Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0009346 PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Vitis vinifera] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.2150 chr11 - View
Actinidia chinensis Actinidia37437 Lachesis_group16 - View
Arabidopsis lyrata AL1G40350 scaffold_1 - View
Arabidopsis lyrata AL2G26610 scaffold_2 + View
Avicennia marina MSTRG.7944 ScioBoG_102841_HRSCAF_103114 - View
Arabidopsis thaliana AT1G67856 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G24580.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G24580 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G67856.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 + View
Cannabis sativa CANSAT01G3068 NC_044373.1 - View
Citrus clementina Ciclev10032987m.g scaffold_4 + View
Carpinus fangiana Cfa009223 Cfa03 - View
Cardamine hirsuta CARHR060500 RING-H2 finger protein Chr2 + View
Cardamine hirsuta CARHR026510 RING/U-box superfamily protein Chr1 - View
Carya illinoinensis CiPaw.05G181100 K16285 - RING/U-box domain-containing protein (XERICO) Chr05 + View
Carya illinoinensis CiPaw.06G067000 PF13639 - Ring finger domain (zf-RING_2) Chr06 + View
Citrullus lanatus ClCG05G025820 RING/U-box superfamily protein LENGTH=133 CG_Chr05 - View
Cucumis melo MELO3C011942.2 E3 ubiquitin-protein ligase chr10 - View
Carica papaya Cpa.g.sc33.34 supercontig_33 - View
Capsella rubella Carub.0002s1433 K16285 - RING/U-box domain-containing protein (XERICO) scaffold_2 + View
Capsella rubella Carub.0001s2553 K16285 - RING/U-box domain-containing protein (XERICO) scaffold_1 - View
Daucus carota DCAR_026508 hypothetical protein DCARv2_Chr8 - View
Durio zibethinus Duzib251G0186 NW_019167971.1 - View
Eucalyptus grandis Eucgr.B03280 Chr02 - View
Eutrema salsugineum Thhalv10009051m.g PTHR14155:SF110 - RING/U-BOX DOMAIN-CONTAINING PROTEIN scaffold_5 + View
Fragaria x ananassa FAN17G2998 K16285 - RING/U-box domain-containing protein (XERICO) Fvb4-2 + View
Fragaria x ananassa FAN22G1948 K16285 - RING/U-box domain-containing protein (XERICO) Fvb4-1 - View
Fragaria x ananassa FAN07G2103 K16285 - RING/U-box domain-containing protein (XERICO) Fvb4-4 + View
Fragaria x ananassa FAN12G0072 PTHR14155:SF110 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb4-3 + View
Fragaria vesca FvH4_4g25700 K16285 - RING/U-box domain-containing protein (XERICO) Fvb4 - View
Gossypium hirsutum Gohir.A01G158800 K16285 - RING/U-box domain-containing protein (XERICO) A01 + View
Gossypium hirsutum Gohir.D01G151600 K16285 - RING/U-box domain-containing protein (XERICO) D01 - View
Hydrangea macrophylla Hma1.2p1_0079F.1_g041030 Hma1.2p1_0079F.1 - View
Lupinus albus Lalb_Chr11g0075491 K16285 - RING/U-box domain-containing protein (XERICO) Lalb_Chr11 - View
Malus domestica MD16G1100900 RING/U-box superfamily protein Chr16 + View
Manihot esculenta Manes.13G023100 Chromosome13 + View
Manihot esculenta Manes.12G022000 Chromosome12 + View
Nelumbo nucifera Nn3g16690 chr3 + View
Prunus persica Prupe.1G246100 K16285 - RING/U-box domain-containing protein (XERICO) Pp01 - View
Populus trichocarpa Potri.008G185800 K16285 - RING/U-box domain-containing protein (XERICO) Chr08 + View
Populus trichocarpa Potri.010G047100 K16285 - RING/U-box domain-containing protein (XERICO) Chr10 - View
Quercus lobata QL03p057679 3 + View
Rosa chinensis RcHm_v2.0_Chr4g0433131 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0109400 chr12 - View
Simmondsia chinensis Sc14g0008770 GWHAASQ00000014 - View
Simmondsia chinensis Sc04g0009570 GWHAASQ00000004 - View
Sechium edule Sed0002660 LG04 + View
Sechium edule Sed0005832 LG06 - View
Schrenkiella parvula Sp1g23210 K16285 - RING/U-box domain-containing protein (XERICO) ch1-1 - View
Trochodendron aralioides TAR371G1144 group13 - View
Theobroma cacao Thecc.02G261700 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104825557 probable E3 ubiquitin-protein ligase XERICO NW_010967396.1 + View
Tripterygium wilfordii TWI36G0417 NC_052237.1 + View
Vaccinium macrocarpon vmacro16190 Similar to XERICO: Probable E3 ubiquitin-protein ligase XERICO (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01000538001 chr1 + View