Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0035872 unnamed protein product [Vitis vinifera] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G10660 LG-1 - View
Acer truncatum Atru.chr5.663 chr5 + View
Actinidia chinensis Actinidia20240 Lachesis_group6 + View
Actinidia chinensis Actinidia10137 Lachesis_group0 - View
Arabidopsis lyrata AL1G11130 scaffold_1 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CF5AFL PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.369WQ5 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT1G01320 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1)%3B Has 12123 Blast hits to 4846 proteins in 494 species: Archae - 106%3B Bacteria - 3214%3B Metazoa - 4973%3B Fungi - 1823%3B Plants - 555%3B Viruses - 79%3B Other Eukaryotes - 1373 (source: NCBI BLink). Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). Chr1 - View
Amborella trichopoda ATR0602G163 AmTr_v1.0_scaffold00021 - View
Brassica carinata BcaB03g13573 ChrB03 - View
Brassica napus C05p00630 C05 + View
Brassica napus A10p00600 A10 + View
Brassica oleracea BolC5t28851H C5 + View
Brassica rapa BraA10t42338Z A10 + View
Beta vulgaris EL10Ac1g00272 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr1_EL10_PGA_scaffold3 - View
Cicer arietinum L. Ca_23537_v3 Ca_LG7_v3 - View
Corylus avellana Haze_15657 Similar to TSS: Protein TSS (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g39330 Tetratricopeptide repeat (TPR)-like superfamily protein chr2 + View
Citrus clementina Ciclev10018452m.g scaffold_3 - View
Ceratophyllum demersum CDE08G1208 6 - View
Carpinus fangiana Cfa003801 Cfa01 + View
Cardamine hirsuta CARHR001120 Tetratricopeptide repeat-containing protein Chr1 + View
Carya illinoinensis CiPaw.01G076500 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr01 - View
Carica papaya Cpa.g.sc96.11 supercontig_96 + View
Chenopodium quinoa AUR62023464 TSS: Protein TSS C_Quinoa_Scaffold_1606 - View
Chenopodium quinoa AUR62004489 TSS: Protein TSS C_Quinoa_Scaffold_4250 + View
Capsella rubella Carub.0001s0090 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN scaffold_1 + View
Daucus carota DCAR_005387 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_025251 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv35115 GWHABJS00000016 + View
Durio zibethinus Duzib133G1296 NW_019167938.1 + View
Erigeron canadensis ECA236G1465 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.D02374 Chr04 + View
Erythranthe guttata Migut.B01871 scaffold_2 + View
Eutrema salsugineum Thhalv10006538m.g scaffold_5 - View
Fragaria x ananassa FAN06G3722 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb7-2 + View
Fragaria x ananassa FAN06G3445 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb7-2 + View
Fragaria x ananassa FAN01G2109 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb7-4 - View
Fragaria x ananassa FAN03G3144 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb7-3 - View
Fragaria x ananassa FAN10G0149 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb7-1 + View
Fragaria x ananassa FAN10G2771 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb7-1 + View
Fragaria vesca FvH4_7g16420 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb7 + View
Gossypium hirsutum Gohir.A12G112100 K03255 - protein TIF31 (TIF31, CLU1) A12 + View
Gossypium hirsutum Gohir.A08G125300 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN A08 - View
Gossypium hirsutum Gohir.D12G115700 KOG1839 - Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 D12 + View
Glycine max Glyma.16G024600 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Gm16 - View
Glycine max Glyma.07G055900 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Gm07 - View
Gossypium raimondii Gorai.004G151800 Chr04 - View
Gossypium raimondii Gorai.008G125200 Chr08 + View
Lupinus albus Lalb_Chr15g0076271 K03255 - protein TIF31 (TIF31, CLU1) Lalb_Chr15 + View
Lotus japonicus Lj3g0006224 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN chr3 - View
Lonicera japonica Lj9C598G3 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_7_1141 Lsat_1_v8_lg_7 - View
Magnolia biondii MBI06_g08471_MAGBIO AED:0.10 Chr06 + View
Malus domestica MD07G1149400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr07 + View
Malus domestica MD01G1080500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr01 + View
Manihot esculenta Manes.05G023000 Chromosome05 - View
Medicago truncatula Medtr8g027685 eukaryotic translation initiation factor 3 subunit chr8 - View
Petunia axillaris Peaxi162Scf00786g00128 Tetratricopeptide repeat (TPR)-like superfamily protein Peaxi162Scf00786 - View
Petunia axillaris Peaxi162Scf00716g00016 Tetratricopeptide repeat (TPR)-like superfamily protein Peaxi162Scf00716 + View
Punica granatum PGR031G0972 NC_045127.1 - View
Prunus persica Prupe.2G188000 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Pp02 + View
Pisum sativum Psat4g161040 Translation initiation factor eIF3 subunit 135 chr4LG4 + View
Papaver somniferum PSO170G5166 NC_039360.1 + View
Papaver somniferum PSO063G3385 NC_039364.1 - View
Populus trichocarpa Potri.014G098600 PTHR12601//PTHR12601:SF17 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr14 + View
Populus trichocarpa Potri.006G180100 PTHR12601//PTHR12601:SF9 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT DOMAIN PROTEIN Chr06 - View
Populus trichocarpa Potri.002G170900 KOG1839 - Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 Chr02 + View
Phaseolus vulgaris Phvul.010G114100 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr10 + View
Phaseolus vulgaris Phvul.006G113000 Chr06 + View
Quercus lobata QL04p060935 4 - View
Rosa chinensis RcHm_v2.0_Chr1g0359431 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim07G0004400 chr07 - View
Striga asiatica SGA_v2.0_scaffold24G10700 scaffold24 + View
Salvia bowleyana SalBow3G2381 GWHASIU00000006 + View
Salix brachista Sabra02G0141600 GWHAAZH00000002 - View
Salix brachista Sabra14G0072200 GWHAAZH00000014 + View
Simmondsia chinensis Sc01g0002710 GWHAASQ00000001 - View
Solanum lycopersicum Solyc05g050630.4 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1QFM4_ARTAN) SL4.0ch05 - View
Solanum lycopersicum Solyc01g095900.4 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1QFM4_ARTAN) SL4.0ch01 + View
Schrenkiella parvula Sp1g00960 PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ch1-1 + View
Solanum pennellii Sopen05g029050 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein . Spenn-ch05 - View
Solanum pennellii Sopen01g039640 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein . Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400007038 Tetratricopeptide repeat (TPR)-containing protein ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400000108 Eukaryotic translation initiation factor 3 subunit ST4.03ch01 + View
Selenicereus undatus Hund27200 Scaffold_2055 - View
Selenicereus undatus Hund16711 Scaffold_33675 + View
Trochodendron aralioides TAR636G3487 group1 - View
Trochodendron aralioides TAR629G3253 group0 + View
Theobroma cacao Thecc.01G342900 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_1 - View
Trifolium pratense TPR.G9534 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI59G0604 NC_052248.1 - View
Tripterygium wilfordii TWI23G0337 NC_052239.1 + View
Tripterygium wilfordii TWI14G0654 NC_052249.1 - View
Vaccinium macrocarpon vmacro13182 Similar to TSS: Protein TSS (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G1222 CM024075.1 - View
Vigna mungo VMungo0331G1667 CM024078.1 - View
Vitis vinifera GSVIVG01027120001 chr15 - View