Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0034416 PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Vitis vinifera] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G5670 LG-7 - View
Acer truncatum Atru.chr13.1528 chr13 + View
Actinidia chinensis Actinidia21301 Lachesis_group28 - View
Arabidopsis lyrata AL1G34870 scaffold_1 - View
Aquilegia oxysepala Aqoxy6G00265 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8ZSB7P PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D2JSQE PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT1G21700 SWITCH/sucrose nonfermenting 3C a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A%2C the other two members of the SWI3 family. Homologous to yeast SWI3 %26 RSC8%2C components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003). SWITCH/sucrose nonfermenting 3C (SWI3C)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: chromatin remodeling%3B LOCATED IN: SWI/SNF complex%2C chromatin remodeling complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C SWIRM (InterPro:IPR007526)%2C SANT%2C eukarya (InterPro:IPR017884)%3B BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT4G34430.3)%3B Has 4703 Blast hits to 3623 proteins in 273 species: Archae - 0%3B Bacteria - 43%3B Metazoa - 1892%3B Fungi - 779%3B Plants - 380%3B Viruses - 2%3B Other Eukaryotes - 1607 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g32167 ChrB07 - View
Brassica napus A06p17790 A06 - View
Brassica rapa BraA06t24871Z A06 - View
Cannabis sativa CANSAT25G2087 NC_044370.1 + View
Corylus avellana Haze_17517 Similar to SWI3C: SWI/SNF complex subunit SWI3C (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc10_g12300 SWI/SNF complex subunit SWI3C chr10 + View
Citrus clementina Ciclev10000405m.g scaffold_5 + View
Carpinus fangiana Cfa018563 Cfa07 - View
Cardamine hirsuta CARHR022060 SWI/SNF complex subunit SWI3C Chr1 - View
Carya illinoinensis CiPaw.16G025500 PF00249//PF04433 - Myb-like DNA-binding domain (Myb_DNA-binding) // SWIRM domain (SWIRM) Chr16 - View
Carya illinoinensis CiPaw.15G034000 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr15 - View
Carica papaya Cpa.g.sc64.124 supercontig_64 + View
Capsella rubella Carub.0001s2114 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA scaffold_1 - View
Cucumis sativus L. CsaV3_4G028080 SWI/SNF complex subunit SWI3C chr4 - View
Daucus carota DCAR_003565 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv14648 GWHABJS00000011 + View
Davidia involucrata Dinv27281 GWHABJS00000002 + View
Durio zibethinus Duzib041G0679 NW_019167826.1 + View
Durio zibethinus Duzib116G0856 NW_019167949.1 + View
Durio zibethinus Duzib093G1487 NW_019167937.1 - View
Erigeron canadensis ECA246G4266 Conyza_canadensis_scaffold:8 + View
Eutrema salsugineum Thhalv10006819m.g scaffold_5 + View
Fragaria x ananassa FAN24G0753 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA Fvb2-2 - View
Fragaria vesca FvH4_2g27500 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Fvb2 + View
Gossypium hirsutum Gohir.A02G071900 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA A02 - View
Gossypium hirsutum Gohir.D02G079200 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA D02 - View
Glycine max Glyma.06G115600 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Gm06 + View
Glycine max Glyma.13G031300 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Gm13 + View
Glycine max Glyma.14G153000 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Gm14 + View
Hydrangea macrophylla Hma1.2p1_0542F.1_g174880 Hma1.2p1_0542F.1 + View
Lupinus albus Lalb_Chr08g0241261 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA Lalb_Chr08 - View
Lupinus albus Lalb_Chr11g0066081 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA Lalb_Chr11 + View
Lotus japonicus Lj1g0001950 PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA chr1 - View
Lonicera japonica Lj7C345G4 GWHAAZE00000007 - View
Lonicera japonica Lj4A636G19 GWHAAZE00000004 + View
Manihot esculenta Manes.02G166500 Chromosome02 + View
Manihot esculenta Manes.18G080000 Chromosome18 + View
Medicago truncatula Medtr3g088480 SWI/SNF complex protein chr3 + View
Nelumbo nucifera Nn5g28395 chr5 + View
Olea europaea Oeu001540.1 chr23 - View
Olea europaea Oeu040406.1 chr5 + View
Punica granatum PGR042G2649 NC_045130.1 + View
Pisum sativum Psat5g086040 SWIRM-associated region 1 chr5LG3 - View
Papaver somniferum PSO528G0199 NW_020653081.1 - View
Populus trichocarpa Potri.005G180800 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr05 + View
Populus trichocarpa Potri.002G080600 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr02 - View
Phaseolus vulgaris Phvul.001G071900 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Chr01 - View
Quercus lobata QL09p033728 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0296331 RcHm_v2.0_Chr6 + View
Striga asiatica SGA_v2.0_scaffold24G10435 scaffold24 - View
Salix brachista Sabra02G0063100 GWHAAZH00000002 - View
Salix brachista Sabra05G0136800 GWHAAZH00000005 + View
Sechium edule Sed0027165 LG05 + View
Schrenkiella parvula Sp1g19260 PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA ch1-1 - View
Solanum pennellii Sopen06g020240 a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3, RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003). | SWITCH/sucrose nonfermenting 3C (SWI3C) | FUNCTIONS IN: DNA binding | INVOLVED IN: chromatin remodeling | LOCATED IN: SWI/SNF complex, chromatin remodeling complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , SWIRM , SANT, eukarya | BEST Arabidopsis thaliana protein match is: DNA-binding family protein Spenn-ch06 - View
Trochodendron aralioides TAR628G1385 group5 - View
Theobroma cacao Thecc.08G129700 SWITCH/sucrose nonfermenting 3C Chromosome_8 + View
Trifolium pratense TPR.G13468 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI60G0950 NC_052246.1 - View
Tripterygium wilfordii TWI34G1002 NC_052235.1 + View
Vigna mungo VMungo1309G1139 CM024072.1 + View
Vigna mungo VMungo0647G1964 CM024073.1 - View
Vitis vinifera GSVIVG01008831001 chr18 - View