Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0014663 putative sodium-coupled neutral amino acid transporter 6 [Gossypium arboreum] Contig1096 - View
CSS0014870 putative sodium-coupled neutral amino acid transporter 6 [Gossypium arboreum] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G3700 LG-2 + View
Aethionema arabicum Aa31LG9G16870 LG-9 - View
Acer truncatum Atru.chr8.587 chr8 + View
Actinidia chinensis Actinidia17613 Lachesis_group21 - View
Actinidia chinensis Actinidia26278 Lachesis_group3 - View
Actinidia chinensis Actinidia36280 Lachesis_group4 - View
Actinidia chinensis Actinidia18096 Lachesis_group11 - View
Arabidopsis lyrata AL5G20100 scaffold_5 - View
Arabidopsis lyrata AL7G51620 scaffold_7 - View
Avicennia marina MSTRG.2966 ScioBoG_102835_HRSCAF_103059 + View
Amaranthus hybridus Ah.10g038330 Amino acid transporter AVT6B (AtAvt6B) AmaHy_arrow1_Scaffold_10 + View
Aquilegia oxysepala Aqoxy3G00571 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5Q7SRA PTHR22950//PTHR22950:SF237 - AMINO ACID TRANSPORTER // AMINO ACID TRANSPORTER-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RCMT0A PTHR22950//PTHR22950:SF288 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT3G30390 Transmembrane amino acid transporter family protein Encodes a putative amino acid transporter. Transmembrane amino acid transporter family protein%3B FUNCTIONS IN: amino acid transmembrane transporter activity%3B INVOLVED IN: amino acid transport%3B LOCATED IN: plasma membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Amino acid transporter%2C transmembrane (InterPro:IPR013057)%3B BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1)%3B Has 4285 Blast hits to 4220 proteins in 397 species: Archae - 8%3B Bacteria - 394%3B Metazoa - 1411%3B Fungi - 683%3B Plants - 986%3B Viruses - 5%3B Other Eukaryotes - 798 (source: NCBI BLink). Transmembrane amino acid transporter family protein%3B FUNCTIONS IN: amino acid transmembrane transporter activity%3B INVOLVED IN: amino acid transport%3B LOCATED IN: plasma membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Amino acid transporter%2C transmembrane (InterPro:IPR013057)%3B BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G38820.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G38820 Transmembrane amino acid transporter family protein Encodes a putative amino acid transporter. Transmembrane amino acid transporter family protein%3B CONTAINS InterPro DOMAIN/s: Amino acid transporter%2C transmembrane (InterPro:IPR013057)%3B BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G30390.2)%3B Has 4324 Blast hits to 4257 proteins in 375 species: Archae - 16%3B Bacteria - 268%3B Metazoa - 1444%3B Fungi - 800%3B Plants - 936%3B Viruses - 5%3B Other Eukaryotes - 855 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0691G087 AmTr_v1.0_scaffold00006 - View
Brassica carinata BcaC06g33721 ChrC06 - View
Brassica carinata BcaC06g30845 ChrC06 + View
Brassica carinata BcaC02g09669 ChrC02 + View
Brassica napus A04p11650 A04 + View
Brassica napus A06p39690 A06 + View
Brassica napus A02p37070 A02 - View
Brassica napus C02p56070 C02 - View
Brassica napus C04p45380 C04 + View
Brassica napus C07p38580 C07 - View
Brassica oleracea BolC7t44379H C7 - View
Brassica oleracea BolC2t11662H C2 - View
Brassica oleracea BolC4t26120H C4 + View
Brassica rapa BraA06t26884Z A06 + View
Brassica rapa BraA02t08693Z A02 - View
Brassica rapa BraA04t16833Z A04 + View
Beta vulgaris EL10Ac2g04410 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Chr2_EL10_PGA_scaffold6 - View
Capsicum annuum CAN.G93.46 PGAv.1.6.scaffold93 + View
Capsicum annuum CAN.G497.43 PGAv.1.6.scaffold497 + View
Cannabis sativa CANSAT64G1892 NC_044379.1 + View
Corylus avellana Haze_14357 Similar to AVT6A: Amino acid transporter AVT6A (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_11846 Similar to AVT6A: Amino acid transporter AVT6A (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc07_g04660 Putative Sodium-coupled neutral amino acid transporter 3 chr7 - View
Coffea canephora Cc11_g11400 Putative Sodium-coupled neutral amino acid transporter 2 chr11 + View
Citrus clementina Ciclev10011669m.g scaffold_6 - View
Carpinus fangiana Cfa007715 Cfa03 - View
Carpinus fangiana Cfa008832 Cfa03 + View
Cardamine hirsuta CARHR263850 Amino acid transporter family protein Chr8 - View
Cardamine hirsuta CARHR153490 Amino acid transporter, putative Chr5 - View
Carya illinoinensis CiPaw.04G051000 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Chr04 + View
Carya illinoinensis CiPaw.03G081000 PTHR22950//PTHR22950:SF237 - AMINO ACID TRANSPORTER // AMINO ACID TRANSPORTER-RELATED Chr03 + View
Citrullus lanatus ClCG07G016150 Amino acid transporter, putative CG_Chr07 - View
Carica papaya Cpa.g.sc14.257 supercontig_14 - View
Chenopodium quinoa AUR62009454 Slc38a1: Sodium-coupled neutral amino acid transporter 1 C_Quinoa_Scaffold_3674 - View
Chenopodium quinoa AUR62023136 SLC38A1: Sodium-coupled neutral amino acid transporter 1 C_Quinoa_Scaffold_1189 - View
Capsella rubella Carub.0007s3705 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) scaffold_7 - View
Capsella rubella Carub.0005s0861 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) scaffold_5 - View
Daucus carota DCAR_010999 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv15567 GWHABJS00000018 + View
Davidia involucrata Dinv33881 GWHABJS00000014 - View
Davidia involucrata Dinv34892 GWHABJS00000012 + View
Durio zibethinus Duzib211G0270 NW_019168049.1 - View
Durio zibethinus Duzib138G0889 NW_019167893.1 - View
Durio zibethinus Duzib133G0330 NW_019167938.1 - View
Erigeron canadensis ECA233G3164 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA232G0605 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.I02085 Chr09 - View
Erythranthe guttata Migut.H00574 scaffold_8 + View
Erythranthe guttata Migut.E00259 scaffold_5 - View
Eutrema salsugineum Thhalv10028319m.g K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) scaffold_14 - View
Eutrema salsugineum Thhalv10004179m.g K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) scaffold_6 + View
Fragaria x ananassa FAN14G4085 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Fvb6-1 - View
Fragaria x ananassa FAN09G4193 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Fvb6-2 - View
Fragaria x ananassa FAN05G0386 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Fvb6-3 - View
Fragaria x ananassa FAN02G0540 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Fvb6-4 - View
Fragaria vesca FvH4_6g46060 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Fvb6 - View
Fragaria vesca FvH4_4g28960 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Fvb4 + View
Gossypium hirsutum Gohir.A07G177500 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) A07 - View
Gossypium hirsutum Gohir.D07G185500 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) D07 + View
Gossypium hirsutum Gohir.A11G160800 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) A11 - View
Glycine max Glyma.18G276800 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Gm18 - View
Glycine max Glyma.13G051100 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Gm13 + View
Glycine max Glyma.19G037400 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Gm19 - View
Glycine max Glyma.08G254200 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Gm08 - View
Gossypium raimondii Gorai.001G206000 Chr01 + View
Helianthus annuus HanXRQChr15g0464921 Probable transmembrane amino acid transporter family protein HanXRQChr15 - View
Lupinus albus Lalb_Chr10g0092541 PTHR22950//PTHR22950:SF288 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Lalb_Chr10 + View
Lupinus albus Lalb_Chr21g0318131 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Lalb_Chr21 + View
Lupinus albus Lalb_Chr17g0336751 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Lalb_Chr17 + View
Lupinus albus Lalb_Chr06g0174811 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Lalb_Chr06 + View
Lupinus albus Lalb_Chr04g0258301 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Lalb_Chr04 + View
Lotus japonicus Lj2g0018667 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) chr2 - View
Lotus japonicus Lj1g0023713 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) chr1 + View
Lonicera japonica Lj4A127T89 GWHAAZE00000004 - View
Lonicera japonica Lj6A773T126 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_8_36800 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_4_173900 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Lsat_1_v8_lg_4 - View
Malus domestica MD09G1077200 Transmembrane amino acid transporter family protein Chr09 - View
Malus domestica MD16G1053900 Transmembrane amino acid transporter family protein Chr16 + View
Malus domestica MD17G1067600 Transmembrane amino acid transporter family protein Chr17 - View
Manihot esculenta Manes.02G061400 Chromosome02 - View
Manihot esculenta Manes.01G105000 Chromosome01 - View
Manihot esculenta Manes.14G091800 Chromosome14 - View
Medicago truncatula Medtr6g016245 transmembrane amino acid transporter family protein chr6 + View
Medicago truncatula Medtr7g017630 transmembrane amino acid transporter family protein chr7 - View
Nelumbo nucifera Nn4g23571 chr4 - View
Nicotiana tabacum Nitab4.5_0002978g0050 Amino acid transporter, transmembrane Nitab4.5_0002978 + View
Olea europaea Oeu032841.1 chr18 - View
Petunia axillaris Peaxi162Scf00020g02020 Transmembrane amino acid transporter family protein Peaxi162Scf00020 + View
Petunia axillaris Peaxi162Scf00019g00321 Transmembrane amino acid transporter family protein Peaxi162Scf00019 - View
Punica granatum PGR004G1798 NC_045131.1 + View
Prunus persica Prupe.3G246600 Pp03 - View
Prunus persica Prupe.1G295800 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Pp01 - View
Pisum sativum Psat1g064280 Transmembrane amino acid transporter protein chr1LG6 - View
Papaver somniferum PSO017G0709 NC_039362.1 - View
Papaver somniferum PSO478G0971 NC_039361.1 + View
Populus trichocarpa Potri.010G136601 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Chr10 + View
Populus trichocarpa Potri.017G106300 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Chr17 - View
Populus trichocarpa Potri.004G111400 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Chr04 + View
Phaseolus vulgaris Phvul.004G045100 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Chr04 - View
Phaseolus vulgaris Phvul.008G024100 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) Chr08 + View
Rosa chinensis RcHm_v2.0_Chr4g0437101 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0070000 chr12 + View
Rhododendron simsii Rhsim08G0078600 chr08 - View
Rhododendron simsii Rhsim10G0060600 chr10 - View
Striga asiatica SGA_v2.0_scaffold4G02352 scaffold4 + View
Salvia bowleyana SalBow1G5501 GWHASIU00000001 + View
Salix brachista Sabra17G0089300 GWHAAZH00000017 - View
Salix brachista Sabra04G0073000 GWHAAZH00000004 - View
Sechium edule Sed0012305 LG06 - View
Solanum lycopersicum Solyc02g089400.4 Amino acid transporter (AHRD V3.3 *** A0A200QY84_9MAGN) SL4.0ch02 - View
Solanum lycopersicum Solyc02g065680.3 Amino acid transporter (AHRD V3.3 *** A0A200QY84_9MAGN) SL4.0ch02 + View
Schrenkiella parvula Sp2g18180 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) ch2-4 - View
Schrenkiella parvula Sp7g03110 K14207 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 (SLC38A2, SNAT2) ch7-1 - View
Solanum pennellii Sopen02g015900 Encodes a putative amino acid transporter. | Transmembrane amino acid transporter family protein | FUNCTIONS IN: amino acid transmembrane transporter activity | INVOLVED IN: amino acid transport | LOCATED IN: plasma membrane, vacuole, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane | BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein Spenn-ch02 + View
Solanum pennellii Sopen02g034160 Encodes a putative amino acid transporter. | Transmembrane amino acid transporter family protein | FUNCTIONS IN: amino acid transmembrane transporter activity | INVOLVED IN: amino acid transport | LOCATED IN: plasma membrane, vacuole, membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane | BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400026549 Amino acid transporter ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400001474 Amino acid transporter ST4.03ch02 + View
Trochodendron aralioides TAR629G3079 group0 + View
Trochodendron aralioides TAR622G0751 group8 + View
Tarenaya hassleriana THA.LOC104805536 probable sodium-coupled neutral amino acid transporter 6 NW_010961290.1 - View
Trifolium pratense TPR.G3301 Tp57577_TGAC_v2_scaf_82 - View
Tripterygium wilfordii TWI32G0885 NC_052254.1 + View
Tripterygium wilfordii TWI34G0827 NC_052235.1 + View
Utricularia gibba unitig_899.g15115 unitig_899 - View
Utricularia gibba unitig_736.g22263 unitig_736 + View
Vaccinium macrocarpon vmacro05602 Similar to AVT6A: Amino acid transporter AVT6A (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro18117 Similar to AVT6A: Amino acid transporter AVT6A (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0464G0534 CM024077.1 - View
Vigna mungo VMungo1383G1802 CM024070.1 + View
Vitis vinifera GSVIVG01036513001 chr14 + View
Zea mays Zm00001eb380520 Zm00001e036819 Transmembrane amino acid transporter family protein 9 + View