Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0027339 PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Vitis vinifera] Chr1 - View
CSS0039791 unnamed protein product [Coffea canephora] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G10890 LG-10 - View
Acer truncatum Atru.chr12.39 chr12 - View
Acer truncatum Atru.chr8.2248 chr8 - View
Actinidia chinensis Actinidia00952 Lachesis_group3 - View
Actinidia chinensis Actinidia13939 Lachesis_group21 - View
Arabidopsis lyrata AL5G37240 scaffold_5 - View
Amaranthus hybridus Ah.16g103540 Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (EC 3.1.3.16) (Nuclear LIM interactor-interacting factor 3) (NLI-IF) (NLI-interacting factor 3) (Small C-terminal domain phosphatase 1) (SCP1) (Small CTD phosphatase 1) AmaHy_arrow1_Scaffold_16 + View
Amaranthus hybridus Ah.10g036560 Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog (EC 2.7.12.1) AmaHy_arrow1_Scaffold_10 - View
Aquilegia oxysepala Aqoxy2G00880 CHR02 + View
Aquilegia oxysepala Aqoxy4G02549 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PEV2PF K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HUTA2K PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V7QVFI PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EVJ1Y4 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT3G55960 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Haloacid dehalogenase-like hydrolase (HAD) superfamily protein%3B FUNCTIONS IN: phosphatase activity%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948)%2C NLI interacting factor (InterPro:IPR004274)%3B BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1)%3B Has 2169 Blast hits to 2162 proteins in 238 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 723%3B Fungi - 425%3B Plants - 384%3B Viruses - 0%3B Other Eukaryotes - 637 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB06g29132 ChrB06 - View
Brassica carinata BcaC01g05430 ChrC01 + View
Brassica carinata BcaC07g39913 ChrC07 - View
Brassica carinata BcaB01g00047 ChrB01 + View
Brassica napus A09p48910 A09 - View
Brassica napus C08p31270 C08 - View
Brassica napus C04p67820 C04 - View
Brassica napus A04p30000 A04 + View
Brassica oleracea BolC4t28287H C4 - View
Brassica oleracea BolC8t50748H C8 - View
Brassica rapa BraA09t40346Z A09 - View
Brassica rapa BraA04t18507Z A04 - View
Beta vulgaris EL10Ac2g04835 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Chr2_EL10_PGA_scaffold6 - View
Cannabis sativa CANSAT35G1677 NC_044378.1 + View
Cannabis sativa CANSAT56G1476 NC_044371.1 - View
Cicer arietinum L. Ca_05963_v3 Ca_LG2_v3 - View
Corylus avellana Haze_17229 Similar to TIM50: Mitochondrial import inner membrane translocase subunit TIM50 (Arabidopsis thaliana OX%3D3702) 11 - View
Corylus avellana Haze_21007 Similar to TIM50: Mitochondrial import inner membrane translocase subunit TIM50 (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc02_g06480 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein chr2 + View
Citrus clementina Ciclev10012210m.g scaffold_6 - View
Citrus clementina Ciclev10031856m.g scaffold_4 - View
Carpinus fangiana Cfa001315 Cfa01 + View
Carpinus fangiana Cfa017201 Cfa07 + View
Cardamine hirsuta CARHR166040 CTD small phosphatase-like protein Chr5 - View
Carya illinoinensis CiPaw.02G192600 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Chr02 - View
Carya illinoinensis CiPaw.01G298900 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Chr01 - View
Carya illinoinensis CiPaw.09G209600 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Chr09 - View
Citrullus lanatus ClCG10G022140 CTD small phosphatase-like protein CG_Chr10 - View
Citrullus lanatus ClCG07G004200 CTD small phosphatase-like protein CG_Chr07 - View
Cucumis melo MELO3C025196.2 CTD small phosphatase-like protein chr10 - View
Cucumis melo MELO3C009166.2 CTD small phosphatase-like protein chr04 - View
Corchorus olitorius COL.COLO4_25730 NLI interacting factor AWUE01019121.1 - View
Carica papaya Cpa.g.sc19.171 supercontig_19 + View
Chenopodium quinoa AUR62022887 CTDSP1: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 C_Quinoa_Scaffold_3378 - View
Chenopodium quinoa AUR62012254 Dd: CTD nuclear envelope phosphatase 1 homolog C_Quinoa_Scaffold_1995 - View
Capsella rubella Carub.0005s2270 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN scaffold_5 - View
Capsella rubella Carub.0004s2231 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN scaffold_4 - View
Cucumis sativus L. CsaV3_5G010150 CTD small phosphatase-like protein chr5 - View
Cucumis sativus L. CsaV3_3G033770 CTD small phosphatase-like protein chr3 + View
Daucus carota DCAR_011813 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv10620 GWHABJS00000009 - View
Davidia involucrata Dinv23116 GWHABJS00000015 - View
Davidia involucrata Dinv17997 GWHABJS00000004 - View
Durio zibethinus Duzib128G1642 NW_019168481.1 + View
Durio zibethinus Duzib114G0056 NW_019167926.1 + View
Erigeron canadensis ECA238G4437 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.G03062 Chr07 - View
Erythranthe guttata Migut.F00685 scaffold_6 - View
Eutrema salsugineum Thhalv10016941m.g PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN scaffold_10 - View
Eutrema salsugineum Thhalv10006119m.g PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN scaffold_19 + View
Fragaria x ananassa FAN03G3333 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Fvb7-3 + View
Fragaria x ananassa FAN01G2696 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Fvb7-4 + View
Fragaria x ananassa FAN09G4810 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Fvb6-2 - View
Fragaria x ananassa FAN10G2867 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Fvb7-1 + View
Fragaria vesca FvH4_7g24520 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Fvb7 - View
Fragaria vesca FvH4_6g11400 PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Fvb6 + View
Gossypium hirsutum Gohir.A13G015100 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN A13 + View
Gossypium hirsutum Gohir.A10G236800 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN A10 - View
Gossypium hirsutum Gohir.D13G016300 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN D13 + View
Gossypium hirsutum Gohir.D10G248600 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN D10 - View
Glycine max Glyma.14G059000 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Gm14 + View
Glycine max Glyma.02G257400 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Gm02 - View
Gossypium raimondii Gorai.011G288400 Chr11 - View
Gossypium raimondii Gorai.013G018000 Chr13 + View
Helianthus annuus HanXRQChr14g0459711 Probable haloacid dehalogenase-like hydrolase (HAD) superfamily protein HanXRQChr14 + View
Lupinus albus Lalb_Chr10g0105161 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Lalb_Chr10 - View
Lupinus albus Lalb_Chr23g0276921 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Lalb_Chr23 - View
Lupinus albus Lalb_Chr04g0250581 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Lalb_Chr04 + View
Lotus japonicus Lj6g0014618 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) chr6 + View
Lotus japonicus LjContig00357g0025174 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Contig00357 + View
Lonicera japonica Lj1C956G3 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_2_123481 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_8_11900 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) Lsat_1_v8_lg_8 + View
Malus domestica MD12G1166900 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Chr12 - View
Malus domestica MD07G1222200 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Chr07 - View
Malus domestica MD04G1153700 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Chr04 - View
Malus domestica MD01G1153200 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Chr01 - View
Manihot esculenta Manes.07G129900 Chromosome07 - View
Manihot esculenta Manes.10G012000 Chromosome10 + View
Medicago truncatula Medtr5g082660 NLI interacting factor-like phosphatase chr5 - View
Nelumbo nucifera Nn2g13135 chr2 - View
Nicotiana tabacum Nitab4.5_0000666g0050 HAD-like domain, NLI interacting factor, Dullard phosphatase domain, eukaryotic Nitab4.5_0000666 + View
Oryza sativa ssp. japonica Os05g0466800 Similar to CTD small phosphatase-like protein. chr05 + View
Petunia axillaris Peaxi162Scf00825g00310 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Peaxi162Scf00825 - View
Punica granatum PGR142G3167 NC_045128.1 - View
Prunus persica Prupe.6G277800 PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Pp06 - View
Prunus persica Prupe.2G250400 PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Pp02 - View
Pisum sativum Psat5g128200 NLI interacting factor-like phosphatase chr5LG3 - View
Papaver somniferum PSO339G4648 NC_039366.1 + View
Papaver somniferum PSO801G0554 NW_020628818.1 + View
Papaver somniferum PSO384G2552 NC_039368.1 - View
Populus trichocarpa Potri.016G116700 PTHR12210//PTHR12210:SF68 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED Chr16 - View
Populus trichocarpa Potri.008G068800 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Chr08 - View
Populus trichocarpa Potri.010G188500 PTHR12210//PTHR12210:SF57 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Chr10 + View
Phaseolus vulgaris Phvul.008G223800 PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Chr08 + View
Quercus lobata QL08p063235 8 - View
Quercus lobata QL07p035621 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0463021 RcHm_v2.0_Chr3 + View
Rosa chinensis RcHm_v2.0_Chr1g0370271 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0177400 chr09 - View
Striga asiatica SGA_v2.0_scaffold60G21004 scaffold60 - View
Salvia bowleyana SalBow6G6375 GWHASIU00000002 - View
Salix brachista Sabra10G0145200 GWHAAZH00000010 + View
Salix brachista Sabra08G0050500 GWHAAZH00000008 - View
Simmondsia chinensis Sc10g0002380 GWHAASQ00000010 - View
Sechium edule Sed0024785 LG04 + View
Sechium edule Sed0024436 LG07 - View
Sechium edule Sed0008999 LG04 - View
Solanum lycopersicum Solyc06g051520.3 CTD small phosphatase-like protein (AHRD V3.3 *** A0A1J3JJA1_NOCCA) SL4.0ch06 + View
Solanum lycopersicum Solyc05g052580.3 CTD small phosphatase-like protein (AHRD V3.3 *** A0A1J3CDK2_NOCCA) SL4.0ch05 + View
Schrenkiella parvula Sp4g22460 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) ch4-6 - View
Schrenkiella parvula Sp5g06570 K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP) ch5-1 + View
Solanum pennellii Sopen06g017490 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | FUNCTIONS IN: phosphatase activity | INVOLVED IN: biological_process unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain , NLI interacting factor | BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen05g031110 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | FUNCTIONS IN: phosphatase activity | INVOLVED IN: biological_process unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain , NLI interacting factor | BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400027123 NLI interacting factor family protein ST4.03ch05 + View
Selenicereus undatus Hund15929 Scaffold_33677 + View
Trochodendron aralioides TAR623G0105 group7 - View
Trochodendron aralioides TAR636G2849 group1 + View
Trochodendron aralioides TAR633G0423 group2 - View
Theobroma cacao Thecc.10G015800 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Chromosome_10 + View
Tarenaya hassleriana THA.LOC104810101 CTD small phosphatase-like protein NW_010965122.1 - View
Tarenaya hassleriana THA.LOC104810642 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 NW_010960187.1 - View
Trifolium pratense TPR.G11212 Tp57577_TGAC_v2_LG7 - View
Trifolium pratense TPR.G38373 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI73G0476 NC_052232.1 - View
Tripterygium wilfordii TWI74G0235 NC_052234.1 + View
Tripterygium wilfordii TWI09G0042 NC_052245.1 + View
Vaccinium macrocarpon vmacro10040 Similar to ctdspl2: CTD small phosphatase-like protein 2 (Dictyostelium discoideum OX%3D44689) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G2393 CM024073.1 - View
Vitis vinifera GSVIVG01011158001 chr8 - View
Vitis vinifera GSVIVG01032815001 chr13 - View