Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004519 PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G10820 LG-9 + View
Acer truncatum Atru.chr1.404 chr1 - View
Actinidia chinensis Actinidia25893 Lachesis_group22 - View
Actinidia chinensis Actinidia20879 Lachesis_group6 - View
Actinidia chinensis Actinidia14570 Lachesis_group6 - View
Arabidopsis lyrata AL7G30030 scaffold_7 - View
Arabidopsis lyrata AL6G45860 scaffold_6 - View
Avicennia marina MSTRG.13845 ScioBoG_18778_HRSCAF_18863 + View
Amaranthus hybridus Ah.07g206850 AmaHy_arrow1_Scaffold_7 - View
Aquilegia oxysepala Aqoxy7G00288 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RYWV6H 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QYL6GS K19329 - WW domain-containing oxidoreductase (WWOX) arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XU9J8D K19329 - WW domain-containing oxidoreductase (WWOX) arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VSC23Z 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EU6R2M 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6K3EFY K19329 - WW domain-containing oxidoreductase (WWOX) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT4G23420 NAD(P)-binding Rossmann-fold superfamily protein NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C binding%2C catalytic activity%3B INVOLVED IN: oxidation reduction%2C metabolic process%3B CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040)%2C Glucose/ribitol dehydrogenase (InterPro:IPR002347)%2C Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198)%3B BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2)%3B Has 55665 Blast hits to 55601 proteins in 3020 species: Archae - 461%3B Bacteria - 37265%3B Metazoa - 4181%3B Fungi - 3321%3B Plants - 1828%3B Viruses - 0%3B Other Eukaryotes - 8609 (source: NCBI BLink). NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C binding%2C catalytic activity%3B INVOLVED IN: oxidation reduction%2C metabolic process%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040)%2C Glucose/ribitol dehydrogenase (InterPro:IPR002347)%2C Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198)%3B BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2). Chr4 + View
Arabidopsis thaliana AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein NAD(P)-binding Rossmann-fold superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C binding%2C catalytic activity%3B INVOLVED IN: oxidation reduction%2C metabolic process%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040)%2C Glucose/ribitol dehydrogenase (InterPro:IPR002347)%2C Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198)%3B BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23430.2)%3B Has 42058 Blast hits to 41993 proteins in 2806 species: Archae - 320%3B Bacteria - 26803%3B Metazoa - 3444%3B Fungi - 2870%3B Plants - 1627%3B Viruses - 0%3B Other Eukaryotes - 6994 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0680G311 AmTr_v1.0_scaffold00009 - View
Brassica carinata BcaC09g51002 ChrC09 - View
Brassica carinata BcaB01g01650 ChrB01 - View
Brassica napus C09p35010 C09 + View
Brassica napus A09p27660 A09 + View
Brassica napus A01p14620 A01 + View
Brassica napus C01p18130 C01 + View
Brassica oleracea BolC1t01740H C1 + View
Brassica oleracea BolC9t56347H C9 + View
Brassica rapa BraA01t01403Z A01 + View
Beta vulgaris EL10Ac5g12789 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G774.56 PGAv.1.6.scaffold774 + View
Cicer arietinum L. Ca_17522_v3 Ca_LG6_v3 - View
Cicer arietinum L. Ca_10739_v3 Ca_LG4_v3 - View
Corylus avellana Haze_08792 Similar to TIC32: Short-chain dehydrogenase TIC 32, chloroplastic (Arabidopsis thaliana OX%3D3702) 4 + View
Corylus avellana Haze_00017 Similar to TIC32: Short-chain dehydrogenase TIC 32, chloroplastic (Pisum sativum OX%3D3888) 1 + View
Coffea canephora Cc02_g02630 Short-chain dehydrogenase TIC 32, chloroplastic chr2 - View
Coffea canephora Cc08_g14860 Short-chain dehydrogenase TIC 32, chloroplastic chr8 + View
Carpinus fangiana Cfa012217 Cfa05 - View
Cardamine hirsuta CARHR230760 Short-chain dehydrogenase/reductase family protein Chr7 + View
Cardamine hirsuta CARHR255160 Short-chain dehydrogenase/reductase family protein Chr8 + View
Carya illinoinensis CiPaw.11G134000 K19329 - WW domain-containing oxidoreductase (WWOX) Chr11 - View
Citrullus lanatus ClCG07G008100 Short-chain dehydrogenase/reductase family protein CG_Chr07 + View
Cucumis melo MELO3C016354.2 Short-chain dehydrogenase TIC 32, chloroplastic chr07 + View
Carica papaya Cpa.g.sc74.2 supercontig_74 - View
Carica papaya Cpa.g.sc107.79 supercontig_107 + View
Chenopodium quinoa AUR62021151 Protein of unknown function C_Quinoa_Scaffold_1783 - View
Chenopodium quinoa AUR62010693 TIC32: Short-chain dehydrogenase TIC 32, chloroplastic C_Quinoa_Scaffold_1280 + View
Chenopodium quinoa AUR62017189 TIC32: Short-chain dehydrogenase TIC 32, chloroplastic C_Quinoa_Scaffold_3489 - View
Capsella rubella Carub.0006s3035 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase scaffold_6 - View
Cucumis sativus L. CsaV3_4G005940 short-chain dehydrogenase TIC 32, chloroplastic-like chr4 - View
Daucus carota DCAR_000622 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_004625 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_008377 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_006735 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv37629 GWHABJS00000017 - View
Durio zibethinus Duzib205G1864 NW_019168381.1 + View
Durio zibethinus Duzib205G0277 NW_019168381.1 + View
Durio zibethinus Duzib068G0479 NW_019167838.1 + View
Erigeron canadensis ECA233G1969 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA240G2398 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA232G1129 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA246G4055 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.A02763 Chr01 - View
Erythranthe guttata Migut.E01084 scaffold_5 - View
Erythranthe guttata Migut.F00323 scaffold_6 - View
Erythranthe guttata Migut.F01100 scaffold_6 - View
Eutrema salsugineum Thhalv10025732m.g PTHR24320:SF83 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10028811m.g 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase scaffold_3 + View
Fragaria x ananassa FAN03G0070 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb7-3 - View
Fragaria x ananassa FAN08G3379 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb5-3 - View
Fragaria x ananassa FAN13G0445 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb5-2 + View
Fragaria x ananassa FAN06G2585 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb7-2 + View
Fragaria x ananassa FAN03G1634 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb7-3 - View
Fragaria x ananassa FAN01G2634 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb7-4 - View
Fragaria x ananassa FAN06G2317 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb7-2 + View
Fragaria x ananassa FAN04G1371 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb5-4 + View
Fragaria x ananassa FAN18G0711 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb5-1 + View
Fragaria vesca FvH4_7g29900 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Fvb7 + View
Fragaria vesca FvH4_5g02640 KOG1208//KOG1611 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) // Predicted short chain-type dehydrogenase Fvb5 + View
Gossypium hirsutum Gohir.D03G150500 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase D03 - View
Gossypium hirsutum Gohir.A03G017100 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase A03 + View
Gossypium hirsutum Gohir.D08G201832 KOG1611 - Predicted short chain-type dehydrogenase D08 + View
Glycine max Glyma.08G015400 K19329 - WW domain-containing oxidoreductase (WWOX) Gm08 + View
Glycine max Glyma.16G181100 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Gm16 - View
Glycine max Glyma.09G135200 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Gm09 - View
Glycine max Glyma.20G161200 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Gm20 + View
Glycine max Glyma.10G233100 K19329 - WW domain-containing oxidoreductase (WWOX) Gm10 - View
Glycine max Glyma.05G208800 K19329 - WW domain-containing oxidoreductase (WWOX) Gm05 + View
Gossypium raimondii Gorai.003G157700 Chr03 - View
Gossypium raimondii Gorai.004G213100 Chr04 + View
Helianthus annuus HanXRQChr17g0533591 Probable NAD(P)-binding Rossmann-fold superfamily protein HanXRQChr17 - View
Helianthus annuus HanXRQChr03g0086771 Putative glucose/ribitol dehydrogenase HanXRQChr03 - View
Helianthus annuus HanXRQChr06g0165901 Putative glucose/ribitol dehydrogenase HanXRQChr06 + View
Hydrangea macrophylla Hma1.2p1_1123F.1_g259510 Hma1.2p1_1123F.1 - View
Lupinus albus Lalb_Chr05g0224691 K19329 - WW domain-containing oxidoreductase (WWOX) Lalb_Chr05 - View
Lotus japonicus Lj4g0007823 K19329 - WW domain-containing oxidoreductase (WWOX) chr4 - View
Lotus japonicus Lj2g0021998 K19329 - WW domain-containing oxidoreductase (WWOX) chr2 + View
Lonicera japonica Lj2C183T9 GWHAAZE00000002 - View
Lonicera japonica Lj8A220G78 GWHAAZE00000008 + View
Lonicera japonica Lj8A21T39 GWHAAZE00000008 - View
Lonicera japonica Lj1C1001T8 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_6_86521 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_3_6681 K19329 - WW domain-containing oxidoreductase (WWOX) Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_6_5561 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Lsat_1_v8_lg_6 - View
Malus domestica MD14G1106600 NAD(P)-binding Rossmann-fold superfamily protein Chr14 + View
Malus domestica MD06G1085800 NAD(P)-binding Rossmann-fold superfamily protein Chr06 + View
Malus domestica MD01G1205400 NAD(P)-binding Rossmann-fold superfamily protein Chr01 + View
Malus domestica MD07G1274000 NAD(P)-binding Rossmann-fold superfamily protein Chr07 + View
Manihot esculenta Manes.06G150100 Chromosome06 + View
Manihot esculenta Manes.02G020300 Chromosome02 + View
Manihot esculenta Manes.14G024400 Chromosome14 - View
Manihot esculenta Manes.01G059700 Chromosome01 + View
Medicago truncatula Medtr1g100305 NAD(P)-binding rossmann-fold protein chr1 - View
Medicago truncatula Medtr8g098415 NAD(P)-binding rossmann-fold protein chr8 + View
Nicotiana tabacum Nitab4.5_0001615g0060 Unknown Nitab4.5_0001615 - View
Punica granatum PGR031G1447 NC_045127.1 - View
Punica granatum PGR042G3782 NC_045130.1 + View
Prunus persica Prupe.2G298000 Pp02 + View
Prunus persica Prupe.5G101600 PTHR24320:SF83 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED Pp05 + View
Pisum sativum Psat7g032840 Short chain dehydrogenase chr7LG7 + View
Populus trichocarpa Potri.015G146600 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Chr15 + View
Populus trichocarpa Potri.003G128700 PTHR24320//PTHR24320:SF83 - FAMILY NOT NAMED // NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED Chr03 + View
Populus trichocarpa Potri.012G143600 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Chr12 + View
Populus trichocarpa Potri.001G103000 K19329 - WW domain-containing oxidoreductase (WWOX) Chr01 - View
Phaseolus vulgaris Phvul.007G072600 Chr07 + View
Phaseolus vulgaris Phvul.004G112100 Chr04 - View
Phaseolus vulgaris Phvul.002G290500 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Chr02 + View
Quercus lobata QL09p013692 9 - View
Quercus lobata QL12p032651 12 - View
Rosa chinensis RcHm_v2.0_Chr1g0377861 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr7g0197221 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim03G0188500 chr03 + View
Rhododendron simsii Rhsim07G0089700 chr07 - View
Rhododendron simsii Rhsim02G0232100 chr02 + View
Striga asiatica SGA_v2.0_scaffold60G21079 scaffold60 + View
Salvia bowleyana SalBow2G0228 GWHASIU00000007 - View
Salvia bowleyana SalBow1G7919 GWHASIU00000001 + View
Salix brachista Sabra01G0077800 GWHAAZH00000001 - View
Salix brachista Sabra03G0091600 GWHAAZH00000003 + View
Simmondsia chinensis Sc22g0005570 GWHAASQ00000022 - View
Solanum lycopersicum Solyc08g081200.3 Short-chain dehydrogenase TIC 32, chloroplastic (AHRD V3.3 *** A0A2G2XJP0_CAPBA) SL4.0ch08 + View
Schrenkiella parvula Sp7g21330 PTHR24320//PTHR24320:SF83 - FAMILY NOT NAMED // NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN-RELATED ch7-4 + View
Solanum pennellii Sopen08g029500 NAD(P)-binding Rossmann-fold superfamily protein | FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity | INVOLVED IN: oxidation reduction, metabolic process | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain , Glucose/ribitol dehydrogenase , Short-chain dehydrogenase/reductase SDR | BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein Spenn-ch08 + View
Solanum pennellii Sopen03g004210 NAD(P)-binding Rossmann-fold superfamily protein | FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity | INVOLVED IN: oxidation reduction, metabolic process | LOCATED IN: chloroplast | CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain , Glucose/ribitol dehydrogenase , Short-chain dehydrogenase/reductase SDR | BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein ., NAD(P)-binding domain, Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) - Hordeum vulgare (Barley) Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400012336 Short-chain dehydrogenase ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG401015792 Short-chain dehydrogenase ST4.03ch03 + View
Selenicereus undatus Hund04770 Scaffold_19641 + View
Selenicereus undatus Hund11461 Scaffold_10417 - View
Trochodendron aralioides TAR375G1008 group15 + View
Trochodendron aralioides TAR374G0966 group12 + View
Theobroma cacao Thecc.03G180300 Chromosome_3 + View
Theobroma cacao Thecc.03G280500 NAD(P)-binding Rossmann-fold superfamily protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104813021 short-chain dehydrogenase TIC 32%2C chloroplastic isoform X2 NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104806413 short-chain dehydrogenase TIC 32%2C chloroplastic-like isoform X1 NW_010962392.1 + View
Trifolium pratense TPR.G12927 Tp57577_TGAC_v2_LG3 + View
Trifolium pratense TPR.G26998 Tp57577_TGAC_v2_LG1 - View
Vaccinium macrocarpon vmacro06651 Similar to TIC32: Short-chain dehydrogenase TIC 32, chloroplastic (Pisum sativum OX%3D3888) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro11370 Similar to TIC32: Short-chain dehydrogenase TIC 32, chloroplastic (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G3493 CM024069.1 + View
Vigna mungo VMungo0720G2602 CM024071.1 - View
Vitis vinifera GSVIVG01028905001 chr16 + View
Vitis vinifera GSVIVG01019741001 chr2 - View