Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0024154 PREDICTED: upstream activation factor subunit spp27-like isoform X3 [Nicotiana sylvestris] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G4470 LG-10 - View
Acer truncatum Atru.chr5.2817 chr5 - View
Acer truncatum Atru.chr3.426 chr3 - View
Actinidia chinensis Actinidia17847 Lachesis_group7 - View
Arabidopsis lyrata AL1G56870 scaffold_1 + View
Arabidopsis lyrata AL3G32450 scaffold_3 + View
Avicennia marina MSTRG.23778 ScioBoG_3895_HRSCAF_3912 - View
Aquilegia oxysepala Aqoxy6G00892 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CVNS8P PTHR13844:SF4 - PROTEIN K03B8.4-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT1G49520 SWIB complex BAF60b domain-containing protein SWIB complex BAF60b domain-containing protein%3B CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121)%2C SWIB domain (InterPro:IPR019835)%2C DEK%2C C-terminal (InterPro:IPR014876)%3B BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1)%3B Has 3197 Blast hits to 1975 proteins in 305 species: Archae - 0%3B Bacteria - 439%3B Metazoa - 696%3B Fungi - 468%3B Plants - 732%3B Viruses - 19%3B Other Eukaryotes - 843 (source: NCBI BLink). Chr1 + View
Brassica napus A03p41000 A03 + View
Brassica napus A05p30540 A05 - View
Brassica rapa BraA05t21892Z A05 - View
Beta vulgaris EL10Ac9g21819 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G322.36 PGAv.1.6.scaffold322 - View
Cannabis sativa CANSAT01G2960 NC_044373.1 - View
Coffea canephora Cc07_g05720 Putative Upstream activation factor subunit spp27 chr7 + View
Coffea canephora Cc02_g18450 Putative Upstream activation factor subunit spp27 chr2 + View
Citrus clementina Ciclev10028659m.g scaffold_8 - View
Citrus clementina Ciclev10026010m.g scaffold_7 + View
Cardamine hirsuta CARHR039550 SWIB/MDM2 domain containing protein Chr1 + View
Carya illinoinensis CiPaw.02G010400 PTHR13844//PTHR13844:SF4 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // PROTEIN K03B8.4-RELATED Chr02 - View
Corchorus olitorius COL.COLO4_11723 hypothetical protein AWUE01014740.1 - View
Carica papaya Cpa.g.sc62.52 supercontig_62 - View
Chenopodium quinoa AUR62016635 spp27: Upstream activation factor subunit spp27 C_Quinoa_Scaffold_3670 - View
Chenopodium quinoa AUR62011425 spp27: Upstream activation factor subunit spp27 C_Quinoa_Scaffold_3333 + View
Capsella rubella Carub.0001s3871 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED scaffold_1 + View
Daucus carota DCAR_010925 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv39894 GWHABJS00000014 + View
Durio zibethinus Duzib264G0886 NW_019167960.1 - View
Durio zibethinus Duzib132G0316 NW_019167915.1 + View
Erigeron canadensis ECA234G2777 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.I01179 Chr09 - View
Erythranthe guttata Migut.B00307 scaffold_2 + View
Erythranthe guttata Migut.H00467 scaffold_8 - View
Eutrema salsugineum Thhalv10020944m.g K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27) scaffold_13 - View
Fragaria x ananassa FAN24G0901 PTHR13844//PTHR13844:SF4 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // PROTEIN K03B8.4-RELATED Fvb2-2 + View
Fragaria x ananassa FAN27G2733 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Fvb2-1 - View
Fragaria x ananassa FAN20G0485 PTHR13844//PTHR13844:SF4 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // PROTEIN K03B8.4-RELATED Fvb2-3 + View
Fragaria vesca FvH4_2g06890 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Fvb2 - View
Gossypium hirsutum Gohir.A11G189600 K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27) A11 + View
Gossypium hirsutum Gohir.D02G212000 K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27) D02 + View
Gossypium hirsutum Gohir.A03G191000 K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27) A03 + View
Gossypium hirsutum Gohir.D11G196350 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED D11 + View
Glycine max Glyma.11G058700 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Gm11 - View
Glycine max Glyma.01G183600 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Gm01 + View
Gossypium raimondii Gorai.007G210300 Chr07 + View
Gossypium raimondii Gorai.005G239900 Chr05 + View
Lotus japonicus Lj2g0019864 PTHR13844//PTHR13844:SF4 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // PROTEIN K03B8.4-RELATED chr2 - View
Lonicera japonica Lj4C138G6 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_5_113480 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Lsat_1_v8_lg_5 + View
Magnolia biondii MBI16_g19912_MAGBIO AED:0.28 Chr16 - View
Malus domestica MD10G1089200 SWIB complex BAF60b domain-containing protein Chr10 + View
Manihot esculenta Manes.17G094566 Chromosome17 - View
Manihot esculenta Manes.15G143600 Chromosome15 - View
Medicago truncatula Medtr5g018010 upstream activation factor subunit UAF30, putative chr5 - View
Nicotiana tabacum Nitab4.5_0002462g0060 SWIB/MDM2 domain, Homeodomain-like, SWIB domain, DEK, C-terminal Nitab4.5_0002462 - View
Petunia axillaris Peaxi162Scf00016g10154 SWIB complex BAF60b domain-containing protein Peaxi162Scf00016 + View
Prunus persica Prupe.8G116100 Pp08 + View
Pisum sativum Psat2g164800 SWIB/MDM2 domain chr2LG1 + View
Papaver somniferum PSO541G1265 NC_039363.1 + View
Papaver somniferum PSO675G0901 NC_039358.1 + View
Populus trichocarpa Potri.005G134500 K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27) Chr05 + View
Populus trichocarpa Potri.007G039350 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Chr07 + View
Populus trichocarpa Potri.009G106700 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Chr09 - View
Populus trichocarpa Potri.004G145200 K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27) Chr04 - View
Phaseolus vulgaris Phvul.002G021500 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED Chr02 - View
Quercus lobata QL06p042760 6 - View
Quercus lobata QL11p038399 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0259201 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim08G0104200 chr08 - View
Rhododendron simsii Rhsim05G0080300 chr05 + View
Striga asiatica SGA_v2.0_scaffold58G20605 scaffold58 + View
Striga asiatica SGA_v2.0_scaffold15G07245 scaffold15 + View
Salix brachista Sabra04G0096200 GWHAAZH00000004 - View
Salix brachista Sabra09G0081500 GWHAAZH00000009 - View
Sechium edule Sed0023407 LG05 - View
Solanum lycopersicum Solyc01g108290.3 SWIB/MDM2 domain containing protein (AHRD V3.3 *** B6SZA4_MAIZE) SL4.0ch01 + View
Schrenkiella parvula Sp3g17160 PTHR13844:SF4 - PROTEIN K03B8.4-RELATED ch3-1 + View
Solanum pennellii Sopen01g050510 SWIB complex BAF60b domain-containing protein | CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain , SWIB domain , DEK, C-terminal | BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400025800 Upstream activation factor subunit UAF30 ST4.03ch01 + View
Selenicereus undatus Hund06188 Scaffold_33676 - View
Selenicereus undatus Hund13580 Scaffold_33679 - View
Trochodendron aralioides TAR628G1648 group5 + View
Trochodendron aralioides TAR376G0084 group14 - View
Theobroma cacao Thecc.01G050600 SWIB complex BAF60b domain-containing protein Chromosome_1 + View
Theobroma cacao Thecc.02G095500 SWIB complex BAF60b domain-containing protein Chromosome_2 + View
Tripterygium wilfordii TWI09G1604 NC_052245.1 + View
Vigna mungo VMungo1215G2818 CM024074.1 - View
Vitis vinifera GSVIVG01031805001 chr3 - View
Zea mays Zm00001eb058450 Zm00001e005782 SWIB complex BAF60b domain-containing protein 1 + View
Zea mays Zm00001eb214210 Zm00001e011981 SWIB/MDM2 domain containing protein 5 - View