Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0003338 PREDICTED: MADS-box transcription factor 23-like [Vitis vinifera] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G14880 LG-6 - View
Acer truncatum Atru.chr13.954 chr13 - View
Acer truncatum Atru.chr3.1180 chr3 - View
Actinidia chinensis Actinidia15930 Lachesis_group11 + View
Amaranthus hybridus Ah.10g038170 Agamous-like MADS-box protein AGL8 homolog (POTM1-1) AmaHy_arrow1_Scaffold_10 + View
Amaranthus hybridus Ah.03g134330 AmaHy_arrow1_Scaffold_3 + View
Aquilegia oxysepala Aqoxy6G00651 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JI0U8K PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7GTW3C PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JS19XH arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B128UN PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1 arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT2G22540 K-box region and MADS-box transcription factor family protein Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. SHORT VEGETATIVE PHASE (SVP)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1)%3B Has 7469 Blast hits to 7448 proteins in 905 species: Archae - 3%3B Bacteria - 14%3B Metazoa - 824%3B Fungi - 324%3B Plants - 6168%3B Viruses - 0%3B Other Eukaryotes - 136 (source: NCBI BLink). Chr2 + View
Brassica napus A01p01110 A01 + View
Brassica napus C01p01250 C01 + View
Brassica oleracea BolC1t00122H C1 + View
Brassica rapa BraA08t34258Z A08 - View
Beta vulgaris EL10Ac2g04444 PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Chr2_EL10_PGA_scaffold6 + View
Beta vulgaris EL10Ac6g13312 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G1061.37 PGAv.1.6.scaffold1061 - View
Cannabis sativa CANSAT01G1636 NC_044373.1 + View
Corylus avellana Haze_03924 Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_22494 Similar to AGL16: Agamous-like MADS-box protein AGL16 (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc07_g07970 MADS-box transcription factor 27 chr7 - View
Citrus clementina Ciclev10003094m.g scaffold_5 - View
Citrus clementina Ciclev10027571m.g scaffold_7 - View
Carpinus fangiana Cfa013821 Cfa05 + View
Cardamine hirsuta CARHR246360 AGAMOUS-like MADS-box transcription factor Chr7 - View
Carya illinoinensis CiPaw.07G162300 PTHR11945//PTHR11945:SF147 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Chr07 - View
Carya illinoinensis CiPaw.08G144400 PTHR11945//PTHR11945:SF184 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr08 + View
Citrullus lanatus ClCG01G018230 MADS-box transcription factor 25 CG_Chr01 - View
Cucumis melo MELO3C007700.2 MADS-box transcription factor chr08 - View
Corchorus olitorius COL.COLO4_11687 Transcription factor%2C K-box AWUE01014732.1 - View
Chenopodium quinoa AUR62023162 Agamous-like MADS-box protein AGL8 homolog C_Quinoa_Scaffold_1189 - View
Capsella rubella Carub.0004s0171 PTHR11945:SF179 - MADS-BOX PROTEIN SVP scaffold_4 + View
Cucumis sativus L. CsaV3_6G044810 MADS-box transcription factor chr6 - View
Daucus carota DCAR_010757 hypothetical protein DCARv2_Chr3 + View
Erigeron canadensis ECA246G4338 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.H02430 Chr08 + View
Erythranthe guttata Migut.N02838 scaffold_14 - View
Erythranthe guttata Migut.H00286 scaffold_8 + View
Erythranthe guttata Migut.B00527 scaffold_2 - View
Fragaria x ananassa FAN28G0449 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Fvb1-1 + View
Gossypium hirsutum Gohir.A11G050000 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED A11 - View
Gossypium hirsutum Gohir.D06G029700 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED D06 - View
Gossypium hirsutum Gohir.A06G030400 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED A06 - View
Gossypium hirsutum Gohir.D05G220400 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED D05 - View
Glycine max Glyma.01G020500 PTHR11945//PTHR11945:SF228 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.02G216600 PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Gm02 + View
Glycine max Glyma.13G255200 PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1 Gm13 - View
Gossypium raimondii Gorai.009G227400 Chr09 - View
Gossypium raimondii Gorai.007G058200 Chr07 - View
Helianthus annuus HanXRQChr09g0262151 Putative transcription factor, MADS-box; Transcription factor, K-box HanXRQChr09 - View
Lupinus albus Lalb_Chr05g0216321 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0381531 PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0325831 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Lalb_Chr09 - View
Lotus japonicus LjContig00408g0018582 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Contig00408 - View
Lotus japonicus Lj2g0020722 PTHR11945//PTHR11945:SF228 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED chr2 - View
Lonicera japonica Lj2C430G5 GWHAAZE00000002 - View
Lonicera japonica Lj4A177T25 GWHAAZE00000004 - View
Magnolia biondii MBI16_g07267_MAGBIO AED:0.53 Chr16 - View
Malus domestica MD02G1197400 AGAMOUS-like 20 Chr02 + View
Malus domestica MD15G1307400 AGAMOUS-like 21 Chr15 - View
Malus domestica MD01G1043900 AGAMOUS-like 21 Chr01 + View
Manihot esculenta Manes.13G103666 Chromosome13 - View
Manihot esculenta Manes.12G122000 Chromosome12 - View
Manihot esculenta Manes.05G187800 Chromosome05 - View
Medicago truncatula Medtr5g031000 MADS-box transcription factor chr5 - View
Nicotiana tabacum Nitab4.5_0000036g0460 Transcription factor, MADS-box, Transcription factor, K-box Nitab4.5_0000036 - View
Petunia axillaris Peaxi162Scf00703g00011 MADS-box transcription factor 27 Peaxi162Scf00703 + View
Punica granatum PGR031G0386 NC_045127.1 - View
Prunus persica Prupe.6G208900 PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Pp06 + View
Pisum sativum Psat2g133760 MADS domain signature chr2LG1 + View
Populus trichocarpa Potri.009G079000 PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED Chr09 + View
Phaseolus vulgaris Phvul.002G143866 Chr02 - View
Quercus lobata QL06p037232 6 + View
Quercus lobata QL12p039814 12 + View
Rhododendron simsii Rhsim10G0080200 chr10 - View
Rhododendron simsii Rhsim06G0069700 chr06 - View
Rhododendron simsii Rhsim08G0088000 chr08 + View
Rhododendron simsii Rhsim05G0098500 chr05 - View
Striga asiatica SGA_v2.0_scaffold149G36511 scaffold149 + View
Salvia bowleyana SalBow6G6238 GWHASIU00000002 - View
Salix brachista Sabra02G0086300 GWHAAZH00000002 - View
Simmondsia chinensis Sc16g0000710 GWHAASQ00000016 + View
Simmondsia chinensis Sc11g0008790 GWHAASQ00000011 + View
Sechium edule Sed0004053 LG10 - View
Sechium edule Sed0017033 LG14 + View
Solanum lycopersicum Solyc02g091550.2 MADS box transcription factor AGAMOUS (AHRD V3.3 *** A0A1Q1NK16_PAELC) SL4.0ch02 + View
Schrenkiella parvula Sp7g35590 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED ch7-6 - View
Solanum pennellii Sopen02g036170 MADS-box transcription factor 27 (OsMADS27) (RMADS218) - Oryza sativa (Rice), encodes a MADS box protein, highly expressed in the root. | AGAMOUS-like 21 (AGL21) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400009349 Mads box protein ST4.03ch04 + View
Selenicereus undatus Hund13677 Scaffold_33679 - View
Selenicereus undatus Hund16616 Scaffold_33677 - View
Trochodendron aralioides TAR628G0334 group5 + View
Theobroma cacao Thecc.01G084900 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807663 agamous-like MADS-box protein AGL21 NW_010963495.1 - View
Trifolium pratense TPR.G37109 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI56G0284 NC_052242.1 - View
Vaccinium macrocarpon vmacro18040 Similar to MADS27: MADS-box transcription factor 27 (Oryza sativa subsp. japonica OX%3D39947) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro05524 Similar to MADS27: MADS-box transcription factor 27 (Oryza sativa subsp. japonica OX%3D39947) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G1511 CM024073.1 - View
Vigna mungo VMungo1215G1073 CM024074.1 - View
Vitis vinifera GSVIVG01003858001 chrUn - View
Vitis vinifera GSVIVG01009219001 chr18 + View