Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001363 PREDICTED: pentatricopeptide repeat-containing protein At4g30700 [Vitis vinifera] Chr2 - View
CSS0047081 PREDICTED: pentatricopeptide repeat-containing protein At1g74630 [Vitis vinifera] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.191 chr8 - View
Acer truncatum Atru.chr10.1412 chr10 - View
Actinidia chinensis Actinidia16747 Lachesis_group12 + View
Actinidia chinensis Actinidia19485 Lachesis_group2 + View
Aquilegia oxysepala Aqoxy1G01939 CHR01 - View
Arabidopsis thaliana AT1G29710 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G34370.1)%3B Has 17079 Blast hits to 9820 proteins in 144 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 7%3B Fungi - 4%3B Plants - 16965%3B Viruses - 0%3B Other Eukaryotes - 103 (source: NCBI BLink). Chr1 + View
Brassica oleracea BolC7t43519H C7 + View
Beta vulgaris EL10Ac8g19884 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr8_EL10_PGA_scaffold4 + View
Capsicum annuum CAN.G257.53 PGAv.1.6.scaffold257 - View
Cicer arietinum L. Ca_14217_v3 Ca_LG5_v3 - View
Corylus avellana Haze_13507 Similar to PCMP-E75: Pentatricopeptide repeat-containing protein At2g42920, chloroplastic (Arabidopsis thaliana OX%3D3702) 5 + View
Citrus clementina Ciclev10018369m.g scaffold_2 + View
Carpinus fangiana Cfa001034 Cfa01 - View
Cardamine hirsuta CARHR175220 Pentatricopeptide repeat-containing protein Chr6 - View
Carya illinoinensis CiPaw.09G138000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 - View
Carica papaya Cpa.g.sc17.169 supercontig_17 - View
Capsella rubella Carub.0008s0145 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_8 - View
Cucumis sativus L. CsaV3_6G051350 pentatricopeptide repeat-containing protein At5g46460, mitochondrial chr6 + View
Erigeron canadensis ECA248G2899 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA234G4501 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.E02385 Chr05 - View
Fragaria x ananassa FAN02G3802 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb6-4 + View
Helianthus annuus HanXRQChr05g0148081 Putative pentatricopeptide repeat HanXRQChr05 - View
Magnolia biondii MBI10_g44969_MAGBIO AED:0.10 Chr10 - View
Malus domestica MD05G1289700 Pentatricopeptide repeat (PPR) superfamily protein Chr05 + View
Manihot esculenta Manes.17G064600 Chromosome17 + View
Manihot esculenta Manes.17G073400 Chromosome17 - View
Nelumbo nucifera Nn4g26454 chr4 + View
Punica granatum PGR042G0087 NC_045130.1 + View
Prunus persica Prupe.4G073400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp04 + View
Rosa chinensis RcHm_v2.0_Chr5g0012881 RcHm_v2.0_Chr5 - View
Rosa chinensis RcHm_v2.0_Chr2g0151611 RcHm_v2.0_Chr2 + View
Salvia bowleyana SalBow7G4557 GWHASIU00000005 + View
Sechium edule Sed0018442 LG01 - View
Sequoiadendron giganteum SEGI_15536 chr6 - View
Sapria himalayana SHI00957 scaffold1_25991295 + View
Solanum pennellii Sopen02g020360 Pentatricopeptide repeat (PPR) superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400003087 Pentatricopeptide repeat-containing protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400018731 Pentatricopeptide repeat-containing protein, chloroplastic ST4.03ch11 - View
Tripterygium wilfordii TWI09G0771 NC_052245.1 + View
Vigna mungo VMungo0540G1868 CM024075.1 + View
Vitis vinifera GSVIVG01021374001 chr10 + View