Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G9550 LG-9 + View
Arabidopsis lyrata AL6G48450 scaffold_6 - View
Amaranthus hybridus Ah.14g088300 AmaHy_arrow1_Scaffold_14 - View
Arabidopsis thaliana AT4G04940 transducin family protein / WD-40 repeat family protein transducin family protein / WD-40 repeat family protein%3B FUNCTIONS IN: nucleotide binding%3B INVOLVED IN: rRNA processing%3B LOCATED IN: CUL4 RING ubiquitin ligase complex%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C Small-subunit processome%2C Utp21 (InterPro:IPR007319)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Beta vulgaris EL10Ac8g19912 PTHR11439//PTHR11439:SF193 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Chr8_EL10_PGA_scaffold4 - View
Capsicum annuum CAN.G569.57 PGAv.1.6.scaffold569 - View
Cicer arietinum L. Ca_18448_v3 Ca_LG6_v3 + View
Cardamine hirsuta CARHR252600 WD-repeat protein, putative Chr8 + View
Carica papaya Cpa.g.sc34.27 supercontig_34 + View
Chenopodium quinoa AUR62012623 AtMg00810: Uncharacterized mitochondrial protein AtMg00810 C_Quinoa_Scaffold_2715 - View
Capsella rubella Carub.0006s3286 K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36) scaffold_6 - View
Erigeron canadensis ECA248G2683 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA248G0546 Conyza_canadensis_scaffold:9 + View
Eutrema salsugineum Thhalv10028405m.g K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36) scaffold_3 + View
Helianthus annuus HanXRQChr05g0130761 Putative gag-polypeptide of LTR copia-type HanXRQChr05 - View
Manihot esculenta Manes.16G017966 Chromosome16 - View
Medicago truncatula Medtr2g088970 hypothetical protein chr2 - View
Nelumbo nucifera Nn1g03750 chr1 + View
Nelumbo nucifera Nn1g06847 chr1 - View
Oryza sativa ssp. japonica Os04g0629600 Similar to Transposase of Tn10 [Oryza sativa (japonica cultivar-group)]. Conserved hypothetical protein. chr04 + View
Prunus persica Prupe.4G199600 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Pp04 - View
Rhododendron simsii Rhsim13G0162800 chr13 + View
Salix brachista Sabra11G0019800 GWHAAZH00000011 + View
Solanum lycopersicum Solyc03g031487.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A2K3PAJ3_TRIPR) SL4.0ch03 + View
Schrenkiella parvula Sp6g04020 K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36) ch6-1 + View
Solanum pennellii Sopen00g005160 hypothetical protein Spenn-ch00 - View
Solanum pennellii Sopen00g004450 hypothetical protein Spenn-ch00 + View
Tripterygium wilfordii TWI38G0151 NC_052252.1 - View
Vaccinium macrocarpon vmacro03720 Similar to CRK10: Cysteine-rich receptor-like protein kinase 10 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G1538 CM024079.1 - View
Vigna mungo VMungo1127G0188 CM024076.1 - View
Vigna mungo VMungo1215G3020 CM024074.1 - View