 NC_044373.1 + View
Cicer arietinum L. Ca_23203_v3 Ca_LG7_v3 + View
Corylus avellana Haze_03328 Similar to BHLH62: Transcription factor bHLH62 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc01_g16390 Putative Transcription factor bHLH62 chr1 + View
Citrus clementina Ciclev10031135m.g scaffold_4 + View
Ceratophyllum demersum CDE02G0737 1 - View
Carpinus fangiana Cfa010380 Cfa04 + View
Cardamine hirsuta CARHR183460 BHLH transcription factor Chr6 - View
Cardamine hirsuta CARHR081990 BHLH transcription factor Chr3 - View
Carya illinoinensis CiPaw.14G041100 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr14 - View
Carya illinoinensis CiPaw.13G051900 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr13 - View
Citrullus lanatus ClCG09G008520 BHLH transcription factor CG_Chr09 - View
Cucumis melo MELO3C021101.2 transcription factor bHLH78 chr01 + View
Carica papaya Cpa.g.sc8.103 supercontig_8 + View
Chenopodium quinoa AUR62001169 BHLH62: Transcription factor bHLH62 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62022154 BHLH62: Transcription factor bHLH62 C_Quinoa_Scaffold_4319 + View
Capsella rubella Carub.0008s0819 PTHR12565//PTHR12565:SF154 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH62-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_7G026520 transcription factor bHLH78 chr7 + View
Daucus carota DCAR_012684 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_004752 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv28830 GWHABJS00000010 + View
Davidia involucrata Dinv34340 GWHABJS00000007 - View
Durio zibethinus Duzib211G0622 NW_019168049.1 - View
Durio zibethinus Duzib138G1041 NW_019167893.1 - View
Durio zibethinus Duzib151G1014 NW_019167904.1 + View
Erigeron canadensis ECA248G1029 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA247G3759 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.H00748 Chr08 + View
Eucalyptus grandis Eucgr.K02109 Chr11 + View
Erythranthe guttata Migut.D02478 scaffold_4 + View
Eutrema salsugineum Thhalv10020729m.g PTHR12565:SF154 - TRANSCRIPTION FACTOR BHLH62-RELATED scaffold_13 + View
Eutrema salsugineum Thhalv10004031m.g PTHR12565:SF154 - TRANSCRIPTION FACTOR BHLH62-RELATED scaffold_6 - View
Fragaria x ananassa FAN27G1691 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb2-1 + View
Fragaria x ananassa FAN24G3073 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb2-2 - View
Fragaria vesca FvH4_2g18100 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb2 + View
Gossypium hirsutum Gohir.A11G140800 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED A11 - View
Gossypium hirsutum Gohir.A07G197850 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED A07 + View
Gossypium hirsutum Gohir.A07G091300 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED A07 + View
Gossypium hirsutum Gohir.D11G147300 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED D11 - View
Gossypium hirsutum Gohir.D02G018200 PTHR12565:SF159 - TRANSCRIPTION FACTOR BHLH76 D02 + View
Gossypium hirsutum Gohir.D07G204200 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED D07 + View
Gossypium hirsutum Gohir.A09G208450 PTHR12565:SF152 - TRANSCRIPTION FACTOR BHLH63-RELATED A09 - View
Gossypium hirsutum Gohir.D07G096000 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED D07 + View
Gossypium hirsutum Gohir.D09G201901 PTHR12565:SF152 - TRANSCRIPTION FACTOR BHLH63-RELATED D09 - View
Gossypium hirsutum Gohir.A02G016500 PTHR12565:SF159 - TRANSCRIPTION FACTOR BHLH76 A02 + View
Glycine max Glyma.18G156900 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm18 + View
Glycine max Glyma.08G346300 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm08 + View
Glycine max Glyma.16G087300 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm16 + View
Glycine max Glyma.03G086800 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm03 - View
Gossypium raimondii Gorai.001G103300 Chr01 + View
Gossypium raimondii Gorai.005G022400 Chr05 + View
Gossypium raimondii Gorai.006G225700 Chr06 - View
Gossypium raimondii Gorai.007G157700 Chr07 - View
Gossypium raimondii Gorai.001G230000 Chr01 + View
Hydrangea macrophylla Hma1.2p1_0226F.1_g095135 Hma1.2p1_0226F.1 + View
Lupinus albus Lalb_Chr03g0041321 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr03 + View
Lupinus albus Lalb_Chr01g0022061 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr01 + View
Lupinus albus Lalb_Chr07g0194441 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr07 - View
Lupinus albus Lalb_Chr19g0125971 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr19 - View
Lotus japonicus Lj1g0024530 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED chr1 + View
Lotus japonicus Lj3g0018722 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED chr3 + View
Lonicera japonica Lj2A1121G79 GWHAAZE00000002 + View
Lonicera japonica Lj1A95T46 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_9_17741 Lsat_1_v8_lg_9 - View
Malus domestica MD10G1156100 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr10 + View
Malus domestica MD05G1165800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr05 + View
Manihot esculenta Manes.13G052300 Chromosome13 - View
Manihot esculenta Manes.12G051000 Chromosome12 - View
Medicago truncatula Medtr8g012290 BHLH transcription factor chr8 + View
Medicago truncatula Medtr7g053410 BHLH transcription factor chr7 + View
Nicotiana tabacum Nitab4.5_0000296g0100 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0000296 - View
Olea europaea Oeu057849.2 chr22 + View
Olea europaea Oeu003627.2 chr4 + View
Oryza sativa ssp. japonica Os09g0501600 Similar to MYC1. chr09 - View
Petunia axillaris Peaxi162Scf00054g00047 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00054 - View
Punica granatum PGR083G0931 NC_045133.1 + View
Punica granatum PGR044G1379 NC_045134.1 - View
Punica granatum PGR083G2231 NC_045133.1 + View
Prunus persica Prupe.8G193900 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Pp08 + View
Pisum sativum Psat3g150400 Helix-loop-helix DNA-binding domain chr3LG5 - View
Pisum sativum Psat4g205040 Helix-loop-helix DNA-binding domain chr4LG4 - View
Populus trichocarpa Potri.002G248500 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr02 - View
Phaseolus vulgaris Phvul.010G024800 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr10 - View
Phaseolus vulgaris Phvul.008G133600 PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr08 - View
Quercus lobata QL09p049143 9 + View
Rosa chinensis RcHm_v2.0_Chr6g0283511 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0050900 chr13 - View
Salix brachista Sabra02G0189200 GWHAAZH00000002 - View
Simmondsia chinensis Sc17g0001900 GWHAASQ00000017 + View
Sechium edule Sed0022716 LG09 + View
Sechium edule Sed0023888 LG07 + View
Solanum lycopersicum Solyc06g083170.3 bHLH transcription factor 049 SL4.0ch06 + View
Solanum lycopersicum Solyc09g097870.4 bHLH transcription factor 062 SL4.0ch09 - View
Solanum lycopersicum Solyc09g057710.4 bHLH transcription factor 057 SL4.0ch09 - View
Schrenkiella parvula Sp3g06280 PTHR12565//PTHR12565:SF154 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH62-RELATED ch3-1 - View
Schrenkiella parvula Sp2g18920 PTHR12565//PTHR12565:SF154 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH62-RELATED ch2-4 + View
Solanum pennellii Sopen09g035810 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch09 - View
Solanum pennellii Sopen09g021180 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch09 - View
Solanum pennellii Sopen06g034560 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400020807 Transcription factor ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400020174 Transcription factor ST4.03ch06 + View
Trochodendron aralioides TAR633G1563 group2 + View
Trochodendron aralioides TAR365G0615 group16 + View
Theobroma cacao Thecc.01G214900 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104818985 transcription factor bHLH62-like NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104804638 transcription factor bHLH78-like isoform X1 NW_010971390.1 - View
Tarenaya hassleriana THA.LOC104822477 transcription factor bHLH62-like NW_010966665.1 + View
Tripterygium wilfordii TWI18G1112 NC_052241.1 - View
Tripterygium wilfordii TWI36G1142 NC_052237.1 + View
Tripterygium wilfordii TWI75G0295 NC_052253.1 + View
Vaccinium macrocarpon vmacro14709 Similar to BHLH78: Transcription factor bHLH78 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02802 Similar to BHLH62: Transcription factor bHLH62 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G1096 CM024070.1 - View
Vigna mungo VMungo0331G0335 CM024078.1 - View