Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0036925 PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G14010 LG-6 - View
Acer truncatum Atru.chr3.322 chr3 + View
Actinidia chinensis Actinidia16480 Lachesis_group25 - View
Actinidia chinensis Actinidia12050 Lachesis_group11 + View
Actinidia chinensis Actinidia36489 Lachesis_group4 + View
Arabidopsis lyrata AL7G13730 scaffold_7 + View
Avicennia marina MSTRG.23743 ScioBoG_3895_HRSCAF_3912 + View
Aquilegia oxysepala Aqoxy6G01305 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E12FQJ PTHR24012:SF476 - MSI2 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H8SGQ8 PTHR24012:SF476 - MSI2 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G36960 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G07810.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaNung05425 Contig2015 - View
Brassica carinata BcaNung02522 Contig886 - View
Brassica napus A03p64850 A03 - View
Brassica napus C07p62210 C07 - View
Brassica napus C01p01960 C01 + View
Brassica napus A01p01830 A01 + View
Brassica oleracea BolC1t00190H C1 + View
Brassica oleracea BolC7t46637H C7 - View
Brassica rapa BraA03t15548Z A03 - View
Brassica rapa BraA01t00172Z A01 + View
Beta vulgaris EL10Ac6g15740 PTHR24012//PTHR24012:SF476 - FAMILY NOT NAMED // MSI2 PROTEIN-RELATED Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT01G2142 NC_044373.1 - View
Cicer arietinum L. Ca_22160_v3 Ca_LG7_v3 + View
Corylus avellana Haze_15393 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc07_g06030 Putative Heterogeneous nuclear ribonucleoprotein 27C chr7 - View
Citrus clementina Ciclev10025943m.g scaffold_7 - View
Cardamine hirsuta CARHR245540 RNA-binding protein, putative Chr7 - View
Carya illinoinensis CiPaw.01G017700 PTHR24012//PTHR24012:SF476 - FAMILY NOT NAMED // MSI2 PROTEIN-RELATED Chr01 + View
Citrullus lanatus ClCG02G012740 RNA-binding protein, putative CG_Chr02 + View
Cucumis melo MELO3C020894.2 RNA-binding protein, putative chr11 - View
Corchorus olitorius COL.COLO4_11423 hypothetical protein AWUE01014695.1 - View
Carica papaya Cpa.g.sc55.144 supercontig_55 + View
Chenopodium quinoa AUR62001924 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_4480 - View
Chenopodium quinoa AUR62003886 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_2370 + View
Capsella rubella Carub.0007s0315 KOG0145 - RNA-binding protein ELAV/HU (RRM superfamily) scaffold_7 + View
Daucus carota DCAR_025736 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_010891 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv29988 GWHABJS00000502 + View
Davidia involucrata Dinv39842 GWHABJS00000014 - View
Durio zibethinus Duzib187G1459 NW_019167860.1 + View
Durio zibethinus Duzib264G0729 NW_019167960.1 + View
Erigeron canadensis ECA246G0492 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.I00920 Chr09 + View
Eucalyptus grandis Eucgr.H01665 Chr08 - View
Erythranthe guttata Migut.H00429 scaffold_8 + View
Eutrema salsugineum Thhalv10025462m.g K14411 - RNA-binding protein Musashi (MSI) scaffold_1 + View
Fragaria x ananassa FAN28G2221 PTHR24012:SF476 - MSI2 PROTEIN-RELATED Fvb1-1 + View
Fragaria x ananassa FAN19G1087 PTHR24012//PTHR24012:SF476 - FAMILY NOT NAMED // MSI2 PROTEIN-RELATED Fvb1-4 - View
Fragaria x ananassa FAN26G0644 PTHR24012:SF476 - MSI2 PROTEIN-RELATED Fvb1-2 - View
Fragaria x ananassa FAN23G1456 K14411 - RNA-binding protein Musashi (MSI) Fvb1-3 - View
Fragaria vesca FvH4_1g16100 PTHR24012//PTHR24012:SF437//PTHR24012:SF476 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // MSI2 PROTEIN-RELATED Fvb1 - View
Gossypium hirsutum Gohir.D12G069700 K14411 - RNA-binding protein Musashi (MSI) D12 + View
Gossypium hirsutum Gohir.D11G199400 K14411 - RNA-binding protein Musashi (MSI) D11 - View
Gossypium hirsutum Gohir.A12G071600 K14411 - RNA-binding protein Musashi (MSI) A12 - View
Gossypium hirsutum Gohir.A11G192700 K14411 - RNA-binding protein Musashi (MSI) A11 - View
Glycine max Glyma.11G055500 K14411 - RNA-binding protein Musashi (MSI) Gm11 + View
Glycine max Glyma.01G186400 K14411 - RNA-binding protein Musashi (MSI) Gm01 - View
Gossypium raimondii Gorai.007G213600 Chr07 - View
Gossypium raimondii Gorai.008G076700 Chr08 - View
Helianthus annuus HanXRQChr12g0378861 Probable RNA-binding (RRM/RBD/RNP motifs) family protein HanXRQChr12 - View
Hydrangea macrophylla Hma1.2p1_0017F.1_g011430 Hma1.2p1_0017F.1 - View
Lupinus albus Lalb_Chr05g0226561 KOG0114 - Predicted RNA-binding protein (RRM superfamily) Lalb_Chr05 + View
Lotus japonicus Lj4g0013369 K14411 - RNA-binding protein Musashi (MSI) chr4 - View
Lotus japonicus Lj2g0002373 PTHR24012:SF476 - MSI2 PROTEIN-RELATED chr2 + View
Lonicera japonica Lj4C150T3 GWHAAZE00000004 - View
Lonicera japonica Lj7A70T82 GWHAAZE00000007 - View
Magnolia biondii MBI03_g13480_MAGBIO AED:0.40 Chr03 - View
Malus domestica MD02G1172600 RNA-binding (RRM/RBD/RNP motifs) family protein Chr02 - View
Malus domestica MD15G1284600 RNA-binding (RRM/RBD/RNP motifs) family protein Chr15 - View
Manihot esculenta Manes.12G099600 Chromosome12 + View
Manihot esculenta Manes.13G123900 Chromosome13 + View
Medicago truncatula Medtr5g017280 RNA-binding (RRM/RBD/RNP motif) family protein chr5 + View
Nelumbo nucifera Nn1g04835 chr1 + View
Nicotiana tabacum Nitab4.5_0003298g0020 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait Nitab4.5_0003298 - View
Olea europaea Oeu014840.1 chr10 + View
Olea europaea Oeu031958.1 scaffold2661 - View
Petunia axillaris Peaxi162Scf00450g00320 RNA-binding (RRM/RBD/RNP motifs) family protein Peaxi162Scf00450 + View
Punica granatum PGR102G1302 NC_045129.1 + View
Prunus persica Prupe.7G132900 KOG0145//KOG0148 - RNA-binding protein ELAV/HU (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Pp07 + View
Pisum sativum Psat2g167480 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr2LG1 - View
Pisum sativum Psat4g086680 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr4LG4 + View
Papaver somniferum PSO541G5519 NC_039363.1 - View
Papaver somniferum PSO675G1732 NC_039358.1 - View
Populus trichocarpa Potri.005G138600 KOG0145//KOG4205 - RNA-binding protein ELAV/HU (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Chr05 - View
Populus trichocarpa Potri.007G044400 K14411 - RNA-binding protein Musashi (MSI) Chr07 - View
Phaseolus vulgaris Phvul.002G018500 KOG0145 - RNA-binding protein ELAV/HU (RRM superfamily) Chr02 + View
Quercus lobata QL06p041296 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0105721 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0100200 chr08 + View
Salix brachista Sabra07G0039300 GWHAAZH00000007 - View
Simmondsia chinensis Sc03g0001610 GWHAASQ00000003 + View
Simmondsia chinensis Sc07g0000770 GWHAASQ00000007 - View
Sechium edule Sed0017310 LG01 - View
Solanum lycopersicum Solyc02g090910.3 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1NV59_ARTAN) SL4.0ch02 - View
Schrenkiella parvula Sp7g34800 K14411 - RNA-binding protein Musashi (MSI) ch7-6 - View
Solanum pennellii Sopen02g035560 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG401004019 RNA-binding protein ST4.03ch02 + View
Selenicereus undatus Hund13549 Scaffold_33679 - View
Trochodendron aralioides TAR625G0268 group4 - View
Theobroma cacao Thecc.01G056700 RNA-binding (RRM/RBD/RNP motifs) family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807586 RNA-binding protein Musashi homolog 2 NW_010963495.1 - View
Trifolium pratense TPR.G19074 Tp57577_TGAC_v2_LG1 + View
Trifolium pratense TPR.G30698 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI09G1528 NC_052245.1 - View
Tripterygium wilfordii TWI73G0782 NC_052232.1 + View
Utricularia gibba unitig_899.g14666 unitig_899 - View
Utricularia gibba unitig_736.g22666 unitig_736 - View
Vaccinium macrocarpon vmacro05342 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3228 CM024074.1 + View
Vitis vinifera GSVIVG01022126001 chr7 + View