Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0042098 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Populus euphratica] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G7440 LG-7 + View
Acer truncatum Atru.chr11.2063 chr11 - View
Actinidia chinensis Actinidia13496 Lachesis_group16 + View
Actinidia chinensis Actinidia15061 Lachesis_group12 - View
Arabidopsis lyrata AL1G37200 scaffold_1 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.077R6R K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT1G23410 Ribosomal protein S27a / Ubiquitin family protein Ribosomal protein S27a / Ubiquitin family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: protein ubiquitination involved in ubiquitin-dependent protein catabolic process%2C translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C plasma membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956)%2C Ribosomal protein S27a (InterPro:IPR002906)%2C Ubiquitin conserved site (InterPro:IPR019954)%2C Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: ubiquitin 6 (TAIR:AT2G47110.2)%3B Has 12704 Blast hits to 7404 proteins in 782 species: Archae - 114%3B Bacteria - 22%3B Metazoa - 5540%3B Fungi - 1414%3B Plants - 3101%3B Viruses - 186%3B Other Eukaryotes - 2327 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB03g11938 ChrB03 + View
Brassica carinata BcaB07g32339 ChrB07 + View
Brassica carinata BcaB03g14150 ChrB03 - View
Brassica carinata BcaC06g35035 ChrC06 + View
Brassica carinata BcaC05g26260 ChrC05 + View
Brassica napus A08p28170 A08 - View
Brassica napus C05p22710 C05 + View
Brassica oleracea BolC7t42569H C7 - View
Brassica rapa BraA07t29144Z A07 - View
Cannabis sativa CANSAT01G0173 NC_044373.1 - View
Cicer arietinum L. Ca_03141_v3 Ca_LG1_v3 + View
Citrus clementina Ciclev10032969m.g scaffold_4 + View
Cardamine hirsuta CARHR023850 ubiquitin 6 Chr1 + View
Carya illinoinensis CiPaw.04G026900 K02977//K08770 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) Chr04 - View
Carya illinoinensis CiPaw.06G070200 K02977//K08770 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) Chr06 + View
Carya illinoinensis CiPaw.05G186300 K02977//K08770 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) Chr05 - View
Carya illinoinensis CiPaw.03G041000 K02977//K08770 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) Chr03 - View
Citrullus lanatus ClCG08G017880 Ubiquitin, putative CG_Chr08 + View
Citrullus lanatus ClCG05G025470 Ubiquitin, putative CG_Chr05 - View
Cucumis melo MELO3C011983.2 Ubiquitin, putative chr10 - View
Corchorus olitorius COL.COLO4_24211 Ubiquitin AWUE01018461.1 - View
Carica papaya Cpa.g.sc69.73 supercontig_69 - View
Capsella rubella Carub.0001s2299 K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) scaffold_1 + View
Cucumis sativus L. CsaV3_5G031430 Ubiquitin-40S ribosomal protein S27a chr5 + View
Cucumis sativus L. CsaV3_2G024750 Ubiquitin-40S ribosomal protein S27a chr2 - View
Davidia involucrata Dinv24822 GWHABJS00000018 + View
Davidia involucrata Dinv15271 GWHABJS00000008 - View
Durio zibethinus Duzib251G0806 NW_019167971.1 - View
Durio zibethinus Duzib268G1039 NW_019168270.1 - View
Durio zibethinus Duzib248G1421 NW_019168048.1 + View
Erigeron canadensis ECA233G4595 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.B03309 Chr02 - View
Eutrema salsugineum Thhalv10008988m.g K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) scaffold_5 - View
Glycine max Glyma.02G036000 K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) Gm02 + View
Glycine max Glyma.01G029200 K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) Gm01 + View
Helianthus annuus HanXRQChr17g0569881 Probable ubiquitin-40S ribosomal protein S27a HanXRQChr17 - View
Helianthus annuus HanXRQChr12g0383641 Probable ubiquitin-40S ribosomal protein S27a HanXRQChr12 - View
Helianthus annuus HanXRQChr08g0208601 Putative ubiquitin-related domain HanXRQChr08 + View
Helianthus annuus HanXRQChr12g0371591 Putative zinc-binding ribosomal protein; Ubiquitin; Ubiquitin-related domain HanXRQChr12 - View
Hydrangea macrophylla Hma1.2p1_0160F.1_g071070 Hma1.2p1_0160F.1 - View
Lupinus albus Lalb_Chr16g0382161 K02977//K08770 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) Lalb_Chr16 + View
Lupinus albus Lalb_Chr09g0326301 K02977//K08770 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) Lalb_Chr09 + View
Lupinus albus Lalb_Chr05g0216741 K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) Lalb_Chr05 + View
Lotus japonicus Lj2g0024877 K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) chr2 + View
Lonicera japonica Lj6P807T84 GWHAAZE00000006 - View
Malus domestica MD13G1094800 ubiquitin 6 Chr13 + View
Malus domestica MD16G1095800 ubiquitin 6 Chr16 + View
Manihot esculenta Manes.12G026400 Chromosome12 + View
Manihot esculenta Manes.13G028100 Chromosome13 + View
Medicago truncatula Medtr5g033960 ubiquitin-40S ribosomal S27a-like protein chr5 + View
Nelumbo nucifera Nn4g22717 chr4 + View
Nelumbo nucifera Nn3g16824 chr3 + View
Punica granatum PGR119G0035 NC_045132.1 - View
Prunus persica Prupe.1G250600 K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) Pp01 - View
Papaver somniferum PSO478G0794 NC_039361.1 - View
Papaver somniferum PSO017G6873 NC_039362.1 - View
Phaseolus vulgaris Phvul.002G065000 K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) Chr02 + View
Quercus lobata QL02p075627 CM012294 + View
Quercus lobata QL03p059278 3 + View
Rhododendron simsii Rhsim12G0114200 chr12 + View
Sechium edule Sed0019108 LG04 + View
Sechium edule Sed0006670 LG06 - View
Schrenkiella parvula Sp1g20850 K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) ch1-1 + View
Trochodendron aralioides TAR629G0452 group0 - View
Theobroma cacao Thecc.02G254300 Ribosomal protein S27a / Ubiquitin family protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104822973 ubiquitin-40S ribosomal protein S27a-1 NW_010966822.1 - View
Tripterygium wilfordii TWI18G1365 NC_052241.1 - View
Tripterygium wilfordii TWI36G1042 NC_052237.1 + View
Vigna mungo VMungo1215G0939 CM024074.1 + View