Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049415 PREDICTED: zinc finger CCCH domain-containing protein 6 [Vitis vinifera] Contig61 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G19250 LG-4 + View
Acer truncatum Atru.chr13.328 chr13 - View
Actinidia chinensis Actinidia15403 Lachesis_group26 - View
Actinidia chinensis Actinidia22990 Lachesis_group26 - View
Arabidopsis lyrata AL5G31600 scaffold_5 + View
Arabidopsis lyrata AL8G45250 scaffold_8 + View
Avicennia marina MSTRG.2700 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.1211 ScioBoG_102833_HRSCAF_103052 - View
Amaranthus hybridus Ah.02g124510 Zinc finger CCCH domain-containing protein 68 (AtC3H68) AmaHy_arrow1_Scaffold_2 - View
Aquilegia oxysepala Aqoxy6G02321 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0GB9DR arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9DZU8H PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0H5DHB PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT3G51180 Zinc finger C-x8-C-x5-C-x3-H type family protein Zinc finger C-x8-C-x5-C-x3-H type family protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G66270.1)%3B Has 424 Blast hits to 373 proteins in 113 species: Archae - 0%3B Bacteria - 48%3B Metazoa - 106%3B Fungi - 68%3B Plants - 146%3B Viruses - 3%3B Other Eukaryotes - 53 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G66270 Zinc finger C-x8-C-x5-C-x3-H type family protein Zinc finger C-x8-C-x5-C-x3-H type family protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: leaf%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G51180.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB01g00544 ChrB01 - View
Brassica napus A09p44220 A09 + View
Brassica napus C08p26460 C08 + View
Brassica oleracea BolC8t50261H C8 + View
Brassica rapa BraA09t39883Z A09 + View
Beta vulgaris EL10As8g23840 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Scaffold_0008 - View
Capsicum annuum CAN.G1671.1 PGAv.1.6.scaffold1671 + View
Corylus avellana Haze_22606 Similar to At1g19860: Zinc finger CCCH domain-containing protein 6 (Arabidopsis thaliana OX%3D3702) 3 + View
Corylus avellana Haze_03792 Similar to Os04g0663200: Zinc finger CCCH domain-containing protein 30 (Oryza sativa subsp. japonica OX%3D39947) 2 - View
Coffea canephora Cc07_g10590 Putative Zinc finger CCCH domain-containing protein 45 chr7 + View
Coffea canephora Cc10_g01940 Putative Zinc finger CCCH domain-containing protein 6 chr10 - View
Citrus clementina Ciclev10000970m.g scaffold_5 + View
Carpinus fangiana Cfa013922 Cfa05 + View
Carpinus fangiana Cfa006959 Cfa02 + View
Cardamine hirsuta CARHR281440 Zinc finger (CCCH-type) family protein Chr8 + View
Cardamine hirsuta CARHR160770 Zinc finger (CCCH-type) family protein Chr5 + View
Carya illinoinensis CiPaw.08G132900 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Chr08 - View
Carya illinoinensis CiPaw.08G064200 Chr08 + View
Cucumis melo MELO3C010998.2 zinc finger CCCH domain-containing protein 6 chr03 - View
Corchorus olitorius COL.COLO4_21931 hypothetical protein AWUE01017831.1 - View
Capsella rubella Carub.0008s2822 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED scaffold_8 + View
Capsella rubella Carub.0005s1757 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED scaffold_5 + View
Cucumis sativus L. CsaV3_6G046870 zinc finger CCCH domain-containing protein 6-like chr6 - View
Daucus carota DCAR_016617 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv40073 GWHABJS00000014 - View
Davidia involucrata Dinv33617 GWHABJS00000012 + View
Davidia involucrata Dinv39498 GWHABJS00000011 + View
Davidia involucrata Dinv31824 GWHABJS00000002 + View
Durio zibethinus Duzib187G1527 NW_019167860.1 + View
Durio zibethinus Duzib147G0092 NW_019168470.1 + View
Durio zibethinus Duzib116G0954 NW_019167949.1 - View
Durio zibethinus Duzib041G0763 NW_019167826.1 - View
Durio zibethinus Duzib093G1695 NW_019167937.1 + View
Eucalyptus grandis Eucgr.F01630 Chr06 + View
Eucalyptus grandis Eucgr.I02362 Chr09 - View
Erythranthe guttata Migut.C00819 scaffold_3 - View
Erythranthe guttata Migut.N03144 scaffold_14 + View
Eutrema salsugineum Thhalv10004167m.g PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED scaffold_6 + View
Eutrema salsugineum Thhalv10010301m.g PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED scaffold_16 - View
Fragaria x ananassa FAN28G1861 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Fvb1-1 + View
Fragaria x ananassa FAN26G0229 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Fvb1-2 - View
Fragaria x ananassa FAN19G0904 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Fvb1-4 - View
Fragaria x ananassa FAN27G1307 PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Fvb2-1 - View
Fragaria vesca FvH4_2g38810 PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Fvb2 - View
Fragaria vesca FvH4_1g11990 PTHR33400//PTHR33400:SF2 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Fvb1 - View
Gossypium hirsutum Gohir.A11G176500 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED A11 - View
Gossypium hirsutum Gohir.D06G001300 D06 - View
Gossypium hirsutum Gohir.D01G099400 D01 - View
Gossypium hirsutum Gohir.A01G112600 A01 - View
Gossypium hirsutum Gohir.D11G184300 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED D11 - View
Gossypium hirsutum Gohir.A06G005500 A06 - View
Glycine max Glyma.06G025700 Gm06 - View
Glycine max Glyma.04G025900 Gm04 - View
Glycine max Glyma.11G075800 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Gm11 + View
Glycine max Glyma.01G167400 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Gm01 + View
Glycine max Glyma.02G049600 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Gm02 - View
Gossypium raimondii Gorai.010G005700 Chr10 - View
Gossypium raimondii Gorai.007G196000 Chr07 - View
Gossypium raimondii Gorai.002G124700 Chr02 - View
Lupinus albus Lalb_Chr11g0062001 Lalb_Chr11 - View
Lupinus albus Lalb_Chr09g0321841 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Lalb_Chr09 - View
Lotus japonicus Lj2g0018127 PTHR33400//PTHR33400:SF2 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED chr2 + View
Lotus japonicus Lj4g0013046 PTHR33400//PTHR33400:SF2 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED chr4 - View
Lotus japonicus Lj1g0005660 chr1 - View
Lonicera japonica Lj4C217G5 GWHAAZE00000004 + View
Magnolia biondii MBI05_g26506_MAGBIO AED:0.17 Chr05 + View
Malus domestica MD15G1247000 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr15 - View
Malus domestica MD15G1014600 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr15 - View
Malus domestica MD08G1015700 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr08 - View
Malus domestica MD02G1134000 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr02 - View
Manihot esculenta Manes.02G102900 Chromosome02 + View
Medicago truncatula Medtr8g076080 zinc finger (CCCH-type) family protein, putative chr8 - View
Nelumbo nucifera Nn5g29271 chr5 + View
Nelumbo nucifera Nn6g32298 chr6 + View
Nicotiana tabacum Nitab4.5_0004254g0010 Zinc finger, CCCH-type Nitab4.5_0004254 + View
Nicotiana tabacum Nitab4.5_0005721g0090 Zinc finger, CCCH-type Nitab4.5_0005721 - View
Olea europaea Oeu046254.1 chr10 - View
Olea europaea Oeu048454.1 chr10 - View
Punica granatum PGR083G2521 NC_045133.1 - View
Punica granatum PGR119G1008 NC_045132.1 - View
Prunus persica Prupe.7G166800 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Pp07 + View
Prunus persica Prupe.1G368900 Pp01 - View
Pisum sativum Psat4g098440 Zinc finger C-x8-C-x5-C-x3-H type (and similar) chr4LG4 + View
Papaver somniferum PSO675G8906 NC_039358.1 + View
Populus trichocarpa Potri.005G236300 Chr05 + View
Populus trichocarpa Potri.002G025100 Chr02 - View
Populus trichocarpa Potri.005G115901 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Chr05 - View
Populus trichocarpa Potri.007G013600 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Chr07 - View
Phaseolus vulgaris Phvul.003G260700 Chr03 + View
Phaseolus vulgaris Phvul.009G015300 Chr09 + View
Phaseolus vulgaris Phvul.002G110100 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED Chr02 - View
Quercus lobata QL02p010998 CM012294 + View
Quercus lobata QL06p033603 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0302461 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr2g0099611 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim06G0023800 chr06 - View
Rhododendron simsii Rhsim10G0213400 chr10 - View
Striga asiatica SGA_v2.0_scaffold92G28266 scaffold92 - View
Salvia bowleyana SalBow7G4492 GWHASIU00000005 + View
Salvia bowleyana SalBow3G4187 GWHASIU00000006 + View
Salix brachista Sabra07G0010500 GWHAAZH00000007 - View
Salix brachista Sabra05G0095000 GWHAAZH00000005 - View
Salix brachista Sabra05G0182700 GWHAAZH00000005 + View
Sechium edule Sed0009314 LG10 - View
Sechium edule Sed0026959 LG11 + View
Sechium edule Sed0014337 LG14 - View
Sapria himalayana SHI08568 scaffold7_18583372 - View
Solanum lycopersicum Solyc02g084200.3 Zinc finger transcription factor 19 SL4.0ch02 - View
Schrenkiella parvula Sp5g11040 PTHR33400:SF2 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED ch5-1 - View
Schrenkiella parvula Sp2g30310 PTHR33400//PTHR33400:SF2 - FAMILY NOT NAMED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED ch2-4 - View
Solanum pennellii Sopen02g028940 hypothetical protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400003556 Zinc finger CCCH domain-containing protein 6 ST4.03ch02 - View
Trochodendron aralioides TAR625G0420 group4 - View
Trochodendron aralioides TAR381G0737 group11 - View
Theobroma cacao Thecc.08G040800 Zinc finger C-x8-C-x5-C-x3-H type family protein Chromosome_8 + View
Theobroma cacao Thecc.01G021000 Zinc finger C-x8-C-x5-C-x3-H type family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104819181 zinc finger CCCH domain-containing protein 45 NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104811391 zinc finger CCCH domain-containing protein 6 NW_010965372.1 - View
Trifolium pratense TPR.G30055 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI53G0820 NC_052244.1 - View
Vaccinium macrocarpon vmacro21915 Similar to At1g19860: Zinc finger CCCH domain-containing protein 6 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro21710 Similar to At1g19860: Zinc finger CCCH domain-containing protein 6 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0824 CM024072.1 + View
Vigna mungo VMungo1215G0370 CM024074.1 + View
Vigna mungo VMungo0251G2011 CM024069.1 + View
Vitis vinifera GSVIVG01009860001 chr18 + View
Vitis vinifera GSVIVG01018802001 chr4 + View