Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G290 LG-9 + View
Aethionema arabicum Aa31LG6G7040 LG-6 - View
Acer truncatum Atru.chr9.2012 chr9 + View
Actinidia chinensis Actinidia22148 Lachesis_group23 + View
Actinidia chinensis Actinidia27326 Lachesis_group14 - View
Actinidia chinensis Actinidia22727 Lachesis_group20 - View
Arabidopsis lyrata AL7G29530 scaffold_7 + View
Arabidopsis lyrata AL7G47360 scaffold_7 + View
Avicennia marina MSTRG.1810 ScioBoG_102834_HRSCAF_103055 + View
Avicennia marina MSTRG.25664 ScioBoG_4119_HRSCAF_4138 - View
Amaranthus hybridus Ah.12g052470 Probable polygalacturonase (PG) (EC 3.2.1.15) (Pectinase) AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy5G04192 CHR05 - View
Arabidopsis thaliana AT4G23820 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Pectin lyase fold (InterPro:IPR012334)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G41870.1)%3B Has 4183 Blast hits to 4168 proteins in 506 species: Archae - 6%3B Bacteria - 1472%3B Metazoa - 14%3B Fungi - 1146%3B Plants - 1414%3B Viruses - 0%3B Other Eukaryotes - 131 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT5G41870 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Pectin lyase fold (InterPro:IPR012334)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G23820.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaNung01090 Contig456 - View
Brassica carinata BcaC09g50943 ChrC09 + View
Brassica carinata BcaC08g44562 ChrC08 - View
Brassica napus C01p19040 C01 - View
Brassica napus C06p20290 C06 - View
Brassica napus C07p53140 C07 - View
Brassica napus A03p54780 A03 - View
Brassica napus A01p15140 A01 - View
Brassica oleracea BolC6t37209H C6 - View
Brassica oleracea BolC1t01830H C1 - View
Brassica oleracea BolC7t45810H C7 - View
Brassica rapa BraA03t14545Z A03 - View
Brassica rapa BraA01t01452Z A01 - View
Beta vulgaris EL10Ac5g12904 PTHR31339//PTHR31339:SF3 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G532.110 PGAv.1.6.scaffold532 - View
Cannabis sativa CANSAT21G2051 NC_044374.1 - View
Corylus avellana Haze_08624 Similar to GSVIVT00026920001: Probable polygalacturonase (Vitis vinifera OX%3D29760) 4 + View
Coffea canephora Cc08_g15950 Probable polygalacturonase chr8 - View
Citrus clementina Ciclev10020162m.g scaffold_3 + View
Ceratophyllum demersum CDE10G1076 8 + View
Ceratophyllum demersum CDE10G0266 8 + View
Carpinus fangiana Cfa023586 scaffold14 + View
Cardamine hirsuta CARHR231210 Pectin lyase-like superfamily protein Chr7 - View
Carya illinoinensis CiPaw.12G084100 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Chr12 + View
Carya illinoinensis CiPaw.11G122500 PTHR31339//PTHR31339:SF3 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Chr11 + View
Citrullus lanatus ClCG01G001940 Pectin lyase-like superfamily protein LENGTH=444 CG_Chr01 + View
Cucumis melo MELO3C005746.2 Pectin lyase-like superfamily protein chr09 - View
Corchorus olitorius COL.COLO4_10684 Glycoside hydrolase%2C family 28 AWUE01014570.1 - View
Chenopodium quinoa AUR62019827 GSVIVT00026920001: Probable polygalacturonase C_Quinoa_Scaffold_1480 - View
Chenopodium quinoa AUR62010828 GSVIVT00026920001: Probable polygalacturonase C_Quinoa_Scaffold_1280 - View
Capsella rubella Carub.0007s3349 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN scaffold_7 + View
Cucumis sativus L. CsaV3_5G002080 Pectin lyase-like superfamily protein chr5 + View
Daucus carota DCAR_005038 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_029882 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv38841 GWHABJS00000003 + View
Davidia involucrata Dinv37540 GWHABJS00000017 + View
Durio zibethinus Duzib068G0237 NW_019167838.1 - View
Durio zibethinus Duzib084G1127 NW_019167827.1 - View
Durio zibethinus Duzib205G0647 NW_019168381.1 - View
Erigeron canadensis ECA233G4888 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA246G2446 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.D01730 Chr04 - View
Eucalyptus grandis Eucgr.E00853 Chr05 - View
Erythranthe guttata Migut.E01247 scaffold_5 - View
Erythranthe guttata Migut.A00665 scaffold_1 + View
Eutrema salsugineum Thhalv10025189m.g PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN scaffold_1 + View
Eutrema salsugineum Thhalv10027765m.g PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN scaffold_14 + View
Fragaria x ananassa FAN04G2103 PTHR31339//PTHR31339:SF3 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Fvb5-4 - View
Fragaria x ananassa FAN08G3061 PTHR31339//PTHR31339:SF3 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Fvb5-3 + View
Fragaria x ananassa FAN18G0848 PTHR31339//PTHR31339:SF3 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Fvb5-1 + View
Fragaria x ananassa FAN13G1496 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Fvb5-2 - View
Fragaria x ananassa FAN18G3109 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Fvb5-1 - View
Fragaria vesca FvH4_5g04440 PTHR31339//PTHR31339:SF3 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Fvb5 - View
Gossypium hirsutum Gohir.A08G097200 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A08 - View
Gossypium hirsutum Gohir.D08G131100 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN D08 + View
Gossypium raimondii Gorai.004G134000 Chr04 + View
Helianthus annuus HanXRQChr17g0535211 Putative glycoside hydrolase, family 28; Pectin lyase fold/virulence factor HanXRQChr17 - View
Lonicera japonica Lj8C209T7 GWHAAZE00000008 + View
Lonicera japonica Lj2A169G37 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_12221 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_3_10401 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI06_g05043_MAGBIO AED:0.07 Chr06 - View
Magnolia biondii MBI07_g27259_MAGBIO AED:0.14 Chr07 - View
Malus domestica MD14G1127400 Pectin lyase-like superfamily protein Chr14 - View
Malus domestica MD06G1105300 Pectin lyase-like superfamily protein Chr06 - View
Manihot esculenta Manes.02G010900 Chromosome02 + View
Manihot esculenta Manes.01G049616 Chromosome01 + View
Nelumbo nucifera Nn3g19040 chr3 + View
Nicotiana tabacum Nitab4.5_0000223g0370 Pectin lyase fold, Pectin lyase fold/virulence factor, Parallel beta-helix repeat, Glycoside hydrolase, family 28 Nitab4.5_0000223 - View
Olea europaea Oeu063531.1 chr4 + View
Olea europaea Oeu038570.1 chr11 - View
Petunia axillaris Peaxi162Scf00074g01024 Pectin lyase-like superfamily protein Peaxi162Scf00074 + View
Punica granatum PGR031G0947 NC_045127.1 + View
Punica granatum PGR042G0615 NC_045130.1 + View
Prunus persica Prupe.5G117600 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Pp05 - View
Populus trichocarpa Potri.003G139100 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Chr03 - View
Quercus lobata QL02p030888 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr7g0195091 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim07G0082900 chr07 + View
Rhododendron simsii Rhsim02G0242200 chr02 - View
Striga asiatica SGA_v2.0_scaffold111G31417 scaffold111 + View
Salvia bowleyana SalBow1G8449 GWHASIU00000001 - View
Salvia bowleyana SalBow8G1916 GWHASIU00000004 + View
Salix brachista Sabra03G0100200 GWHAAZH00000003 - View
Simmondsia chinensis Sc01g0010240 GWHAASQ00000001 - View
Sechium edule Sed0008496 LG05 + View
Sechium edule Sed0022933 LG01 + View
Solanum lycopersicum Solyc08g082170.4 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LXC7_ARTAN) SL4.0ch08 - View
Schrenkiella parvula Sp7g00240 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN ch7-1 + View
Schrenkiella parvula Sp7g21780 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN ch7-4 - View
Solanum pennellii Sopen08g030460 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400012156 Polygalacturonase ST4.03ch08 - View
Selenicereus undatus Hund14228 Scaffold_33677 + View
Selenicereus undatus Hund11395 Scaffold_10417 + View
Trochodendron aralioides TAR374G0470 group12 - View
Trochodendron aralioides TAR636G0375 group1 + View
Theobroma cacao Thecc.03G296300 Pectin lyase-like superfamily protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104809650 probable polygalacturonase NW_010965019.1 + View
Tarenaya hassleriana THA.LOC104814979 probable polygalacturonase isoform X1 NW_010960187.1 - View
Tripterygium wilfordii TWI81G0772 NC_052251.1 - View
Tripterygium wilfordii TWI60G1429 NC_052246.1 + View
Vaccinium macrocarpon vmacro11434 Protein of unknown function chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13902 Similar to GSVIVT00026920001: Probable polygalacturonase (Vitis vinifera OX%3D29760) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01019516001 chr2 - View