Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G5220 LG-8 + View
Acer truncatum Atru.chr9.854 chr9 + View
Actinidia chinensis Actinidia36334 Lachesis_group4 + View
Arabidopsis lyrata AL3G31680 scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y3VQFV arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TSKN2R PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NV4YN2 PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT3G18390 CRS1 / YhbY (CRM) domain-containing protein embryo defective 1865 (EMB1865)%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA-binding%2C CRM domain (InterPro:IPR001890)%3B BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1)%3B Has 1281 Blast hits to 1142 proteins in 135 species: Archae - 11%3B Bacteria - 10%3B Metazoa - 285%3B Fungi - 118%3B Plants - 447%3B Viruses - 43%3B Other Eukaryotes - 367 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC09g48796 ChrC09 + View
Brassica napus C03p49420 C03 + View
Brassica napus C01p45820 C01 - View
Brassica napus C05p47370 C05 - View
Brassica napus A01p35960 A01 - View
Brassica napus A03p40620 A03 + View
Brassica oleracea BolC1t04545H C1 - View
Brassica oleracea BolC3t17239H C3 + View
Brassica rapa BraA01t03677Z A01 - View
Brassica rapa BraA03t13220Z A03 + View
Brassica rapa BraA05t21966Z A05 - View
Beta vulgaris EL10Ac5g11450 PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G625.36 PGAv.1.6.scaffold625 + View
Cannabis sativa CANSAT78G1170 NC_044376.1 + View
Cicer arietinum L. Ca_25489_v3 Ca_LG8_v3 + View
Corylus avellana Haze_18684 Similar to CFM3: CRM-domain containing factor CFM3, chloroplastic/mitochondrial (Zea mays OX%3D4577) 7 - View
Coffea canephora Cc04_g07070 Putative Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chr4 + View
Citrus clementina Ciclev10018859m.g scaffold_3 - View
Ceratophyllum demersum CDE12G0894 10 - View
Ceratophyllum demersum CDE06G0693 4 + View
Carpinus fangiana Cfa019763 Cfa08 + View
Cardamine hirsuta CARHR093740 CRS1 / YhbY (CRM) domain-containing protein Chr3 + View
Carya illinoinensis CiPaw.15G131100 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Chr15 - View
Citrullus lanatus ClCG06G014780 Chloroplastic group IIA intron splicing facilitator CRS1 CG_Chr06 + View
Cucumis melo MELO3C017309.2 Chloroplastic group IIA intron splicing facilitator CRS1 chr02 + View
Carica papaya Cpa.g.sc3.507 supercontig_3 + View
Chenopodium quinoa AUR62029867 Os01g0323300: CRS2-associated factor 2, chloroplastic C_Quinoa_Scaffold_3500 + View
Capsella rubella Carub.0003s1817 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN scaffold_3 + View
Cucumis sativus L. CsaV3_1G003860 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chr1 - View
Davidia involucrata Dinv15681 GWHABJS00000006 + View
Davidia involucrata Dinv28108 GWHABJS00000019 + View
Durio zibethinus Duzib205G1801 NW_019168381.1 + View
Eucalyptus grandis Eucgr.B00725 Chr02 - View
Eutrema salsugineum Thhalv10020034m.g PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN scaffold_13 - View
Fragaria x ananassa FAN08G2048 PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Fvb5-3 - View
Fragaria x ananassa FAN18G3870 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Fvb5-1 + View
Fragaria x ananassa FAN18G4226 PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Fvb5-1 + View
Fragaria x ananassa FAN13G2663 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Fvb5-2 + View
Fragaria x ananassa FAN04G1637 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Fvb5-4 + View
Fragaria vesca FvH4_5g12070 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Fvb5 + View
Gossypium hirsutum Gohir.A12G266500 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN A12 - View
Gossypium hirsutum Gohir.D12G266900 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN D12 - View
Glycine max Glyma.07G092300 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Gm07 - View
Glycine max Glyma.08G041700 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Gm08 - View
Glycine max Glyma.09G183900 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Gm09 + View
Gossypium raimondii Gorai.008G286900 Chr08 - View
Hydrangea macrophylla Hma1.2p1_0653F.1_g196260 Hma1.2p1_0653F.1 + View
Lupinus albus Lalb_Chr24g0397821 PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Lalb_Chr24 - View
Lupinus albus Lalb_Chr05g0222481 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Lalb_Chr05 + View
Lupinus albus Lalb_Chr14g0371131 PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Lalb_Chr14 + View
Lotus japonicus Lj4g0025382 PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN chr4 + View
Lotus japonicus Lj1g0019544 PTHR31846:SF10 - CHLOROPLASTIC GROUP IIA INTRON SPLICING FACILITATOR CRS1, CHLOROPLASTIC chr1 + View
Lotus japonicus Lj2g0016532 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN chr2 - View
Lonicera japonica Lj5A149T44 GWHAAZE00000005 - View
Malus domestica MD06G1216600 CRS1 / YhbY (CRM) domain-containing protein Chr06 - View
Malus domestica MD14G1227100 CRS1 / YhbY (CRM) domain-containing protein Chr14 - View
Manihot esculenta Manes.01G011000 Chromosome01 - View
Medicago truncatula Medtr6g084410 CRS1/YhbY (CRM) domain protein chr6 + View
Nelumbo nucifera Nn4g23859 chr4 - View
Nicotiana tabacum Nitab4.5_0000974g0110 RNA-binding, CRM domain Nitab4.5_0000974 - View
Oryza sativa ssp. japonica Os05g0551900 Similar to EMB1865 (embryo defective 1865); RNA binding. chr05 - View
Petunia axillaris Peaxi162Scf00015g01027 CRM family member 3B Peaxi162Scf00015 - View
Punica granatum PGR083G0883 NC_045133.1 - View
Prunus persica Prupe.5G221800 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Pp05 - View
Prunus persica Prupe.3G145000 PTHR31846:SF10 - CHLOROPLASTIC GROUP IIA INTRON SPLICING FACILITATOR CRS1, CHLOROPLASTIC Pp03 + View
Pisum sativum Psat1g037280 CRS1 / YhbY (CRM) domain chr1LG6 + View
Populus trichocarpa Potri.012G056100 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Chr12 + View
Phaseolus vulgaris Phvul.004G156500 Chr04 + View
Phaseolus vulgaris Phvul.002G316600 PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Chr02 - View
Quercus lobata QL10p025433 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0185501 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim08G0134100 chr08 + View
Salix brachista Sabra12G0039800 GWHAAZH00000012 + View
Simmondsia chinensis Sc12g0007660 GWHAASQ00000012 + View
Sechium edule Sed0002387 LG12 - View
Sechium edule Sed0004365 LG08 - View
Solanum lycopersicum Solyc03g119450.3 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A1J3K5U5_NOCCA) SL4.0ch03 + View
Schrenkiella parvula Sp3g16500 PTHR31846//PTHR31846:SF4 - FAMILY NOT NAMED // CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN ch3-1 + View
Solanum pennellii Sopen03g038300 embryo defective 1865 (EMB1865) | FUNCTIONS IN: RNA binding | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain | BEST Arabidopsis thaliana protein match is: CRM family member 3B Spenn-ch03 + View
Solanum pennellii Sopen02g030880 ortholog of maize chloroplast splicing factor CRS1 (CRS1) | FUNCTIONS IN: RNA binding | INVOLVED IN: Group II intron splicing | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain | BEST Arabidopsis thaliana protein match is: CRS1 / YhbY (CRM) domain-containing protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG401005721 EMB1865 ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG401026400 CRS1 (ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1) ST4.03ch02 + View
Trochodendron aralioides TAR629G3404 group0 - View
Theobroma cacao Thecc.03G035800 CRS1 / YhbY domain-containing protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104820393 CRM-domain containing factor CFM3%2C chloroplastic/mitochondrial NW_010966178.1 + View
Tripterygium wilfordii TWI60G0253 NC_052246.1 + View
Vaccinium macrocarpon vmacro17713 Similar to CFM3: CRM-domain containing factor CFM3, chloroplastic/mitochondrial (Zea mays OX%3D4577) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G0794 CM024069.1 - View
Vigna mungo VMungo0464G0611 CM024077.1 + View
Vitis vinifera GSVIVG01008296001 chr17 + View
Zea mays Zm00001eb294980 Zm00001e032339 CRS1/YhbY (CRM) domain-containing protein 6 - View