Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0044577 hypothetical protein POPTR_0010s10190g [Populus trichocarpa] Chr5 + View
CSS0029817 Uncharacterized protein TCM_004392 [Theobroma cacao] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G10420 LG-11 + View
Aethionema arabicum Aa31LG5G16500 LG-5 + View
Acer truncatum Atru.chr5.1433 chr5 - View
Acer truncatum Atru.chr4.2524 chr4 + View
Actinidia chinensis Actinidia08505 Lachesis_group18 + View
Actinidia chinensis Actinidia23497 Lachesis_group3 + View
Actinidia chinensis Actinidia09140 Lachesis_group24 + View
Actinidia chinensis Actinidia40162 Lachesis_group22 - View
Actinidia chinensis Actinidia00749 Lachesis_group19 + View
Actinidia chinensis Actinidia36983 Lachesis_group10 + View
Arabidopsis lyrata AL1G12660 scaffold_1 + View
Arabidopsis lyrata AL3G16840 scaffold_3 + View
Arabidopsis lyrata AL6G30720 scaffold_6 - View
Avicennia marina MSTRG.10002 ScioBoG_12795_HRSCAF_12848 + View
Avicennia marina MSTRG.24751 ScioBoG_4088_HRSCAF_4107 + View
Aquilegia oxysepala Aqoxy5G00506 CHR05 + View
Aquilegia oxysepala Aqoxy2G03325 CHR02 - View
Arabidopsis thaliana AT3G06020 FANTASTIC four-like protein (DUF3049) A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1)%2C AT1G03170 (FAF2)%2C AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS%2C which ultimately leads to an arrest of meristem activity in FAF overexpressing lines. Protein of unknown function (DUF3049)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT5G19260.1)%3B Has 5181 Blast hits to 1744 proteins in 177 species: Archae - 19%3B Bacteria - 80%3B Metazoa - 2761%3B Fungi - 308%3B Plants - 233%3B Viruses - 99%3B Other Eukaryotes - 1681 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G03170 FANTASTIC four-like protein (DUF3049) A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1)%2C AT1G03170 (FAF2)%2C AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS%2C which ultimately leads to an arrest of meristem activity in FAF overexpressing lines. Protein of unknown function (DUF3049)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1)%3B Has 91 Blast hits to 91 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 89%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT5G19260 FANTASTIC four-like protein (DUF3049) A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1)%2C AT1G03170 (FAF2)%2C AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS%2C which ultimately leads to an arrest of meristem activity in FAF overexpressing lines. Protein of unknown function (DUF3049)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT3G06020.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC04g18586 ChrC04 + View
Brassica carinata BcaB08g36590 ChrB08 + View
Brassica carinata BcaC03g13658 ChrC03 - View
Brassica carinata BcaC05g30068 ChrC05 - View
Brassica napus C09p57020 C09 + View
Brassica napus A02p05360 A02 - View
Brassica napus A03p34460 A03 + View
Brassica napus A05p42000 A05 - View
Brassica napus A10p20410 A10 + View
Brassica napus C05p61240 C05 - View
Brassica oleracea BolC9t58558H C9 + View
Brassica oleracea BolC2t06950H C2 - View
Brassica oleracea BolC5t34784H C5 - View
Brassica rapa BraA02t05494Z A02 - View
Brassica rapa BraA10t44111Z A10 + View
Brassica rapa BraA05t22921Z A05 - View
Cannabis sativa CANSAT78G0215 NC_044376.1 - View
Cannabis sativa CANSAT25G2825 NC_044370.1 - View
Cicer arietinum L. Ca_24375_v3 Ca_LG8_v3 - View
Corylus avellana Haze_04713 Similar to FAF3: Protein FANTASTIC FOUR 3 (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_00938 Similar to FAF3: Protein FANTASTIC FOUR 3 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc03_g03370 Putative Protein FANTASTIC FOUR 2 chr3 - View
Citrus clementina Ciclev10005417m.g scaffold_9 - View
Citrus clementina Ciclev10021186m.g scaffold_3 + View
Carpinus fangiana Cfa006135 Cfa02 - View
Carpinus fangiana Cfa015607 Cfa06 - View
Cardamine hirsuta CARHR080520 Protein of unknown function (DUF3049) Chr3 + View
Cardamine hirsuta CARHR193700 Protein of unknown function (DUF3049) Chr6 + View
Carya illinoinensis CiPaw.07G091300 PF11250 - Fantastic Four meristem regulator (FAF) Chr07 - View
Carya illinoinensis CiPaw.01G162700 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED Chr01 - View
Carya illinoinensis CiPaw.02G094400 PTHR33155//PTHR33155:SF4 - FAMILY NOT NAMED // PROTEIN FANTASTIC FOUR 3-RELATED Chr02 - View
Citrullus lanatus ClCG06G005960 Protein FANTASTIC FOUR 3 CG_Chr06 - View
Cucumis melo MELO3C015838.2 Protein FANTASTIC FOUR 2 chr01 + View
Cucumis melo MELO3C006550.2 Protein FANTASTIC FOUR 4 chr06 - View
Corchorus olitorius COL.COLO4_09100 hypothetical protein AWUE01014114.1 + View
Capsella rubella Carub.0003s0544 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED scaffold_3 + View
Capsella rubella Carub.0001s0231 PTHR33155//PTHR33155:SF3 - FAMILY NOT NAMED // PROTEIN FAF-LIKE, CHLOROPLASTIC-RELATED scaffold_1 + View
Capsella rubella Carub.0006s1759 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED scaffold_6 - View
Cucumis sativus L. CsaV3_3G013540 protein FANTASTIC FOUR 4 chr3 - View
Cucumis sativus L. CsaV3_6G038310 protein FANTASTIC FOUR 3 chr6 + View
Daucus carota DCAR_027170 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_012473 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_030614 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_002399 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv38413 GWHABJS00000016 + View
Davidia involucrata Dinv44502 GWHABJS00000014 + View
Durio zibethinus Duzib211G0127 NW_019168049.1 - View
Durio zibethinus Duzib151G0714 NW_019167904.1 - View
Durio zibethinus Duzib133G0996 NW_019167938.1 - View
Durio zibethinus Duzib212G0111 NW_019168026.1 + View
Durio zibethinus Duzib138G1156 NW_019167893.1 - View
Erigeron canadensis ECA240G3199 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA236G2824 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.H03564 Chr08 + View
Eucalyptus grandis Eucgr.B01102 Chr02 + View
Erythranthe guttata Migut.G00312 scaffold_7 - View
Eutrema salsugineum Thhalv10015905m.g PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED scaffold_2 - View
Eutrema salsugineum Thhalv10022430m.g PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED scaffold_13 - View
Eutrema salsugineum Thhalv10008552m.g PTHR33155:SF3 - PROTEIN FAF-LIKE, CHLOROPLASTIC-RELATED scaffold_5 - View
Fragaria x ananassa FAN27G3210 PF11250 - Fantastic Four meristem regulator (FAF) Fvb2-1 + View
Fragaria x ananassa FAN24G3176 PF11250 - Fantastic Four meristem regulator (FAF) Fvb2-2 - View
Fragaria x ananassa FAN12G2450 PTHR33155//PTHR33155:SF4 - FAMILY NOT NAMED // PROTEIN FANTASTIC FOUR 3-RELATED Fvb4-3 + View
Fragaria x ananassa FAN17G2206 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED Fvb4-2 - View
Fragaria x ananassa FAN20G3052 PF11250 - Fantastic Four meristem regulator (FAF) Fvb2-3 - View
Fragaria x ananassa FAN22G2240 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED Fvb4-1 + View
Fragaria x ananassa FAN07G1906 PTHR33155//PTHR33155:SF4 - FAMILY NOT NAMED // PROTEIN FANTASTIC FOUR 3-RELATED Fvb4-4 - View
Fragaria x ananassa FAN15G2811 PF11250 - Fantastic Four meristem regulator (FAF) Fvb2-4 + View
Fragaria vesca FvH4_2g23620 PF11250 - Fantastic Four meristem regulator (FAF) Fvb2 + View
Fragaria vesca FvH4_4g14940 PTHR33155//PTHR33155:SF4 - FAMILY NOT NAMED // PROTEIN FANTASTIC FOUR 3-RELATED Fvb4 - View
Gossypium hirsutum Gohir.D09G216300 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED D09 - View
Gossypium hirsutum Gohir.D08G076000 PF11250 - Fantastic Four meristem regulator (FAF) D08 + View
Gossypium hirsutum Gohir.A12G005200 PF11250 - Fantastic Four meristem regulator (FAF) A12 + View
Gossypium hirsutum Gohir.D12G004700 PF11250 - Fantastic Four meristem regulator (FAF) D12 + View
Gossypium hirsutum Gohir.A09G213800 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED A09 - View
Glycine max Glyma.20G143000 PF11250 - Fantastic Four meristem regulator (FAF) Gm20 - View
Glycine max Glyma.10G250700 PF11250 - Fantastic Four meristem regulator (FAF) Gm10 + View
Glycine max Glyma.03G153400 PF11250 - Fantastic Four meristem regulator (FAF) Gm03 - View
Glycine max Glyma.02G147500 PF11250 - Fantastic Four meristem regulator (FAF) Gm02 + View
Glycine max Glyma.01G239800 PF11250 - Fantastic Four meristem regulator (FAF) Gm01 + View
Glycine max Glyma.11G003900 PF11250 - Fantastic Four meristem regulator (FAF) Gm11 - View
Glycine max Glyma.19G155800 PF11250 - Fantastic Four meristem regulator (FAF) Gm19 - View
Glycine max Glyma.10G026300 PF11250 - Fantastic Four meristem regulator (FAF) Gm10 - View
Gossypium raimondii Gorai.008G004600 Chr08 + View
Gossypium raimondii Gorai.006G236700 Chr06 - View
Gossypium raimondii Gorai.007G136700 Chr07 - View
Lupinus albus Lalb_Chr06g0163011 PF11250 - Fantastic Four meristem regulator (FAF) Lalb_Chr06 + View
Lupinus albus Lalb_Chr09g0319701 PF11250 - Fantastic Four meristem regulator (FAF) Lalb_Chr09 - View
Lotus japonicus Lj5g0001986 PF11250 - Fantastic Four meristem regulator (FAF) chr5 - View
Lotus japonicus Lj1g0027615 PF11250 - Fantastic Four meristem regulator (FAF) chr1 + View
Lotus japonicus Lj1g0015154 PF11250 - Fantastic Four meristem regulator (FAF) chr1 + View
Lonicera japonica Lj3P741T21 GWHAAZE00000003 + View
Lonicera japonica Lj2P1173T12 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_7_66720 PF11250 - Fantastic Four meristem regulator (FAF) Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_5_188280 PF11250 - Fantastic Four meristem regulator (FAF) Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_8_56341 PF11250 - Fantastic Four meristem regulator (FAF) Lsat_1_v8_lg_8 - View
Malus domestica MD03G1265600 Protein of unknown function (DUF3049) Chr03 + View
Malus domestica MD11G1286200 Protein of unknown function (DUF3049) Chr11 + View
Malus domestica MD13G1186600 Protein of unknown function (DUF3049) Chr13 - View
Malus domestica MD16G1187300 Protein of unknown function (DUF3049) Chr16 - View
Manihot esculenta Manes.03G181900 Chromosome03 + View
Manihot esculenta Manes.15G025700 Chromosome15 - View
Manihot esculenta Manes.05G076000 Chromosome05 - View
Manihot esculenta Manes.01G207900 Chromosome01 + View
Medicago truncatula Medtr5g005770 fantastic four-like protein chr5 - View
Medicago truncatula Medtr1g105075 fantastic four-like protein chr1 - View
Medicago truncatula Medtr7g094830 DUF3049 family protein chr7 - View
Nicotiana tabacum Nitab4.5_0000630g0170 The fantastic four family Nitab4.5_0000630 - View
Olea europaea Oeu004491.1 chr20 + View
Punica granatum PGR142G1445 NC_045128.1 - View
Punica granatum PGR004G0344 NC_045131.1 - View
Prunus persica Prupe.1G154300 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED Pp01 - View
Prunus persica Prupe.8G241400 PF11250 - Fantastic Four meristem regulator (FAF) Pp08 + View
Pisum sativum Psat4g211120 Fantastic Four meristem regulator chr4LG4 - View
Papaver somniferum PSO832G4048 NC_039367.1 + View
Papaver somniferum PSO210G4597 NC_039359.1 + View
Populus trichocarpa Potri.002G053400 PF11250 - Fantastic Four meristem regulator (FAF) Chr02 + View
Populus trichocarpa Potri.005G209100 PF11250 - Fantastic Four meristem regulator (FAF) Chr05 - View
Populus trichocarpa Potri.010G091800 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED Chr10 + View
Populus trichocarpa Potri.008G149600 PTHR33155:SF4 - PROTEIN FANTASTIC FOUR 3-RELATED Chr08 - View
Phaseolus vulgaris Phvul.001G150800 PF11250 - Fantastic Four meristem regulator (FAF) Chr01 - View
Phaseolus vulgaris Phvul.002G047700 PF11250 - Fantastic Four meristem regulator (FAF) Chr02 + View
Phaseolus vulgaris Phvul.007G171900 PF11250 - Fantastic Four meristem regulator (FAF) Chr07 + View
Phaseolus vulgaris Phvul.007G053800 PF11250 - Fantastic Four meristem regulator (FAF) Chr07 - View
Quercus lobata QL12p021926 12 + View
Quercus lobata QL06p003612 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0291081 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr4g0417161 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim02G0022200 chr02 - View
Rhododendron simsii Rhsim13G0024500 chr13 - View
Rhododendron simsii Rhsim04G0204100 chr04 - View
Striga asiatica SGA_v2.0_scaffold39G15299 scaffold39 + View
Striga asiatica SGA_v2.0_scaffold1G00470 scaffold1 - View
Salvia bowleyana SalBow6G1282 GWHASIU00000002 - View
Salvia bowleyana SalBow4G2473 GWHASIU00000008 - View
Salvia bowleyana SalBow2G0923 GWHASIU00000007 + View
Salix brachista Sabra02G0043500 GWHAAZH00000002 + View
Salix brachista Sabra08G0113700 GWHAAZH00000008 - View
Simmondsia chinensis Sc13g0004160 GWHAASQ00000013 - View
Sechium edule Sed0010927 LG09 + View
Sechium edule Sed0008439 LG04 - View
Sechium edule Sed0014733 LG02 - View
Sechium edule Sed0020706 LG12 + View
Solanum lycopersicum Solyc09g065140.1 Fantastic four-like protein (AHRD V3.3 *** A0A2K3NF15_TRIPR) SL4.0ch09 - View
Schrenkiella parvula Sp6g25150 PTHR33155//PTHR33155:SF4 - FAMILY NOT NAMED // PROTEIN FANTASTIC FOUR 3-RELATED ch6-6 + View
Schrenkiella parvula Sp3g04960 PTHR33155//PTHR33155:SF4 - FAMILY NOT NAMED // PROTEIN FANTASTIC FOUR 3-RELATED ch3-1 + View
Schrenkiella parvula Sp1g02190 PTHR33155//PTHR33155:SF3 - FAMILY NOT NAMED // PROTEIN FAF-LIKE, CHLOROPLASTIC-RELATED ch1-1 + View
Solanum pennellii Sopen01g031500 Protein of unknown function (DUF3049) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400012882 Conserved gene of unknown function ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400009028 Conserved gene of unknown function ST4.03ch01 - View
Selenicereus undatus Hund12169 Scaffold_33679 + View
Trochodendron aralioides TAR633G0419 group2 + View
Trochodendron aralioides TAR362G0629 group17 - View
Trochodendron aralioides TAR636G1608 group1 - View
Trochodendron aralioides TAR365G0527 group16 - View
Theobroma cacao Thecc.01G279800 Uncharacterized protein Chromosome_1 + View
Theobroma cacao Thecc.04G226200 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104823091 protein FANTASTIC FOUR 2-like NW_010966822.1 - View
Tarenaya hassleriana THA.LOC104801234 protein FANTASTIC FOUR 1 NW_010969548.1 - View
Trifolium pratense TPR.G5460 Tp57577_TGAC_v2_LG1 + View
Trifolium pratense TPR.G38020 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI59G0570 NC_052248.1 - View
Tripterygium wilfordii TWI73G1145 NC_052232.1 - View
Tripterygium wilfordii TWI09G1192 NC_052245.1 - View
Utricularia gibba unitig_32.g10808 unitig_32 - View
Vaccinium macrocarpon vmacro02568 Similar to FAF2: Protein FANTASTIC FOUR 2 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0888 CM024071.1 - View
Vigna mungo VMungo1383G0841 CM024070.1 - View
Vigna mungo VMungo0720G2733 CM024071.1 + View
Vitis vinifera GSVIVG01017917001 chr5 - View