Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G7720 LG-7 - View
Acer truncatum Atru.chr11.2002 chr11 + View
Actinidia chinensis Actinidia01710 Lachesis_group10 - View
Arabidopsis lyrata AL1G37610 scaffold_1 - View
Aquilegia oxysepala Aqoxy3G00966 CHR03 + View
Aquilegia oxysepala Aqoxy3G03031 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JE1LMX K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SAQT9Y K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G23860 RS-containing zinc finger protein 21 Encodes a 9G8-like serine-arginine rich (SR) protein that interacts in vivo with U1-70K%2C a U1 small nuclear ribonucleoprotein 70-kDa protein that is involved in nuclear precursor mRNA processing. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010%2C 22:2926. RS-containing zinc finger protein 21 (RSZP21)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: nuclear mRNA splicing%2C via spliceosome%3B LOCATED IN: nuclear speck%2C nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C Zinc finger%2C CCHC-type (InterPro:IPR001878)%3B BEST Arabidopsis thaliana protein match is: serine/arginine-rich 22 (TAIR:AT4G31580.2)%3B Has 6291 Blast hits to 5531 proteins in 385 species: Archae - 0%3B Bacteria - 201%3B Metazoa - 3437%3B Fungi - 488%3B Plants - 1566%3B Viruses - 48%3B Other Eukaryotes - 551 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g32360 ChrB07 - View
Brassica napus C05p23060 C05 - View
Brassica rapa BraA09t39586Z A09 + View
Beta vulgaris EL10Ac6g13653 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT01G3233 NC_044373.1 + View
Cicer arietinum L. Ca_22744_v3 Ca_LG7_v3 - View
Corylus avellana Haze_12145 Similar to RSZ23: Serine/arginine-rich splicing factor RSZ23 (Oryza sativa subsp. japonica OX%3D39947) 9 - View
Coffea canephora Cc11_g14520 Serine/arginine-rich splicing factor RSZ21 chr11 + View
Citrus clementina Ciclev10032693m.g scaffold_4 - View
Cardamine hirsuta CARHR024260 Arginine/serine-rich splicing factor, putative Chr1 - View
Carya illinoinensis CiPaw.05G146800 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Chr05 - View
Citrullus lanatus ClCG05G025210 Arginine/serine-rich splicing factor, putative CG_Chr05 + View
Cucumis melo MELO3C012008.2 serine/arginine-rich splicing factor RSZ21 chr10 + View
Carica papaya Cpa.g.sc69.10 supercontig_69 + View
Chenopodium quinoa AUR62014008 RSZ21A: Serine/arginine-rich splicing factor RSZ21A C_Quinoa_Scaffold_3035 + View
Chenopodium quinoa AUR62005355 RSZP21: Serine/arginine-rich splicing factor RSZ21 C_Quinoa_Scaffold_1214 + View
Capsella rubella Carub.0001s2335 scaffold_1 - View
Cucumis sativus L. CsaV3_5G031680 Serine/arginine-rich splicing factor like chr5 - View
Daucus carota DCAR_024140 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv24875 GWHABJS00000018 - View
Durio zibethinus Duzib268G0305 NW_019168270.1 + View
Erigeron canadensis ECA234G3942 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA233G4618 Conyza_canadensis_scaffold:1 - View
Eutrema salsugineum Thhalv10008869m.g K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) scaffold_5 + View
Fragaria x ananassa FAN22G0415 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Fvb4-1 - View
Fragaria x ananassa FAN17G0899 PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) Fvb4-2 + View
Fragaria x ananassa FAN07G0635 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb4-4 + View
Fragaria x ananassa FAN12G1322 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Fvb4-3 + View
Fragaria vesca FvH4_4g34770 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Fvb4 - View
Gossypium hirsutum Gohir.D02G163600 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) D02 - View
Gossypium hirsutum Gohir.A03G140800 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) A03 - View
Glycine max Glyma.18G136900 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Gm18 + View
Glycine max Glyma.08G288300 PTHR23147//PTHR23147:SF1//PTHR24012 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED // FAMILY NOT NAMED Gm08 - View
Gossypium raimondii Gorai.005G183600 Chr05 - View
Lotus japonicus Lj4g0006026 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) chr4 - View
Lonicera japonica Lj6A804T65 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_4_6320 Lsat_1_v8_lg_4 + View
Malus domestica MD16G1090200 RS-containing zinc finger protein 21 Chr16 + View
Malus domestica MD13G1089900 RS-containing zinc finger protein 21 Chr13 + View
Manihot esculenta Manes.12G030500 Chromosome12 - View
Manihot esculenta Manes.13G031600 Chromosome13 - View
Nelumbo nucifera Nn4g22828 chr4 - View
Nicotiana tabacum Nitab4.5_0000113g0010 RNA recognition motif domain, Zinc finger, CCHC-type, Nucleotide-binding, alpha-beta plait Nitab4.5_0000113 + View
Prunus persica Prupe.1G255900 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) Pp01 - View
Pisum sativum Psat4g124760 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr4LG4 - View
Papaver somniferum PSO017G0839 NC_039362.1 - View
Papaver somniferum PSO832G3145 NC_039367.1 - View
Papaver somniferum PSO063G7382 NC_039364.1 - View
Quercus lobata QL03p061754 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0444111 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0047700 chr12 - View
Simmondsia chinensis Sc04g0009060 GWHAASQ00000004 - View
Sechium edule Sed0014750 LG06 + View
Schrenkiella parvula Sp1g21210 K12896 - splicing factor, arginine/serine-rich 7 (SFRS7) ch1-1 - View
Selenicereus undatus Hund25338 Scaffold_3410 + View
Trochodendron aralioides TAR374G0412 group12 + View
Trochodendron aralioides TAR622G1121 group8 + View
Trochodendron aralioides TAR629G1957 group0 + View
Theobroma cacao Thecc.02G245000 RS-containing zinc finger protein 21 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104822134 serine/arginine-rich splicing factor RSZ21 isoform X1 NW_010966617.1 + View
Tripterygium wilfordii TWI18G0921 NC_052241.1 + View
Tripterygium wilfordii TWI75G1551 NC_052253.1 - View
Vaccinium macrocarpon vmacro01186 Similar to RSZ23: Serine/arginine-rich splicing factor RSZ23 (Oryza sativa subsp. japonica OX%3D39947) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01020220001 chr1 - View