Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0039957 RING/U-box superfamily protein isoform 2 [Theobroma cacao] Contig1054 + View
CSS0038949 RING/U-box superfamily protein [Theobroma cacao] Chr7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G6150 LG-11 - View
Aethionema arabicum Aa31LG5G11510 LG-5 - View
Acer truncatum Atru.chr12.176 chr12 + View
Acer truncatum Atru.chr8.2400 chr8 + View
Avicennia marina MSTRG.12709 ScioBoG_17730_HRSCAF_17811 + View
Amaranthus hybridus Ah.08g209440 AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy4G02406 CHR04 + View
Brassica carinata BcaC03g13103 ChrC03 - View
Brassica carinata BcaB05g21904 ChrB05 - View
Brassica rapa BraA02t04673Z A02 - View
Cannabis sativa CANSAT35G0415 NC_044378.1 - View
Cicer arietinum L. Ca_07759_v3 Ca_LG3_v3 + View
Corylus avellana Haze_21171 Similar to ATL72: RING-H2 finger protein ATL72 (Arabidopsis thaliana OX%3D3702) 10 + View
Corylus avellana Haze_17354 Similar to ATL72: RING-H2 finger protein ATL72 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g05400 RING-H2 finger protein ATL72 chr2 - View
Coffea canephora Cc01_g15310 RING-H2 finger protein ATL73 chr1 + View
Citrus clementina Ciclev10032803m.g scaffold_4 + View
Citrus clementina Ciclev10013579m.g scaffold_6 + View
Ceratophyllum demersum CDE04G1355 2 - View
Carpinus fangiana Cfa017037 Cfa07 - View
Carya illinoinensis CiPaw.01G306400 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Chr01 + View
Carya illinoinensis CiPaw.09G220900 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr09 + View
Citrullus lanatus ClCG10G022690 Ring finger protein, putative CG_Chr10 + View
Citrullus lanatus ClCG11G005680 Ring finger protein, putative CG_Chr11 - View
Cucumis melo MELO3C025221.2 RING-H2 finger protein ATL74 chr08 - View
Cucumis melo MELO3C009107.2 RING-H2 finger protein ATL74-like chr04 + View
Cucumis melo MELO3C020006.2 RING-H2 finger protein ATL74-like chr03 - View
Carica papaya Cpa.g.sc19.61 supercontig_19 - View
Cucumis sativus L. CsaV3_3G033140 RING-H2 finger protein ATL74-like chr3 - View
Cucumis sativus L. CsaV3_4G027170 RING-H2 finger protein ATL74 chr4 + View
Cucumis sativus L. CsaV3_6G002290 RING-H2 finger protein chr6 + View
Daucus carota DCAR_028914 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv21844 GWHABJS00000004 - View
Davidia involucrata Dinv12279 GWHABJS00000007 + View
Davidia involucrata Dinv25338 GWHABJS00000012 + View
Davidia involucrata Dinv11359 GWHABJS00000015 + View
Durio zibethinus Duzib151G0647 NW_019167904.1 - View
Durio zibethinus Duzib268G1668 NW_019168270.1 - View
Durio zibethinus Duzib212G0890 NW_019168026.1 - View
Durio zibethinus Duzib128G1611 NW_019168481.1 - View
Erigeron canadensis ECA232G3641 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA236G3767 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.J00118 Chr10 - View
Erythranthe guttata Migut.N00731 scaffold_14 - View
Fragaria x ananassa FAN03G0506 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-3 + View
Fragaria x ananassa FAN09G2450 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb6-2 + View
Fragaria x ananassa FAN06G0299 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Fvb7-2 + View
Fragaria x ananassa FAN14G0832 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Fvb6-1 + View
Fragaria x ananassa FAN02G1111 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Fvb6-4 - View
Fragaria x ananassa FAN01G0201 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-4 - View
Fragaria x ananassa FAN05G4890 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria x ananassa FAN10G1034 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria x ananassa FAN05G5793 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb6-3 + View
Fragaria vesca FvH4_6g09940 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Fvb6 - View
Fragaria vesca FvH4_7g25880 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7 + View
Gossypium hirsutum Gohir.A02G003650 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED A02 - View
Gossypium hirsutum Gohir.A10G150400 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED A10 + View
Gossypium hirsutum Gohir.D02G004050 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED D02 - View
Gossypium hirsutum Gohir.D10G115900 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED D10 - View
Gossypium hirsutum Gohir.A10G179700 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) A10 + View
Gossypium hirsutum Gohir.D10G186400 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) D10 + View
Gossypium hirsutum Gohir.D06G186300 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D06 - View
Glycine max Glyma.06G143100 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Gm06 - View
Glycine max Glyma.04G222300 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Gm04 + View
Glycine max Glyma.09G275300 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Gm09 - View
Glycine max Glyma.18G214200 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Gm18 - View
Gossypium raimondii Gorai.010G218600 Chr10 - View
Gossypium raimondii Gorai.011G127700 Chr11 - View
Gossypium raimondii Gorai.005G004600 Chr05 - View
Lupinus albus Lalb_Chr19g0124011 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Lalb_Chr19 - View
Lupinus albus Lalb_Chr08g0239151 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Lalb_Chr08 + View
Lotus japonicus Lj1g0024615 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) chr1 - View
Lotus japonicus Lj1g0026066 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED chr1 + View
Lonicera japonica Lj2P1101T15 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_5_152401 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI15_g08961_MAGBIO AED:0.01 Chr15 + View
Malus domestica MD04G1174300 RING/U-box superfamily protein Chr04 + View
Malus domestica MD12G1187900 RING/U-box superfamily protein Chr12 + View
Malus domestica MD07G1233300 RING/U-box superfamily protein Chr07 + View
Malus domestica MD01G1167200 RING/U-box superfamily protein Chr01 + View
Manihot esculenta Manes.08G171500 Chromosome08 - View
Manihot esculenta Manes.10G001200 Chromosome10 - View
Manihot esculenta Manes.07G140800 Chromosome07 + View
Manihot esculenta Manes.09G117400 Chromosome09 + View
Medicago truncatula Medtr7g073200 RING-H2 finger protein ATL1L chr7 + View
Nelumbo nucifera Nn2g10313 chr2 - View
Nelumbo nucifera Nn5g26854 chr5 - View
Olea europaea Oeu057984.1 chr13 - View
Oryza sativa ssp. japonica Os11g0116200 Similar to nonspecific lipid-transfer protein 3. Similar to Zinc finger, C3HC4 type family protein, expressed. chr11 + View
Oryza sativa ssp. japonica Os05g0478000 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr05 + View
Oryza sativa ssp. japonica Os01g0822800 Similar to RING-H2 finger protein ATL3C. chr01 - View
Petunia axillaris Peaxi162Scf00732g00337 Unknown protein Peaxi162Scf00732 - View
Punica granatum PGR044G0975 NC_045134.1 + View
Punica granatum PGR004G1383 NC_045131.1 + View
Prunus persica Prupe.6G293100 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Pp06 + View
Prunus persica Prupe.2G263800 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Pp02 + View
Papaver somniferum PSO339G0639 NC_039366.1 + View
Papaver somniferum PSO384G1196 NC_039368.1 - View
Papaver somniferum PSO017G4723 NC_039362.1 - View
Populus trichocarpa Potri.016G136200 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Chr16 + View
Populus trichocarpa Potri.019G057700 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Chr19 + View
Populus trichocarpa Potri.019G130100 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Chr19 + View
Phaseolus vulgaris Phvul.008G083200 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Chr08 - View
Quercus lobata QL07p032181 7 - View
Quercus lobata QL08p064794 8 + View
Rosa chinensis RcHm_v2.0_Chr3g0460531 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim01G0243000 chr01 + View
Rhododendron simsii Rhsim13G0059800 chr13 - View
Rhododendron simsii Rhsim09G0185700 chr09 + View
Striga asiatica SGA_v2.0_scaffold120G32986 scaffold120 - View
Striga asiatica SGA_v2.0_scaffold60G20890 scaffold60 - View
Salix brachista Sabra19G0073400 GWHAAZH00000019 + View
Simmondsia chinensis Sc02g0000200 GWHAASQ00000002 - View
Sechium edule Sed0007992 LG04 - View
Solanum lycopersicum Solyc06g049030.4 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QK74_ARTAN) SL4.0ch06 - View
Solanum pennellii Sopen06g015390 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch06 - View
Trochodendron aralioides TAR369G0072 group18 - View
Trochodendron aralioides TAR636G3195 group1 - View
Trochodendron aralioides TAR633G0720 group2 + View
Theobroma cacao Thecc.04G152400 RING/U-box superfamily protein Chromosome_4 - View
Trifolium pratense TPR.G14119 Tp57577_TGAC_v2_scaf_440 - View
Tripterygium wilfordii TWI77G0379 NC_052236.1 + View
Tripterygium wilfordii TWI53G0668 NC_052244.1 + View
Tripterygium wilfordii TWI09G1458 NC_052245.1 - View
Vaccinium macrocarpon vmacro09961 Similar to ATL72: RING-H2 finger protein ATL72 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G1175 CM024070.1 - View
Vitis vinifera GSVIVG01032684001 chr13 - View
Zea mays Zm00001eb290630 Zm00001e031922 RING-H2 finger protein ATL5A Putative RING zinc finger domain superfamily protein%3B RING-H2 finger protein ATL5A 6 + View