Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031299 PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana sylvestris] Chr14 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.1947 chr7 + View
Actinidia chinensis Actinidia40497 Lachesis_group10 - View
Actinidia chinensis Actinidia38724 Lachesis_group8 - View
Avicennia marina MSTRG.10661 ScioBoG_13798_HRSCAF_13862 - View
Aquilegia oxysepala Aqoxy7G03637 CHR07 - View
Aquilegia oxysepala Aqoxy7G02382 CHR07 - View
Beta vulgaris EL10Ac8g18717 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Chr8_EL10_PGA_scaffold4 - View
Cannabis sativa CANSAT56G4315 NC_044371.1 + View
Cannabis sativa CANSAT11G2505 NC_044377.1 - View
Corylus avellana Haze_25511 Similar to HAT: Zinc finger BED domain-containing protein DAYSLEEPER (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc04_g04520 BED zinc finger ;hAT family dimerisation domain chr4 + View
Coffea canephora Cc06_g08090 Putative AC transposase chr6 - View
Citrus clementina Ciclev10025036m.g scaffold_7 + View
Citrus clementina Ciclev10007308m.g scaffold_1 + View
Carya illinoinensis CiPaw.03G248300 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Chr03 + View
Citrullus lanatus ClCG06G011480 HAT-like transposase CG_Chr06 + View
Citrullus lanatus ClCG11G003320 HAT-like transposase CG_Chr11 + View
Cucumis melo MELO3C031570.2 zinc finger BED domain-containing protein DAYSLEEPER chr05 + View
Cucumis melo MELO3C010315.2 zinc finger BED domain-containing protein DAYSLEEPER chr02 - View
Corchorus olitorius COL.COLO4_35151 putative Zinc finger%2C BED-type AWUE01022491.1 + View
Chenopodium quinoa AUR62013311 HAT: Zinc finger BED domain-containing protein DAYSLEEPER C_Quinoa_Scaffold_1611 + View
Chenopodium quinoa AUR62011173 HAT: Zinc finger BED domain-containing protein DAYSLEEPER C_Quinoa_Scaffold_3799 - View
Chenopodium quinoa AUR62016324 HAT: Zinc finger BED domain-containing protein DAYSLEEPER C_Quinoa_Scaffold_3514 - View
Cucumis sativus L. CsaV3_1G026700 zinc finger BED domain-containing protein DAYSLEEPER-like chr1 + View
Cucumis sativus L. CsaV3_2G003180 zinc finger BED domain-containing protein DAYSLEEPER chr2 + View
Davidia involucrata Dinv36481 GWHABJS00000001 - View
Davidia involucrata Dinv30619 GWHABJS00000019 - View
Durio zibethinus Duzib150G1674 NW_019167882.1 + View
Durio zibethinus Duzib187G0112 NW_019167860.1 - View
Erigeron canadensis ECA234G2107 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.C01383 Chr03 + View
Erythranthe guttata Migut.K00427 scaffold_11 - View
Fragaria vesca FvH4_1g02621 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Fvb1 - View
Fragaria vesca FvH4_6g29441 PTHR23272//PTHR23272:SF15 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Fvb6 - View
Gossypium hirsutum Gohir.D06G052933 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED D06 + View
Gossypium hirsutum Gohir.A06G053850 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED A06 + View
Gossypium hirsutum Gohir.A08G088624 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED A08 - View
Gossypium hirsutum Gohir.D08G099550 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED D08 + View
Glycine max Glyma.08G213700 PTHR23272//PTHR23272:SF15 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Gm08 + View
Glycine max Glyma.13G159800 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.17G111500 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Gm17 - View
Glycine max Glyma.07G029100 PTHR23272//PTHR23272:SF15 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Gm07 - View
Gossypium raimondii Gorai.004G107300 Chr04 + View
Helianthus annuus HanXRQChr12g0356071 Putative zinc finger, BED-type; Ribonuclease H-like domain HanXRQChr12 - View
Helianthus annuus HanXRQChr10g0315841 Probable BED zinc finger ;hAT family dimerisation domain HanXRQChr10 + View
Hydrangea macrophylla Hma1.2p1_0343F.1_g130970 Hma1.2p1_0343F.1 - View
Hydrangea macrophylla Hma1.2p1_0497F.1_g166360 Hma1.2p1_0497F.1 + View
Lupinus albus Lalb_Chr25g0279241 PTHR23272//PTHR23272:SF15 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Lalb_Chr25 - View
Lupinus albus Lalb_Chr12g0198221 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Lalb_Chr12 + View
Lotus japonicus Lj4g0011950 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED chr4 - View
Lotus japonicus Lj3g0006638 PTHR23272//PTHR23272:SF15 - BED FINGER-RELATED // SUBFAMILY NOT NAMED chr3 + View
Lonicera japonica Lj7C430T0 GWHAAZE00000007 + View
Malus domestica MD15G1167900 BED zinc finger Chr15 - View
Malus domestica MD17G1214100 BED zinc finger Chr17 + View
Malus domestica MD02G1026500 BED zinc finger Chr02 - View
Manihot esculenta Manes.04G111500 Chromosome04 - View
Medicago truncatula Medtr4g115290 hypothetical protein chr4 + View
Nelumbo nucifera Nn2g12117 chr2 + View
Nelumbo nucifera Nn8g39539 chr8 + View
Olea europaea Oeu055967.1 scaffold707 - View
Punica granatum PGR142G3841 NC_045128.1 - View
Prunus persica Prupe.7G248500 Pp07 + View
Prunus persica Prupe.3G090000 PTHR23272//PTHR23272:SF15 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Pp03 + View
Papaver somniferum PSO017G1312 NC_039362.1 - View
Papaver somniferum PSO170G0654 NC_039360.1 + View
Populus trichocarpa Potri.018G126500 PTHR23272//PTHR23272:SF39 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Chr18 - View
Quercus lobata QL02p089825 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0087641 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim01G0062000 chr01 - View
Rhododendron simsii Rhsim03G0251500 chr03 + View
Salix brachista Sabra18G0107300 GWHAAZH00000018 - View
Salix brachista Sabra06G0048100 GWHAAZH00000006 - View
Simmondsia chinensis Sc14g0000160 GWHAASQ00000014 - View
Sechium edule Sed0018973 LG11 + View
Sechium edule Sed0011183 LG08 - View
Solanum lycopersicum Solyc12g009640.1 zinc finger BED domain-containing protein DAYSLEEPER-like (AHRD V3.3 *** A0A2I4F531_9ROSI) SL4.0ch12 + View
Solanum pennellii Sopen03g035760 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. | BED zinc finger , hAT family dimerisation domain | CONTAINS InterPro DOMAIN/s: HAT dimerisation , Zinc finger, BED-type predicted | BEST Arabidopsis thaliana protein match is: BED zinc finger , hAT family dimerisation domain Spenn-ch03 + View
Solanum pennellii Sopen12g004630 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. | BED zinc finger , hAT family dimerisation domain | CONTAINS InterPro DOMAIN/s: HAT dimerisation , Zinc finger, BED-type predicted | BEST Arabidopsis thaliana protein match is: BED zinc finger , hAT family dimerisation domain Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400002911 HAT-like transposase ST4.03ch12 - View
Selenicereus undatus Hund26539 Scaffold_2055 - View
Trochodendron aralioides TAR625G1298 group4 - View
Theobroma cacao Thecc.06G030400 BED zinc finger Chromosome_6 + View
Theobroma cacao Thecc.09G131800 BED zinc finger Chromosome_9 + View
Trifolium pratense TPR.G26486 Tp57577_TGAC_v2_LG4 + View
Trifolium pratense TPR.G38655 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI34G0701 NC_052235.1 - View
Tripterygium wilfordii TWI32G0223 NC_052254.1 + View
Tripterygium wilfordii TWI12G0050 NC_052243.1 - View
Vitis vinifera GSVIVG01015587001 chr11 + View
Vitis vinifera GSVIVG01017364001 chr9 + View