Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0034518 Ralf-like 33, putative [Theobroma cacao] Chr13 + View
CSS0039658 PREDICTED: rapid alkalinization factor-like [Cicer arietinum] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G6310 LG-10 - View
Aethionema arabicum Aa31LG1G9660 LG-1 + View
Aethionema arabicum Aa31LG5G15910 LG-5 - View
Aethionema arabicum Aa31LG11G9450 LG-11 + View
Acer truncatum Atru.chr4.2834 chr4 + View
Acer truncatum Atru.chr2.27 chr2 + View
Acer truncatum Atru.chr5.1183 chr5 - View
Actinidia chinensis Actinidia35563 Lachesis_group2 - View
Arabidopsis lyrata AL6G39280 scaffold_6 - View
Arabidopsis lyrata AL3G16090 scaffold_3 + View
Avicennia marina MSTRG.27981 ScioBoG_94932_HRSCAF_95134 + View
Avicennia marina MSTRG.18168 ScioBoG_22153_HRSCAF_22259 - View
Avicennia marina MSTRG.20420 ScioBoG_26180_HRSCAF_26306 - View
Amaranthus hybridus Ah.06g189750 Rapid alkalinization factor (NtRALF) AmaHy_arrow1_Scaffold_6 + View
Amaranthus hybridus Ah.04g161110 AmaHy_arrow1_Scaffold_4 + View
Aquilegia oxysepala Aqoxy5G00719 CHR05 + View
Aquilegia oxysepala Aqoxy2G02986 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5C4XQ1 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT3G05490 ralf-like 22 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF)%2C and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 22 (RALFL22)%3B CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801)%3B BEST Arabidopsis thaliana protein match is: ralf-like 33 (TAIR:AT4G15800.1)%3B Has 266 Blast hits to 266 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 264%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0796G076 AmTr_v1.0_scaffold00045 + View
Brassica carinata BcaB04g19263 ChrB04 - View
Brassica carinata BcaC04g23641 ChrC04 + View
Brassica carinata BcaC09g47828 ChrC09 + View
Brassica carinata BcaC05g30117 ChrC05 - View
Brassica napus C05p61740 C05 - View
Brassica napus A03p34150 A03 + View
Brassica napus BNapus_Darmor_BZH_scaffold_114p00060 BNapus_Darmor_BZH_scaffold_114 - View
Brassica napus C09p05880 C09 + View
Brassica napus C03p41540 C03 + View
Brassica napus A09p05400 A09 + View
Brassica oleracea BolC9t53514H C9 + View
Brassica oleracea BolC3t16435H C3 + View
Brassica oleracea BolC5t34832H C5 - View
Brassica oleracea BolC1t05693H C1 - View
Brassica rapa BraA03t12589Z A03 + View
Brassica rapa BraSC132t45502Z Brapa_scaffold_132 - View
Brassica rapa BraA09t36178Z A09 + View
Brassica rapa BraA05t23036Z A05 + View
Beta vulgaris EL10Ac4g09919 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr4_EL10_PGA_scaffold1 - View
Capsicum annuum CAN.G339.33 PGAv.1.6.scaffold339 - View
Cannabis sativa CANSAT54G2300 NC_044375.1 + View
Cicer arietinum L. Ca_05802_v3 Ca_LG2_v3 - View
Cicer arietinum L. Ca_10128_v3 Ca_LG4_v3 + View
Corylus avellana Haze_04143 Similar to RALFL33: Protein RALF-like 33 (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_01205 Similar to RALFL33: Protein RALF-like 33 (Arabidopsis thaliana OX%3D3702) 1 - View
Corylus avellana Haze_04895 Similar to RALFL33: Protein RALF-like 33 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc03_g01950 ralf-like 33 chr3 - View
Coffea canephora Cc01_g20640 ralf-like 33 chr1 + View
Citrus clementina Ciclev10002897m.g scaffold_5 + View
Citrus clementina Ciclev10006201m.g scaffold_9 - View
Citrus clementina Ciclev10023750m.g scaffold_3 + View
Ceratophyllum demersum CDE01G0653 11 + View
Ceratophyllum demersum CDE12G0954 10 + View
Carpinus fangiana Cfa005951 Cfa02 - View
Carpinus fangiana Cfa006625 Cfa02 + View
Cardamine hirsuta CARHR002250 rapid alkalinization factor 1 Chr1 - View
Cardamine hirsuta CARHR079880 Rapid alkalinization factor 1 Chr3 + View
Carya illinoinensis CiPaw.07G106300 PF05498 - Rapid ALkalinization Factor (RALF) (RALF) Chr07 + View
Carya illinoinensis CiPaw.08G097500 PF05498 - Rapid ALkalinization Factor (RALF) (RALF) Chr08 - View
Carya illinoinensis CiPaw.08G162200 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr08 - View
Carya illinoinensis CiPaw.07G021200 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr07 + View
Carya illinoinensis CiPaw.01G148800 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Chr01 - View
Citrullus lanatus ClCG02G015440 Rapid alkalinization factor 1 CG_Chr02 - View
Citrullus lanatus ClCG06G005140 Rapid alkalinization factor CG_Chr06 - View
Cucumis melo MELO3C016020.2 Rapid alkalinization factor chr01 - View
Cucumis melo MELO3C004224.2 Rapid alkalinization factor chr05 - View
Corchorus olitorius COL.COLO4_10515 Rapid ALkalinization Factor AWUE01014526.1 + View
Carica papaya Cpa.g.sc9.207 supercontig_9 + View
Carica papaya Cpa.g.sc48.92 supercontig_48 + View
Chenopodium quinoa AUR62005200 RALFL19: Protein RALF-like 19 C_Quinoa_Scaffold_3820 + View
Chenopodium quinoa AUR62000768 RALF1: Protein RALF-like 1 C_Quinoa_Scaffold_2088 - View
Capsella rubella Carub.0006s2487 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED scaffold_6 - View
Capsella rubella Carub.0007s2586 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED scaffold_7 - View
Capsella rubella Carub.0001s0203 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED scaffold_1 - View
Capsella rubella Carub.0003s0478 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 scaffold_3 + View
Cucumis sativus L. CsaV3_6G017190 Rapid ALkalinization Factor chr6 - View
Cucumis sativus L. CsaV3_2G006630 Rapid ALkalinization Factor chr2 + View
Daucus carota DCAR_024569 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_022149 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_030529 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_003353 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_002812 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv40341 GWHABJS00000005 + View
Davidia involucrata Dinv30805 GWHABJS00000002 + View
Davidia involucrata Dinv44382 GWHABJS00000014 + View
Durio zibethinus Duzib052G0676 NW_019167849.1 + View
Durio zibethinus Duzib151G0725 NW_019167904.1 + View
Durio zibethinus Duzib177G0542 NW_019168004.1 + View
Durio zibethinus Duzib211G0580 NW_019168049.1 + View
Durio zibethinus Duzib138G0285 NW_019167893.1 - View
Durio zibethinus Duzib128G0017 NW_019168481.1 - View
Durio zibethinus Duzib133G0092 NW_019167938.1 - View
Erigeron canadensis ECA236G3542 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.B01916 Chr02 - View
Eucalyptus grandis Eucgr.H04532 Chr08 + View
Eucalyptus grandis Eucgr.K03464 Chr11 + View
Erythranthe guttata Migut.N02079 scaffold_14 - View
Eutrema salsugineum Thhalv10009124m.g PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED scaffold_5 + View
Eutrema salsugineum Thhalv10005147m.g PTHR33136:SF13 - PROTEIN RALF-LIKE 22 scaffold_6 - View
Eutrema salsugineum Thhalv10021783m.g PTHR33136:SF13 - PROTEIN RALF-LIKE 22 scaffold_13 - View
Fragaria x ananassa FAN17G2655 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Fvb4-2 - View
Fragaria x ananassa FAN20G0886 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Fvb2-3 - View
Fragaria x ananassa FAN02G3643 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Fvb6-4 + View
Fragaria x ananassa FAN14G5330 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Fvb6-1 - View
Fragaria x ananassa FAN27G0851 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Fvb2-1 - View
Fragaria x ananassa FAN24G3138 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Fvb2-2 - View
Fragaria vesca FvH4_4g18001 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Fvb4 + View
Fragaria vesca FvH4_6g06520 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D11G277700 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED D11 + View
Gossypium hirsutum Gohir.A02G049200 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 A02 + View
Gossypium hirsutum Gohir.A08G208700 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED A08 - View
Gossypium hirsutum Gohir.A10G163900 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 A10 + View
Gossypium hirsutum Gohir.D08G225600 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED D08 - View
Gossypium hirsutum Gohir.D02G054300 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 D02 + View
Gossypium hirsutum Gohir.A11G267800 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED A11 + View
Glycine max Glyma.17G026400 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 Gm17 + View
Glycine max Glyma.03G213000 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm03 + View
Glycine max Glyma.19G209900 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm19 + View
Glycine max Glyma.07G247500 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 Gm07 - View
Glycine max Glyma.19G233700 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm19 - View
Glycine max Glyma.03G236000 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm03 - View
Glycine max Glyma.20G236400 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm20 + View
Glycine max Glyma.10G152000 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm10 - View
Gossypium raimondii Gorai.007G299900 Chr07 + View
Gossypium raimondii Gorai.004G239600 Chr04 - View
Hydrangea macrophylla Hma1.2p1_1212F.1_g267290 Hma1.2p1_1212F.1 - View
Hydrangea macrophylla Hma1.2p1_1292F.1_g273690 Hma1.2p1_1292F.1 + View
Hydrangea macrophylla Hma1.2p1_0078F.1_g040560 Hma1.2p1_0078F.1 - View
Lupinus albus Lalb_Chr02g0148131 PF05498 - Rapid ALkalinization Factor (RALF) (RALF) Lalb_Chr02 - View
Lupinus albus Lalb_Chr06g0167711 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Lalb_Chr06 + View
Lupinus albus Lalb_Chr18g0047141 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Lalb_Chr18 - View
Lotus japonicus Lj1g0016255 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED chr1 + View
Lotus japonicus Lj5g0010157 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED chr5 - View
Lotus japonicus Lj4g0026721 PTHR33136:SF13 - PROTEIN RALF-LIKE 22 chr4 + View
Lactuca sativa Lsat_1_v5_gn_5_190460 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI19_g29224_MAGBIO AED:0.13 Chr19 - View
Magnolia biondii MBI18_g21828_MAGBIO AED:0.03 Chr18 - View
Malus domestica MD13G1168800 ralf-like 33 Chr13 - View
Malus domestica MD16G1169200 ralf-like 33 Chr16 - View
Malus domestica MD11G1304400 ralf-like 33 Chr11 + View
Malus domestica MD04G1201100 ralf-like 33 Chr04 - View
Malus domestica MD12G1213600 ralf-like 33 Chr12 - View
Manihot esculenta Manes.09G169900 Chromosome09 + View
Manihot esculenta Manes.05G064300 Chromosome05 - View
Manihot esculenta Manes.01G217000 Chromosome01 + View
Manihot esculenta Manes.08G118000 Chromosome08 - View
Manihot esculenta Manes.15G012500 Chromosome15 - View
Manihot esculenta Manes.03G194800 Chromosome03 + View
Medicago truncatula Medtr7g108600 RALF chr7 + View
Medicago truncatula Medtr7g113080 RALF chr7 - View
Medicago truncatula Medtr4g119860 RALF chr4 + View
Nelumbo nucifera Nn3g21435 chr3 + View
Nelumbo nucifera Nn4g25851 chr4 - View
Olea europaea Oeu043356.1 chr3 + View
Olea europaea Oeu010916.1 chr15 + View
Olea europaea Oeu012116.1 chr13 + View
Olea europaea Oeu048347.1 chr1 - View
Oryza sativa ssp. japonica Os01g0257100 Rapid ALkalinization Factor family protein. chr01 - View
Petunia axillaris Peaxi162Scf00037g00921 rapid alkalinization factor 1 Peaxi162Scf00037 - View
Punica granatum PGR004G0623 NC_045131.1 - View
Punica granatum PGR083G2443 NC_045133.1 - View
Punica granatum PGR044G1871 NC_045134.1 + View
Punica granatum PGR031G2049 NC_045127.1 - View
Prunus persica Prupe.1G137000 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Pp01 - View
Prunus persica Prupe.6G321200 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Pp06 - View
Prunus persica Prupe.8G258000 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Pp08 + View
Populus trichocarpa Potri.008G208200 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 Chr08 + View
Populus trichocarpa Potri.005G025800 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Chr05 - View
Populus trichocarpa Potri.013G017400 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Chr13 - View
Phaseolus vulgaris Phvul.006G089900 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr06 - View
Phaseolus vulgaris Phvul.001G205701 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr01 + View
Phaseolus vulgaris Phvul.007G197000 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr07 + View
Phaseolus vulgaris Phvul.003G105300 PTHR33136:SF13 - PROTEIN RALF-LIKE 22 Chr03 - View
Quercus lobata QL03p021840 3 + View
Quercus lobata QL06p008855 6 + View
Quercus lobata QL03p021055 3 - View
Rosa chinensis RcHm_v2.0_Chr3g0455671 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim05G0139100 chr05 - View
Rhododendron simsii Rhsim01G0283800 chr01 + View
Rhododendron simsii Rhsim07G0187600 chr07 + View
Rhododendron simsii Rhsim13G0012600 chr13 - View
Striga asiatica SGA_v2.0_scaffold1G00378 scaffold1 - View
Striga asiatica SGA_v2.0_scaffold2G01406 scaffold2 - View
Salvia bowleyana SalBow7G1520 GWHASIU00000005 - View
Salix brachista Sabra05G0031300 GWHAAZH00000005 - View
Salix brachista Sabra13G0020400 GWHAAZH00000013 - View
Salix brachista Sabra13G0016400 GWHAAZH00000013 - View
Salix brachista Sabra14G0098000 GWHAAZH00000014 - View
Simmondsia chinensis Sc09g0002960 GWHAASQ00000009 - View
Simmondsia chinensis Sc16g0008620 GWHAASQ00000016 + View
Sechium edule Sed0026350 LG03 + View
Sechium edule Sed0002437 LG09 + View
Sechium edule Sed0014038 LG11 - View
Sechium edule Sed0020473 LG04 - View
Sapria himalayana SHI18107 scaffold26_7557582 - View
Solanum lycopersicum Solyc09g074890.1 Rapid ALkalinization Factor (AHRD V3.3 *** A0A200QWN9_9MAGN) SL4.0ch09 + View
Schrenkiella parvula Sp3g04320 PTHR33136:SF13 - PROTEIN RALF-LIKE 22 ch3-1 + View
Schrenkiella parvula Sp2g20870 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 ch2-4 + View
Schrenkiella parvula Sp7g14170 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED ch7-4 + View
Solanum pennellii Sopen09g029710 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. | ralf-like 33 (RALFL33) | CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor | BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400024749 Rapid alkalinization factor 2 ST4.03ch01 - View
Trochodendron aralioides TAR633G1015 group2 + View
Trochodendron aralioides TAR362G0455 group17 - View
Trochodendron aralioides TAR365G0715 group16 - View
Trochodendron aralioides TAR636G0737 group1 - View
Theobroma cacao Thecc.05G312600 Rapid alkalinization factor 1 Chromosome_5 + View
Theobroma cacao Thecc.04G284500 Rapid alkalinization factor 1 Chromosome_4 + View
Theobroma cacao Thecc.01G297000 Ralf-like 33 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104821723 protein RALF-like 22 NW_010966542.1 + View
Tarenaya hassleriana THA.LOC104801268 protein RALF-like 1 NW_010969548.1 + View
Tarenaya hassleriana THA.LOC104818714 protein RALF-like 22 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104802797 protein RALF-like 22 NW_010970490.1 - View
Trifolium pratense TPR.G9615 Tp57577_TGAC_v2_LG6 - View
Trifolium pratense TPR.G33206 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI56G0658 NC_052242.1 - View
Tripterygium wilfordii TWI14G0362 NC_052249.1 - View
Tripterygium wilfordii TWI09G0853 NC_052245.1 + View
Tripterygium wilfordii TWI12G0335 NC_052243.1 + View
Vaccinium macrocarpon vmacro02469 Similar to RALFL33: Protein RALF-like 33 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0131 CM024071.1 - View
Vigna mungo VMungo1383G1911 CM024070.1 + View
Vigna mungo VMungo0540G0997 CM024075.1 + View
Vitis vinifera GSVIVG01031147001 chr14 - View
Vitis vinifera GSVIVG01027973001 chr7 + View
Zea mays Zm00001eb016580 Zm00001e001635 Rapid ALkalinization Factor family protein 1 - View