Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008462 PREDICTED: protein trichome birefringence-like 11 [Nelumbo nucifera] Chr11 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G16570 LG-5 - View
Aethionema arabicum Aa31LG11G10470 LG-11 - View
Acer truncatum Atru.chr5.1416 chr5 + View
Actinidia chinensis Actinidia36989 Lachesis_group10 - View
Actinidia chinensis Actinidia08508 Lachesis_group18 - View
Actinidia chinensis Actinidia00744 Lachesis_group19 - View
Arabidopsis lyrata AL6G30590 scaffold_6 + View
Arabidopsis lyrata AL3G16920 scaffold_3 + View
Avicennia marina MSTRG.4002 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.10009 ScioBoG_12795_HRSCAF_12848 - View
Aquilegia oxysepala Aqoxy2G03289 CHR02 + View
Aquilegia oxysepala Aqoxy5G00517 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SAR19R PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IC6NPA 1.1.1.102 - 3-dehydrosphinganine reductase / KTS reductase arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.BT0STD PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT5G19160 TRICHOME BIREFRINGENCE-LIKE 11 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 11 (TBL11)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G06080 trichome birefringence-like protein (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 10 (TBL10)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 11 (TAIR:AT5G19160.1)%3B Has 1282 Blast hits to 1271 proteins in 25 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1282%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 11 (TAIR:AT5G19160.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC04g18591 ChrC04 - View
Brassica carinata BcaB08g36597 ChrB08 - View
Brassica napus C05p61170 C05 + View
Brassica napus A10p20460 A10 - View
Brassica napus A03p34510 A03 - View
Brassica napus A05p41920 A05 + View
Brassica napus C03p41970 C03 - View
Brassica napus C09p57090 C09 - View
Brassica oleracea BolC9t58574H C9 - View
Brassica oleracea BolC9t58638H C9 + View
Brassica oleracea BolC3t16479H C3 - View
Brassica oleracea BolC5t34777H C5 + View
Brassica rapa BraA10t44116Z A10 - View
Brassica rapa BraA05t22914Z A05 + View
Brassica rapa BraA03t12628Z A03 - View
Beta vulgaris EL10Ac3g06377 PTHR32285//PTHR32285:SF55 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 4 Chr3_EL10_PGA_scaffold7 - View
Cannabis sativa CANSAT78G1985 NC_044376.1 + View
Corylus avellana Haze_04726 Similar to TBL11: Protein trichome birefringence-like 11 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc03_g03250 TRICHOME BIREFRINGENCE-LIKE 11 chr3 + View
Citrus clementina Ciclev10004949m.g scaffold_9 + View
Citrus clementina Ciclev10020003m.g scaffold_3 - View
Cardamine hirsuta CARHR080590 TRICHOME BIREFRINGENCE-LIKE 11 Chr3 - View
Cardamine hirsuta CARHR193780 TRICHOME BIREFRINGENCE-LIKE 11 Chr6 - View
Carya illinoinensis CiPaw.07G092600 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Chr07 - View
Carya illinoinensis CiPaw.02G093400 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Chr02 + View
Carya illinoinensis CiPaw.01G161300 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Chr01 + View
Citrullus lanatus ClCG06G005860 TRICHOME BIREFRINGENCE-LIKE 11 LENGTH=464 CG_Chr06 + View
Cucumis melo MELO3C021408.2 Protein trichome birefringence-like 10 chr11 - View
Corchorus olitorius COL.COLO4_26628 hypothetical protein AWUE01019335.1 + View
Chenopodium quinoa AUR62038064 TBL10: Protein trichome birefringence-like 10 C_Quinoa_Scaffold_1613 + View
Chenopodium quinoa AUR62036817 TBL11: Protein trichome birefringence-like 11 C_Quinoa_Scaffold_3080 + View
Capsella rubella Carub.0003s0552 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED scaffold_3 - View
Capsella rubella Carub.0006s1750 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED scaffold_6 + View
Daucus carota DCAR_002403 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv32945 GWHABJS00000010 - View
Davidia involucrata Dinv44491 GWHABJS00000014 - View
Davidia involucrata Dinv38406 GWHABJS00000016 - View
Durio zibethinus Duzib138G1549 NW_019167893.1 + View
Durio zibethinus Duzib212G0846 NW_019168026.1 - View
Eucalyptus grandis Eucgr.B01121 Chr02 - View
Eucalyptus grandis Eucgr.H03574 Chr08 - View
Erythranthe guttata Migut.D00284 scaffold_4 + View
Erythranthe guttata Migut.G00303 scaffold_7 + View
Erythranthe guttata Migut.N00156 scaffold_14 + View
Eutrema salsugineum Thhalv10013457m.g PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10020661m.g PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED scaffold_13 + View
Fragaria x ananassa FAN20G1327 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb2-3 + View
Fragaria x ananassa FAN12G3061 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb4-3 - View
Fragaria x ananassa FAN17G1704 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb4-2 + View
Fragaria x ananassa FAN15G1763 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb2-4 - View
Fragaria x ananassa FAN27G2840 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb2-1 - View
Fragaria x ananassa FAN22G0535 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb4-1 - View
Fragaria x ananassa FAN24G1740 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb2-2 + View
Fragaria vesca FvH4_4g14780 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb4 + View
Fragaria vesca FvH4_2g23720 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Fvb2 - View
Gossypium hirsutum Gohir.A11G122000 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED A11 + View
Gossypium hirsutum Gohir.A02G029400 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED A02 + View
Gossypium hirsutum Gohir.D02G037200 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED D02 + View
Gossypium hirsutum Gohir.D11G127200 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED D11 + View
Glycine max Glyma.15G105300 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Gm15 + View
Glycine max Glyma.19G154900 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Gm19 + View
Glycine max Glyma.07G257900 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Gm07 + View
Glycine max Glyma.17G016100 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Gm17 - View
Glycine max Glyma.03G152400 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Gm03 + View
Glycine max Glyma.13G207300 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Gm13 - View
Gossypium raimondii Gorai.007G135900 Chr07 + View
Gossypium raimondii Gorai.005G041100 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0995F.1_g245800 Hma1.2p1_0995F.1 - View
Lupinus albus Lalb_Chr18g0056151 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Lalb_Chr18 + View
Lotus japonicus Lj4g0019355 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED chr4 - View
Lotus japonicus Lj6g0022734 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED chr6 + View
Lotus japonicus Lj1g0023908 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED chr1 - View
Lonicera japonica Lj3C750G10 GWHAAZE00000003 - View
Magnolia biondii MBI17_g36353_MAGBIO AED:0.07 Chr17 - View
Malus domestica MD11G1287300 Plant protein of unknown function (DUF828) Chr11 - View
Malus domestica MD03G1266900 TRICHOME BIREFRINGENCE-LIKE 11 Chr03 - View
Malus domestica MD16G1186300 Plant protein of unknown function (DUF828) Chr16 + View
Malus domestica MD13G1185400 Plant protein of unknown function (DUF828) Chr13 + View
Manihot esculenta Manes.03G182900 Chromosome03 - View
Manihot esculenta Manes.05G075200 Chromosome05 + View
Manihot esculenta Manes.15G024500 Chromosome15 + View
Manihot esculenta Manes.01G208600 Chromosome01 - View
Medicago truncatula Medtr2g022560 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr2 + View
Medicago truncatula Medtr1g058380 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr1 + View
Medicago truncatula Medtr7g094750 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr7 + View
Nelumbo nucifera Nn4g26219 chr4 + View
Nelumbo nucifera Nn1g02185 chr1 + View
Nicotiana tabacum Nitab4.5_0000630g0040 PC-Esterase Nitab4.5_0000630 + View
Punica granatum PGR142G2405 NC_045128.1 + View
Punica granatum PGR004G2715 NC_045131.1 + View
Prunus persica Prupe.8G242600 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Pp08 - View
Prunus persica Prupe.1G153100 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Pp01 + View
Papaver somniferum PSO210G1272 NC_039359.1 - View
Papaver somniferum PSO832G0450 NC_039367.1 - View
Populus trichocarpa Potri.002G054400 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Chr02 - View
Populus trichocarpa Potri.008G203900 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Chr08 + View
Populus trichocarpa Potri.005G208301 PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Chr05 + View
Phaseolus vulgaris Phvul.006G152100 PF14416 - PMR5 N terminal Domain (PMR5N) Chr06 - View
Quercus lobata QL12p022105 12 - View
Quercus lobata QL06p003794 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0291221 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim02G0021000 chr02 + View
Rhododendron simsii Rhsim13G0024000 chr13 + View
Striga asiatica SGA_v2.0_scaffold39G15316 scaffold39 - View
Salvia bowleyana SalBow2G3465 GWHASIU00000007 - View
Salvia bowleyana SalBow4G1315 GWHASIU00000008 + View
Salix brachista Sabra02G0044200 GWHAAZH00000002 - View
Salix brachista Sabra08G0157800 GWHAAZH00000008 - View
Simmondsia chinensis Sc19g0004430 GWHAASQ00000019 - View
Sechium edule Sed0022315 LG04 + View
Sapria himalayana SHI00392 scaffold1_25991295 + View
Solanum lycopersicum Solyc07g042020.3 Protein trichome birefringence-like 16 (AHRD V3.3 *** A0A1U8H965_CAPAN) SL4.0ch07 + View
Solanum lycopersicum Solyc09g065030.3 Protein trichome birefringence-like 11 (AHRD V3.3 *** A0A2G2V2U5_CAPBA) SL4.0ch09 + View
Solanum lycopersicum Solyc01g079850.3 Protein trichome birefringence-like 11 (AHRD V3.3 *** A0A2G3DI26_CAPCH) SL4.0ch01 - View
Schrenkiella parvula Sp6g25200 PTHR32285//PTHR32285:SF65 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED ch6-6 - View
Solanum pennellii Sopen09g026770 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 11 Spenn-ch09 + View
Solanum pennellii Sopen01g031600 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 11 (TBL11) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400008990 Conserved gene of unknown function ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400001197 Conserved gene of unknown function ST4.03ch09 + View
Selenicereus undatus Hund12177 Scaffold_33679 - View
Trochodendron aralioides TAR633G1612 group2 - View
Trochodendron aralioides TAR362G0762 group17 + View
Theobroma cacao Thecc.04G224500 Trichome birefringence-like 11 Chromosome_4 + View
Theobroma cacao Thecc.01G280900 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104818803 protein trichome birefringence-like 10 NW_010966177.1 + View
Tripterygium wilfordii TWI09G0454 NC_052245.1 + View
Tripterygium wilfordii TWI73G0204 NC_052232.1 + View
Vaccinium macrocarpon vmacro15317 Similar to TBL10: Protein trichome birefringence-like 10 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02563 Similar to TBL11: Protein trichome birefringence-like 11 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G3040 CM024070.1 + View
Vigna mungo VMungo1215G0267 CM024074.1 + View
Vigna mungo VMungo0540G0462 CM024075.1 + View
Vitis vinifera GSVIVG01017904001 chr5 + View