Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0034754 PREDICTED: small ubiquitin-related modifier 1-like [Eucalyptus grandis] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G4420 LG-5 + View
Acer truncatum Atru.chr4.1677 chr4 - View
Arabidopsis lyrata AL4G28210 scaffold_4 + View
Arabidopsis thaliana AT2G32765 small ubiquitinrelated modifier 5 Encodes a small ubiquitin-like modifier (SUMO) protein that becomes covalently attached to various intracellular protein targets through an isopeptide bond. SUMOylation typically has a post-translational effect on the behavior of the target protein. small ubiquitinrelated modifier 5 (SUMO5)%3B FUNCTIONS IN: protein tag%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 2 (TAIR:AT5G55160.1)%3B Has 967 Blast hits to 966 proteins in 223 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 573%3B Fungi - 118%3B Plants - 165%3B Viruses - 1%3B Other Eukaryotes - 110 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G48700 Ubiquitin-like superfamily protein Ubiquitin-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G48710.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g30765 ChrC06 + View
Brassica carinata BcaB06g28633 ChrB06 + View
Brassica carinata BcaB02g10498 ChrB02 + View
Brassica napus A05p12840 A05 - View
Brassica napus A04p25290 A04 + View
Brassica napus C03p21370 C03 + View
Brassica napus C09p04910 C09 - View
Brassica napus A03p18320 A03 + View
Brassica oleracea BolC3t14520H C3 + View
Brassica rapa BraA05t20223Z A05 - View
Brassica rapa BraA03t11092Z A03 + View
Beta vulgaris EL10Ac7g17862 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Chr7_EL10_PGA_scaffold5 - View
Cannabis sativa CANSAT01G3115 NC_044373.1 + View
Corylus avellana Haze_24819 Similar to SUMO2: Small ubiquitin-related modifier 2 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc01_g16880 Small ubiquitin-related modifier 1 chr1 + View
Citrus clementina Ciclev10022993m.g scaffold_3 + View
Carpinus fangiana Cfa002583 Cfa01 - View
Cardamine hirsuta CARHR126660 small ubiquitin-like modifier 1 Chr4 + View
Carya illinoinensis CiPaw.04G104500 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Chr04 + View
Carya illinoinensis CiPaw.03G147900 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Chr03 + View
Carica papaya Cpa.g.sc8.137 supercontig_8 + View
Chenopodium quinoa AUR62001106 SUMO2: Small ubiquitin-related modifier 2 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62008930 SUMO2: Small ubiquitin-related modifier 2 C_Quinoa_Scaffold_1710 - View
Capsella rubella Carub.0004s1413 K12160 - small ubiquitin-related modifier (SUMO, SMT3) scaffold_4 + View
Capsella rubella Carub.0008s0844 PTHR10562 - SMALL UBIQUITIN-RELATED MODIFIER scaffold_8 + View
Daucus carota DCAR_012654 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv27230 GWHABJS00000014 - View
Davidia involucrata Dinv12669 GWHABJS00000007 + View
Davidia involucrata Dinv19190 GWHABJS00000010 - View
Durio zibethinus Duzib133G0853 NW_019167938.1 - View
Durio zibethinus Duzib138G1755 NW_019167893.1 - View
Durio zibethinus Duzib268G1324 NW_019168270.1 + View
Durio zibethinus Duzib211G0699 NW_019168049.1 - View
Erigeron canadensis ECA236G1058 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.H00789 Chr08 + View
Eucalyptus grandis Eucgr.H00049 Chr08 + View
Eutrema salsugineum Thhalv10005530m.g K12160 - small ubiquitin-related modifier (SUMO, SMT3) scaffold_6 + View
Fragaria x ananassa FAN24G1775 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Fvb2-2 - View
Fragaria x ananassa FAN15G0792 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Fvb2-4 + View
Fragaria x ananassa FAN27G3469 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Fvb2-1 + View
Fragaria vesca FvH4_2g18770 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Fvb2 + View
Glycine max Glyma.08G350600 PTHR10562//PTHR10562:SF26 - SMALL UBIQUITIN-RELATED MODIFIER // SUBFAMILY NOT NAMED Gm08 + View
Glycine max Glyma.18G165200 PTHR10562//PTHR10562:SF26 - SMALL UBIQUITIN-RELATED MODIFIER // SUBFAMILY NOT NAMED Gm18 - View
Helianthus annuus HanXRQChr04g0108201 Probable small ubiquitin-like modifier 2 HanXRQChr04 + View
Lupinus albus Lalb_Chr03g0041621 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Lalb_Chr03 + View
Lactuca sativa Lsat_1_v5_gn_8_89420 Lsat_1_v8_lg_8 - View
Malus domestica MD05G1173700 small ubiquitin-like modifier 1 Chr05 + View
Malus domestica MD10G1161600 small ubiquitin-like modifier 1 Chr10 + View
Manihot esculenta Manes.13G046700 Chromosome13 + View
Manihot esculenta Manes.15G054500 Chromosome15 - View
Nelumbo nucifera Nn1g07908 chr1 - View
Nicotiana tabacum Nitab4.5_0000045g0350 Rad60/SUMO-like domain, Ubiquitin domain, Ubiquitin supergroup Nitab4.5_0000045 + View
Punica granatum PGR083G0399 NC_045133.1 + View
Prunus persica Prupe.8G201100 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Pp08 + View
Populus trichocarpa Potri.014G190300 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Chr14 - View
Phaseolus vulgaris Phvul.008G129000 K12160 - small ubiquitin-related modifier (SUMO, SMT3) Chr08 - View
Quercus lobata QL09p053151 9 + View
Rosa chinensis RcHm_v2.0_Chr6g0284511 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim01G0255000 chr01 + View
Rhododendron simsii Rhsim09G0057600 chr09 - View
Solanum lycopersicum Solyc09g059970.3 Small ubiquitin-related modifier (AHRD V3.3 *** A0A218VRF2_PUNGR) SL4.0ch09 + View
Schrenkiella parvula Sp2g19110 K12160 - small ubiquitin-related modifier (SUMO, SMT3) ch2-4 - View
Schrenkiella parvula Sp4g15110 K12160 - small ubiquitin-related modifier (SUMO, SMT3) ch4-6 + View
Solanum pennellii Sopen09g023150 Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | small ubiquitin-like modifier 2 (SUMO2) | CONTAINS InterPro DOMAIN/s: Ubiquitin , Ubiquitin supergroup | BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 1 Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400023103 SUMO protein ST4.03ch09 + View
Selenicereus undatus Hund05566 Scaffold_19641 - View
Selenicereus undatus Hund18403 Scaffold_33675 - View
Trochodendron aralioides TAR633G1651 group2 - View
Trochodendron aralioides TAR362G0265 group17 + View
Trochodendron aralioides TAR365G0350 group16 + View
Theobroma cacao Thecc.01G223500 Small ubiquitin-like modifier 1 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104818963 small ubiquitin-related modifier 1-like NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104802664 small ubiquitin-related modifier 2-like NW_010970490.1 - View
Tripterygium wilfordii TWI75G0206 NC_052253.1 + View
Tripterygium wilfordii TWI36G0601 NC_052237.1 + View
Tripterygium wilfordii TWI18G0586 NC_052241.1 - View
Vaccinium macrocarpon vmacro00463 Similar to SUMO2: Small ubiquitin-related modifier 2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14745 Similar to SUMO2: Small ubiquitin-related modifier 2 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0346 CM024070.1 - View
Vitis vinifera GSVIVG01003301001 chrUn + View