Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G8860 LG-11 - View
Acer truncatum Atru.chr4.2783 chr4 - View
Acer truncatum Atru.chr2.646 chr2 - View
Avicennia marina MSTRG.24784 ScioBoG_4088_HRSCAF_4107 - View
Aquilegia oxysepala Aqoxy2G03194 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SH1YAP PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT5G27110 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G05240 mitochondrial editing factor 19 Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. mitochondrial editing factor 19 (MEF19)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: SLOW GROWTH 1 (TAIR:AT2G22410.1)%3B Has 38600 Blast hits to 13827 proteins in 232 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 58%3B Fungi - 134%3B Plants - 37910%3B Viruses - 0%3B Other Eukaryotes - 488 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaNung04265 Contig1455 - View
Brassica napus C07p40490 C07 - View
Brassica napus A06p37740 A06 + View
Brassica oleracea BolC7t44584H C7 - View
Brassica rapa BraA06t26693Z A06 + View
Beta vulgaris EL10Ac4g09224 PF01535 - PPR repeat (PPR) Chr4_EL10_PGA_scaffold1 - View
Cicer arietinum L. Ca_21538_v3 Ca_LG7_v3 - View
Corylus avellana Haze_04361 Similar to PCMP-E93: Pentatricopeptide repeat-containing protein At3g18970 (Arabidopsis thaliana OX%3D3702) 2 + View
Citrus clementina Ciclev10003904m.g scaffold_5 - View
Carpinus fangiana Cfa006492 Cfa02 + View
Cardamine hirsuta CARHR153890 Pentatricopeptide repeat-containing protein Chr5 + View
Cardamine hirsuta CARHR185760 Pentatricopeptide repeat-containing protein Chr6 - View
Carya illinoinensis CiPaw.07G009600 PF01535 - PPR repeat (PPR) Chr07 + View
Citrullus lanatus ClCG03G016410 Pentatricopeptide repeat-containing protein CG_Chr03 + View
Citrullus lanatus ClCG06G005260 Pentatricopeptide repeat-containing family protein CG_Chr06 + View
Cucumis melo MELO3C029311.2 Pentatricopeptide repeat-containing protein chr02 - View
Chenopodium quinoa AUR62000826 PCMP-E83: Pentatricopeptide repeat-containing protein At3g05340 C_Quinoa_Scaffold_2088 + View
Capsella rubella Carub.0006s2539 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_6 + View
Cucumis sativus L. CsaV3_1G039540 Pentatricopeptide repeat-containing protein chr1 - View
Davidia involucrata Dinv04269 GWHABJS00000005 - View
Durio zibethinus Duzib177G0781 NW_019168004.1 + View
Durio zibethinus Duzib151G1185 NW_019167904.1 - View
Durio zibethinus Duzib177G1006 NW_019168004.1 - View
Eucalyptus grandis Eucgr.B01284 Chr02 - View
Eucalyptus grandis Eucgr.H03713 Chr08 - View
Eucalyptus grandis Eucgr.B01754 Chr02 - View
Erythranthe guttata Migut.N00112 scaffold_14 + View
Eutrema salsugineum Thhalv10005537m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_6 + View
Fragaria x ananassa FAN09G4877 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-2 - View
Fragaria x ananassa FAN05G5794 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-3 + View
Fragaria x ananassa FAN09G3938 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-2 - View
Fragaria x ananassa FAN14G2312 Fvb6-1 + View
Fragaria x ananassa FAN14G4234 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 - View
Fragaria x ananassa FAN05G0289 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-3 - View
Gossypium hirsutum Gohir.A11G240200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) A11 - View
Gossypium hirsutum Gohir.D11G261900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D11 - View
Gossypium hirsutum Gohir.A11G258500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A11 - View
Gossypium hirsutum Gohir.D11G268600 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D11 - View
Gossypium hirsutum Gohir.A11G251500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A11 - View
Gossypium hirsutum Gohir.A10G102400 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) A10 + View
Gossypium raimondii Gorai.007G280600 Chr07 - View
Gossypium raimondii Gorai.007G288400 Chr07 - View
Lupinus albus Lalb_Chr21g0310901 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr21 + View
Lupinus albus Lalb_Chr13g0303731 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr13 + View
Malus domestica MD04G1216800 Pentatricopeptide repeat (PPR) superfamily protein Chr04 - View
Nelumbo nucifera Nn1g02350 chr1 + View
Punica granatum PGR083G0153 NC_045133.1 - View
Prunus persica Prupe.6G336500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp06 - View
Phaseolus vulgaris Phvul.006G162500 Chr06 + View
Quercus lobata QL03p023809 3 - View
Rhododendron simsii Rhsim01G0282900 chr01 + View
Simmondsia chinensis Sc13g0003520 GWHAASQ00000013 + View
Simmondsia chinensis Sc20g0000560 GWHAASQ00000020 - View
Sechium edule Sed0023497 LG04 + View
Sechium edule Sed0003071 LG11 - View
Solanum lycopersicum Solyc01g098150.3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2YZ45_CAPAN) SL4.0ch01 - View
Schrenkiella parvula Sp2g20390 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch2-4 - View
Solanum pennellii Sopen01g041720 Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality. | EMBRYO DEFECTIVE 175 (EMB175) | FUNCTIONS IN: catalytic activity | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: chloroplast, membrane | EXPRESSED IN: root, flower, leaf | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch01 - View
Solanum pennellii Sopen01g032600 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch01 - View
Selenicereus undatus Hund07006 Scaffold_33676 + View
Trochodendron aralioides TAR636G3029 group1 - View
Trochodendron aralioides TAR365G0450 group16 + View
Tarenaya hassleriana THA.LOC104805819 pentatricopeptide repeat-containing protein At3g18970 NW_010961290.1 - View
Tripterygium wilfordii TWI59G1336 NC_052248.1 + View