Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G9550 LG-8 + View
Acer truncatum Atru.chr4.2234 chr4 - View
Actinidia chinensis Actinidia40089 Lachesis_group22 - View
Arabidopsis lyrata AL7G41620 scaffold_7 + View
Avicennia marina MSTRG.9926 ScioBoG_12795_HRSCAF_12848 - View
Arabidopsis thaliana AT3G23070 CRM family member 3A Encodes a CRM domain protein CFM3a%2C involved in group IIB intron splicing in chloroplasts. CRM family member 3A (CFM3A)%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: seed development%2C Group II intron splicing%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA-binding%2C CRM domain (InterPro:IPR001890)%3B BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1)%3B Has 676 Blast hits to 606 proteins in 108 species: Archae - 3%3B Bacteria - 41%3B Metazoa - 114%3B Fungi - 55%3B Plants - 403%3B Viruses - 3%3B Other Eukaryotes - 57 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT4G14510 CRM family member 3B Encodes a CRM domain protein CFM3b. Homolog of CFM3a (AT3G23070). CFM3a is shown to function in the splicing of group IIB introns in chloroplasts. CRM family member 3B (CFM3B)%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: seed development%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA-binding%2C CRM domain (InterPro:IPR001890)%3B BEST Arabidopsis thaliana protein match is: CRM family member 3A (TAIR:AT3G23070.1)%3B Has 927 Blast hits to 829 proteins in 130 species: Archae - 3%3B Bacteria - 35%3B Metazoa - 203%3B Fungi - 82%3B Plants - 394%3B Viruses - 11%3B Other Eukaryotes - 199 (source: NCBI BLink). Chr4 - View
Capsicum annuum CAN.G1007.16 PGAv.1.6.scaffold1007 - View
Cannabis sativa CANSAT78G1000 NC_044376.1 - View
Cicer arietinum L. Ca_09834_v3 Ca_LG4_v3 + View
Corylus avellana Haze_11296 Similar to CFM3A: CRM-domain containing factor CFM3A, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc03_g04810 Putative Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chr3 + View
Citrus clementina Ciclev10004262m.g scaffold_9 + View
Carpinus fangiana Cfa008381 Cfa03 - View
Cardamine hirsuta CARHR220730 Chloroplastic group IIA intron splicing facilitator CRS1 Chr7 - View
Cardamine hirsuta CARHR098980 Chloroplastic group IIA intron splicing facilitator CRS1 Chr3 + View
Carya illinoinensis CiPaw.02G116700 PTHR31846//PTHR31846:SF13 - FAMILY NOT NAMED // CRM FAMILY MEMBER 3A-RELATED Chr02 - View
Citrullus lanatus ClCG05G004630 Chloroplastic group IIA intron splicing facilitator CRS1 CG_Chr05 - View
Cucumis melo MELO3C006472.2 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chr06 - View
Corchorus olitorius COL.COLO4_15785 hypothetical protein AWUE01015821.1 + View
Carica papaya Cpa.g.sc58.44 supercontig_58 + View
Chenopodium quinoa AUR62025849 At5g16180: Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic C_Quinoa_Scaffold_1534 - View
Capsella rubella Carub.0003s2324 PTHR31846//PTHR31846:SF13 - FAMILY NOT NAMED // CRM FAMILY MEMBER 3A-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_3G012610 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic chr3 - View
Daucus carota DCAR_027273 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv29915 GWHABJS00000016 - View
Erigeron canadensis ECA240G2568 Conyza_canadensis_scaffold:5 - View
Erythranthe guttata Migut.G00432 scaffold_7 + View
Eutrema salsugineum Thhalv10020286m.g PTHR31846:SF13 - CRM FAMILY MEMBER 3A-RELATED scaffold_13 - View
Glycine max Glyma.20G205000 PTHR31846//PTHR31846:SF13 - FAMILY NOT NAMED // CRM FAMILY MEMBER 3A-RELATED Gm20 + View
Glycine max Glyma.10G185400 PTHR31846//PTHR31846:SF13 - FAMILY NOT NAMED // CRM FAMILY MEMBER 3A-RELATED Gm10 - View
Gossypium raimondii Gorai.011G170900 Chr11 + View
Lotus japonicus Lj5g0018581 PTHR31846:SF13 - CRM FAMILY MEMBER 3A-RELATED chr5 - View
Lonicera japonica Lj6A656T66 GWHAAZE00000006 + View
Malus domestica MD16G1208000 CRM family member 3A Chr16 + View
Malus domestica MD13G1206700 CRM family member 3A Chr13 + View
Manihot esculenta Manes.03G169200 Chromosome03 - View
Medicago truncatula Medtr1g075190 CRS1/YhbY (CRM) domain protein chr1 + View
Nelumbo nucifera Nn1g02592 chr1 + View
Nicotiana tabacum Nitab4.5_0000525g0170 RNA-binding, CRM domain Nitab4.5_0000525 + View
Petunia axillaris Peaxi162Scf00813g00124 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic Peaxi162Scf00813 + View
Punica granatum PGR031G0096 NC_045127.1 + View
Prunus persica Prupe.1G030300 PTHR31846:SF13 - CRM FAMILY MEMBER 3A-RELATED Pp01 + View
Papaver somniferum PSO210G3130 NC_039359.1 - View
Populus trichocarpa Potri.010G077100 PTHR31846//PTHR31846:SF13 - FAMILY NOT NAMED // CRM FAMILY MEMBER 3A-RELATED Chr10 - View
Rhododendron simsii Rhsim04G0190700 chr04 - View
Striga asiatica SGA_v2.0_scaffold88G27292 scaffold88 - View
Salvia bowleyana SalBow2G1802 GWHASIU00000007 - View
Salix brachista Sabra10G0031700 GWHAAZH00000010 + View
Sechium edule Sed0024219 LG02 + View
Solanum lycopersicum Solyc09g083350.3 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A1J3FEK9_NOCCA) SL4.0ch09 + View
Schrenkiella parvula Sp3g20750 PTHR31846//PTHR31846:SF13 - FAMILY NOT NAMED // CRM FAMILY MEMBER 3A-RELATED ch3-1 + View
Solanum pennellii Sopen09g032270 Encodes a CRM domain protein CFM3a, involved in group IIB intron splicing in chloroplasts. | CRM family member 3A (CFM3A) | FUNCTIONS IN: RNA binding | INVOLVED IN: seed development, Group II intron splicing | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain | BEST Arabidopsis thaliana protein match is: CRM family member 3B Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400001131 RNA binding ST4.03ch09 + View
Theobroma cacao Thecc.04G245700 CRM family member 3A Chromosome_4 + View
Tarenaya hassleriana THA.LOC104808594 CRM-domain containing factor CFM3A%2C chloroplastic/mitochondrial-like NW_010964923.1 + View
Tripterygium wilfordii TWI73G0586 NC_052232.1 + View
Vaccinium macrocarpon vmacro08409 Similar to CFM3A: CRM-domain containing factor CFM3A, chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G2345 CM024071.1 - View
Vitis vinifera GSVIVG01018109001 chr5 + View