Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0013162 PREDICTED: protein TRI1-like [Nicotiana sylvestris] Chr13 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G12940 LG-8 + View
Acer truncatum Atru.chr5.2422 chr5 - View
Actinidia chinensis Actinidia27981 Lachesis_group16 - View
Actinidia chinensis Actinidia34382 Lachesis_group2 + View
Arabidopsis lyrata AL3G46700 scaffold_3 - View
Avicennia marina MSTRG.20202 ScioBoG_26180_HRSCAF_26306 + View
Avicennia marina MSTRG.16697 ScioBoG_19743_HRSCAF_19834 - View
Amaranthus hybridus Ah.03g146290 Upstream activation factor subunit spp27 (Upstream activation factor 27 KDa subunit) (p27) (Upstream activation factor 30 KDa subunit) (p30) (Upstream activation factor subunit uaf30) AmaHy_arrow1_Scaffold_3 + View
Arabidopsis thaliana AT2G14880 SWIB/MDM2 domain superfamily protein SWIB/MDM2 domain superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121)%2C SWIB domain (InterPro:IPR019835)%3B BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein (TAIR:AT4G34290.1)%3B Has 1208 Blast hits to 1119 proteins in 254 species: Archae - 0%3B Bacteria - 214%3B Metazoa - 140%3B Fungi - 207%3B Plants - 389%3B Viruses - 11%3B Other Eukaryotes - 247 (source: NCBI BLink). Chr2 - View
Brassica napus C01p04480 C01 - View
Brassica rapa BraA01t00400Z A01 - View
Capsicum annuum CAN.G606.32 PGAv.1.6.scaffold606 + View
Cannabis sativa CANSAT25G0462 NC_044370.1 - View
Cicer arietinum L. Ca_24348_v3 Ca_LG8_v3 + View
Coffea canephora Cc02_g19550 SWIB/MDM2 domain superfamily protein chr2 + View
Citrus clementina Ciclev10029545m.g scaffold_8 - View
Ceratophyllum demersum CDE04G0823 2 + View
Carpinus fangiana Cfa004619 Cfa02 + View
Carya illinoinensis CiPaw.06G167600 PTHR13844//PTHR13844:SF8 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // EXPRESSED PROTEIN Chr06 - View
Carya illinoinensis CiPaw.05G014400 PTHR13844:SF8 - EXPRESSED PROTEIN Chr05 + View
Citrullus lanatus ClCG02G006640 SWIb domain-containing protein CG_Chr02 - View
Cucumis melo MELO3C018505.2 Upstream activation factor subunit spp27 chr01 + View
Corchorus olitorius COL.COLO4_32550 hypothetical protein AWUE01021130.1 - View
Chenopodium quinoa AUR62003961 spp27: Upstream activation factor subunit spp27 C_Quinoa_Scaffold_2370 + View
Chenopodium quinoa AUR62038273 spp27: Upstream activation factor subunit spp27 C_Quinoa_Scaffold_3452 + View
Capsella rubella Carub.0003s2888 PTHR13844:SF8 - EXPRESSED PROTEIN scaffold_3 - View
Cucumis sativus L. CsaV3_7G007990 upstream activation factor subunit spp27-like chr7 - View
Daucus carota DCAR_021969 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_001667 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv42213 GWHABJS00000002 - View
Davidia involucrata Dinv15782 GWHABJS00000005 + View
Durio zibethinus Duzib052G0022 NW_019167849.1 - View
Durio zibethinus Duzib132G0744 NW_019167915.1 + View
Eucalyptus grandis Eucgr.G01289 Chr07 - View
Erythranthe guttata Migut.B00414 scaffold_2 + View
Eutrema salsugineum Thhalv10022904m.g PTHR13844:SF8 - EXPRESSED PROTEIN scaffold_11 - View
Fragaria x ananassa FAN15G0914 PTHR13844:SF8 - EXPRESSED PROTEIN Fvb2-4 + View
Fragaria x ananassa FAN27G0395 PTHR13844:SF8 - EXPRESSED PROTEIN Fvb2-1 + View
Fragaria x ananassa FAN24G1876 PTHR13844//PTHR13844:SF8 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // EXPRESSED PROTEIN Fvb2-2 - View
Fragaria vesca FvH4_2g04600 PTHR13844:SF8 - EXPRESSED PROTEIN Fvb2 + View
Gossypium hirsutum Gohir.D02G206000 PTHR13844:SF8 - EXPRESSED PROTEIN D02 - View
Gossypium hirsutum Gohir.A03G184500 PTHR13844:SF8 - EXPRESSED PROTEIN A03 - View
Gossypium hirsutum Gohir.A12G020600 PTHR13844:SF8 - EXPRESSED PROTEIN A12 - View
Gossypium hirsutum Gohir.D12G020900 PTHR13844:SF8 - EXPRESSED PROTEIN D12 - View
Glycine max Glyma.01G243300 PTHR13844:SF8 - EXPRESSED PROTEIN Gm01 - View
Glycine max Glyma.11G001000 PTHR13844:SF8 - EXPRESSED PROTEIN Gm11 + View
Gossypium raimondii Gorai.008G021200 Chr08 - View
Gossypium raimondii Gorai.005G233400 Chr05 - View
Helianthus annuus HanXRQChr16g0509121 Probable SWIB/MDM2 domain superfamily protein HanXRQChr16 - View
Hydrangea macrophylla Hma1.2p1_1174F.1_g263910 Hma1.2p1_1174F.1 - View
Hydrangea macrophylla Hma1.2p1_1023F.1_g248950 Hma1.2p1_1023F.1 - View
Lotus japonicus Lj1g0012448 PTHR13844:SF8 - EXPRESSED PROTEIN chr1 + View
Lonicera japonica Lj5A217G84 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_7_86080 PTHR13844:SF8 - EXPRESSED PROTEIN Lsat_1_v8_lg_7 - View
Manihot esculenta Manes.10G072600 Chromosome10 - View
Medicago truncatula Medtr5g005200 SWIB/MDM2 domain protein chr5 + View
Nelumbo nucifera Nn5g30486 chr5 + View
Nelumbo nucifera Nn1g04640 chr1 - View
Nicotiana tabacum Nitab4.5_0001480g0030 SWIB domain, SWIB/MDM2 domain Nitab4.5_0001480 - View
Nicotiana tabacum Nitab4.5_0004685g0010 SWIB domain, SWIB/MDM2 domain Nitab4.5_0004685 + View
Olea europaea Oeu010412.1 chr15 + View
Petunia axillaris Peaxi162Scf00016g02621 SWIB/MDM2 domain superfamily protein Peaxi162Scf00016 + View
Punica granatum PGR042G0825 NC_045130.1 - View
Pisum sativum Psat4g228120 SWIB/MDM2 domain chr4LG4 - View
Papaver somniferum PSO541G1858 NC_039363.1 + View
Papaver somniferum PSO675G7513 NC_039358.1 + View
Populus trichocarpa Potri.009G092200 PTHR13844:SF8 - EXPRESSED PROTEIN Chr09 - View
Populus trichocarpa Potri.001G297400 PTHR13844:SF8 - EXPRESSED PROTEIN Chr01 - View
Phaseolus vulgaris Phvul.002G052700 PTHR13844:SF8 - EXPRESSED PROTEIN Chr02 - View
Quercus lobata QL11p032161 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0254211 RcHm_v2.0_Chr6 - View
Salvia bowleyana SalBow6G5645 GWHASIU00000002 + View
Salix brachista Sabra09G0070900 GWHAAZH00000009 - View
Salix brachista Sabra16G0186400 GWHAAZH00000016 - View
Solanum lycopersicum Solyc01g107330.4 SWIB domain-containing protein (AHRD V3.3 *** A0A1Q3C0F4_CEPFO) SL4.0ch01 - View
Solanum pennellii Sopen01g049570 SWIB/MDM2 domain superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain , SWIB domain | BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein Spenn-ch01 - View
Solanum pennellii Sopen10g020980 SWIB/MDM2 domain superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain , SWIB domain | BEST Arabidopsis thaliana protein match is: SWIB/MDM2 domain superfamily protein Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400025852 Brg-1 associated factor ST4.03ch01 - View
Trochodendron aralioides TAR376G0708 group14 - View
Trochodendron aralioides TAR628G1002 group5 - View
Theobroma cacao Thecc.02G112800 SWIB/MDM2 domain superfamily protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104819539 protein TRI1-like NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104807230 upstream activation factor subunit UAF30-like NW_010963495.1 - View
Trifolium pratense TPR.G8307 Tp57577_TGAC_v2_LG2 - View
Utricularia gibba unitig_744.g24220 unitig_744 - View
Vaccinium macrocarpon vmacro19463 Similar to spp27: Upstream activation factor subunit spp27 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3336 CM024074.1 + View
Vitis vinifera GSVIVG01037881001 chr3 + View