Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CSS0048353 | PREDICTED: disease resistance protein At4g27190-like [Malus domestica] | Chr4 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr3.2096 | chr3 | + | View | |
Acer truncatum | Atru.chr4.75 | chr4 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.63LVST | arahy.Tifrunner.gnm1.Arahy.03 | + | View | |
Beta vulgaris | EL10Ac1g01652 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | Chr1_EL10_PGA_scaffold3 | + | View |
Beta vulgaris | EL10Ac1g01244 | PTHR11439//PTHR11439:SF193 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | Chr1_EL10_PGA_scaffold3 | + | View |
Cannabis sativa | CANSAT25G1602 | NC_044370.1 | - | View | |
Eucalyptus grandis | Eucgr.F00519 | Chr06 | - | View | |
Eutrema salsugineum | Thhalv10029402m.g | 2.7.7.49 - RNA-directed DNA polymerase / Revertase | scaffold_3 | - | View |
Fragaria vesca | FvH4_5g37183 | PF00098//PF07727//PF14223 - Zinc knuckle (zf-CCHC) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2) | Fvb5 | - | View |
Manihot esculenta | Manes.02G152750 | Chromosome02 | + | View | |
Papaver somniferum | PSO447G0377 | NW_020621936.1 | + | View | |
Rhododendron simsii | Rhsim06G0083000 | chr06 | + | View | |
Salix brachista | Sabra07G0074400 | GWHAAZH00000007 | + | View | |
Salix brachista | Sabra05G0125000 | GWHAAZH00000005 | + | View | |
Solanum lycopersicum | Solyc04g073953.1 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3MN99_TRIPR) | SL4.0ch04 | - | View |
Solanum pennellii | Sopen04g029040 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 | Spenn-ch04 | - | View |
Solanum tuberosum | PGSC0003DMG400001902 | Hypothetical retrotransposon | ST4.03ch04 | - | View |