Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0048739 hypothetical protein POPTR_0007s05910g [Populus trichocarpa] Chr2 + View
CSS0036236 PREDICTED: laccase-14 [Vitis vinifera] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.1901 chr13 - View
Acer truncatum Atru.chr4.237 chr4 - View
Actinidia chinensis Actinidia10282 Lachesis_group26 + View
Actinidia chinensis Actinidia15625 Lachesis_group28 + View
Arabidopsis lyrata AL7G12060 scaffold_7 + View
Avicennia marina MSTRG.22126 ScioBoG_3008_HRSCAF_3015 - View
Avicennia marina MSTRG.24482 ScioBoG_4088_HRSCAF_4107 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WQU9DI PTHR11709//PTHR11709:SF94 - MULTI-COPPER OXIDASE // LACCASE-15 arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0TP0XX PTHR11709//PTHR11709:SF94 - MULTI-COPPER OXIDASE // LACCASE-15 arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT4G39830 Cupredoxin superfamily protein Cupredoxin superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C L-ascorbate oxidase activity%2C copper ion binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: endomembrane system%2C extracellular region%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Multicopper oxidase%2C type 3 (InterPro:IPR011707)%2C Multicopper oxidase%2C type 2 (InterPro:IPR011706)%2C Cupredoxin (InterPro:IPR008972)%2C Multicopper oxidase%2C copper-binding site (InterPro:IPR002355)%2C Multicopper oxidase%2C type 1 (InterPro:IPR001117)%2C L-ascorbate oxidase%2C plants (InterPro:IPR017760)%3B BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase (TAIR:AT5G21100.1)%3B Has 10346 Blast hits to 8779 proteins in 1558 species: Archae - 67%3B Bacteria - 4905%3B Metazoa - 456%3B Fungi - 3230%3B Plants - 1293%3B Viruses - 0%3B Other Eukaryotes - 395 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0564G417 AmTr_v1.0_scaffold00010 + View
Beta vulgaris EL10Ac6g15069 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Chr6_EL10_PGA_scaffold0 - View
Cicer arietinum L. Ca_17714_v3 Ca_LG6_v3 - View
Corylus avellana Haze_24979 Similar to L-ascorbate oxidase (Cucumis sativus OX%3D3659) 8 - View
Coffea canephora Cc10_g06200 Laccase-15 chr10 + View
Citrus clementina Ciclev10025235m.g scaffold_7 - View
Citrus clementina Ciclev10003795m.g scaffold_5 - View
Ceratophyllum demersum CDE10G0621 8 - View
Ceratophyllum demersum CDE10G0296 8 - View
Carpinus fangiana Cfa018228 Cfa07 + View
Cardamine hirsuta CARHR246870 Laccase, putative Chr7 - View
Carya illinoinensis CiPaw.03G138600 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Chr03 - View
Carya illinoinensis CiPaw.15G007600 PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Chr15 + View
Capsella rubella Carub.0007s0175 PTHR11709//PTHR11709:SF28 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED scaffold_7 + View
Davidia involucrata Dinv16314 GWHABJS00000014 + View
Davidia involucrata Dinv21940 GWHABJS00000021 + View
Davidia involucrata Dinv17707 GWHABJS00000002 - View
Durio zibethinus Duzib052G0077 NW_019167849.1 - View
Durio zibethinus Duzib116G0624 NW_019167949.1 - View
Erigeron canadensis ECA247G2963 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.F02641 Chr06 + View
Erythranthe guttata Migut.N02928 scaffold_14 + View
Erythranthe guttata Migut.L00102 scaffold_12 - View
Fragaria x ananassa FAN27G0717 PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Fvb2-1 - View
Fragaria x ananassa FAN23G0706 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Fvb1-3 + View
Fragaria vesca FvH4_1g21540 PTHR11709//PTHR11709:SF122 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Fvb1 + View
Fragaria vesca FvH4_2g12570 K05909 - laccase (E1.10.3.2) Fvb2 + View
Gossypium hirsutum Gohir.D06G114000 PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED D06 + View
Gossypium hirsutum Gohir.A06G109600 PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED A06 + View
Gossypium hirsutum Gohir.A05G247680 PTHR11709//PTHR11709:SF94 - MULTI-COPPER OXIDASE // LACCASE-15 A05 - View
Gossypium hirsutum Gohir.D05G249400 PTHR11709//PTHR11709:SF94 - MULTI-COPPER OXIDASE // LACCASE-15 D05 - View
Glycine max Glyma.20G172600 PTHR11709//PTHR11709:SF94 - MULTI-COPPER OXIDASE // LACCASE-15 Gm20 + View
Glycine max Glyma.10G219100 PTHR11709//PTHR11709:SF94 - MULTI-COPPER OXIDASE // LACCASE-15 Gm10 + View
Gossypium raimondii Gorai.009G260400 Chr09 - View
Gossypium raimondii Gorai.010G130100 Chr10 + View
Hydrangea macrophylla Hma1.2p1_0358F.1_g134980 Hma1.2p1_0358F.1 - View
Lupinus albus Lalb_Chr02g0141681 PTHR11709:SF94 - LACCASE-15 Lalb_Chr02 - View
Lotus japonicus Lj4g0005032 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase chr4 - View
Lotus japonicus Lj5g0019648 PTHR11709:SF94 - LACCASE-15 chr5 - View
Lonicera japonica Lj4C706G21 GWHAAZE00000004 - View
Lonicera japonica Lj2A554T36 GWHAAZE00000002 + View
Lonicera japonica Lj7C388T18 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_1_5581 PTHR11709:SF94 - LACCASE-15 Lsat_1_v8_lg_1 - View
Magnolia biondii MBI02_g38913_MAGBIO AED:0.10 Chr02 - View
Malus domestica MD15G1328900 Cupredoxin superfamily protein Chr15 - View
Malus domestica MD10G1042300 Laccase/Diphenol oxidase family protein Chr10 - View
Manihot esculenta Manes.12G138500 Chromosome12 + View
Manihot esculenta Manes.02G187200 Chromosome02 - View
Nelumbo nucifera Nn5g29009 chr5 - View
Nelumbo nucifera Nn5g28910 chr5 - View
Olea europaea Oeu061462.1 chr7 - View
Oryza sativa ssp. japonica Os02g0749700 Laccase, Lignin biosynthesis, Response to Cu stress of rice roots chr02 - View
Petunia axillaris Peaxi162Scf00226g00919 laccase 14 Peaxi162Scf00226 - View
Petunia axillaris Peaxi162Scf00160g01641 laccase 14 Peaxi162Scf00160 + View
Punica granatum PGR042G0974 NC_045130.1 + View
Prunus persica Prupe.8G046800 PTHR11709:SF94 - LACCASE-15 Pp08 - View
Papaver somniferum PSO541G3257 NC_039363.1 + View
Papaver somniferum PSO133G0064 NW_020618823.1 + View
Populus trichocarpa Potri.005G200500 PTHR11709//PTHR11709:SF88 - MULTI-COPPER OXIDASE // LACCASE-14 Chr05 - View
Phaseolus vulgaris Phvul.007G086400 PTHR11709:SF94 - LACCASE-15 Chr07 + View
Quercus lobata QL06p050340 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0115431 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim11G0090600 chr11 - View
Salvia bowleyana SalBow6G2759 GWHASIU00000002 - View
Salvia bowleyana SalBow7G3800 GWHASIU00000005 - View
Salix brachista Sabra05G0152500 GWHAAZH00000005 - View
Salix brachista Sabra07G0072800 GWHAAZH00000007 - View
Sapria himalayana SHI09132 scaffold9_16683904 + View
Solanum lycopersicum Solyc04g072280.3 Laccase (AHRD V3.3 *** K4BTL5_SOLLC) SL4.0ch04 + View
Solanum lycopersicum Solyc12g056820.2 Laccase (AHRD V3.3 *** K4DG13_SOLLC) SL4.0ch12 - View
Solanum lycopersicum Solyc04g054690.3 ascorbate oxidase SL4.0ch04 - View
Schrenkiella parvula Sp7g36060 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase ch7-6 - View
Solanum pennellii Sopen12g029500 Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds. | TRANSPARENT TESTA 10 (TT10) | FUNCTIONS IN: copper ion binding, laccase activity | INVOLVED IN: lignin biosynthetic process, response to copper ion, flavonoid biosynthetic process | LOCATED IN: endomembrane system, apoplast | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, seed development stages | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Laccase , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: laccase 14 Spenn-ch12 - View
Solanum pennellii Sopen04g024440 Cupredoxin superfamily protein | FUNCTIONS IN: oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding | INVOLVED IN: oxidation reduction | LOCATED IN: endomembrane system, extracellular region | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 , L-ascorbate oxidase, plants | BEST Arabidopsis thaliana protein match is: Plant L-ascorbate oxidase Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400027914 Ascorbate oxidase ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG400016953 Laccase ST4.03ch12 - View
Solanum tuberosum PGSC0003DMG400021966 Laccase ST4.03ch04 + View
Trochodendron aralioides TAR625G0126 group4 - View
Trochodendron aralioides TAR628G1144 group5 - View
Trochodendron aralioides TAR628G0797 group5 - View
Trochodendron aralioides TAR625G1080 group4 - View
Trochodendron aralioides TAR381G0886 group11 + View
Theobroma cacao Thecc.08G197300 Secretory laccase Chromosome_8 - View
Theobroma cacao Thecc.01G106400 Cupredoxin superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104800224 laccase-15 NW_010969032.1 - View
Vaccinium macrocarpon vmacro21207 Similar to LAC14: Laccase-14 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro01531 Similar to LAC14: Laccase-14 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G1573 CM024077.1 + View
Vitis vinifera GSVIVG01012329001 chr18_random + View