Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0028029 PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nicotiana tomentosiformis] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G11990 LG-1 - View
Acer truncatum Atru.chr3.4016 chr3 - View
Actinidia chinensis Actinidia23914 Lachesis_group9 - View
Arabidopsis lyrata AL8G35510 scaffold_8 - View
Arabidopsis thaliana AT5G59180 DNA-directed RNA polymerase II Non-catalytic subunit specific to DNA-directed RNA polymerase II%3B the ortholog of budding yeast RPB7 NRPB7%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C RNA binding%3B INVOLVED IN: transcription%3B LOCATED IN: DNA-directed RNA polymerase II%2C core complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Ribosomal protein S1%2C RNA-binding domain (InterPro:IPR003029)%2C RNA polymerase Rpb7%2C N-terminal (InterPro:IPR005576)%3B BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like%2C N-terminal domain (TAIR:AT4G14660.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB08g36284 ChrB08 + View
Brassica napus C09p51390 C09 - View
Brassica napus C03p13980 C03 + View
Brassica oleracea BolC3t13845H C3 + View
Brassica rapa BraA10t43718Z A10 - View
Beta vulgaris EL10Ac7g16082 K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G) Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G141.22 PGAv.1.6.scaffold141 - View
Coffea canephora Cc01_g13450 DNA-directed RNA polymerase II subunit RPB7 chr1 - View
Citrus clementina Ciclev10029380m.g scaffold_8 - View
Cardamine hirsuta CARHR285370 DNA-directed RNA polymerase II subunit RPB7 NSCAFA.214I - View
Carya illinoinensis CiPaw.14G064200 K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G) Chr14 + View
Corchorus olitorius COL.COLO4_18592 hypothetical protein AWUE01016479.1 - View
Carica papaya Cpa.g.sc81.63 supercontig_81 + View
Chenopodium quinoa AUR62020050 DNA-directed RNA polymerase II subunit RPB7 C_Quinoa_Scaffold_2465 - View
Capsella rubella Carub.0008s1977 K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G) scaffold_8 - View
Daucus carota DCAR_007422 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv43095 GWHABJS00000085 + View
Davidia involucrata Dinv43002 GWHABJS00000085 - View
Davidia involucrata Dinv17058 GWHABJS00000530 - View
Durio zibethinus Duzib150G0800 NW_019167882.1 - View
Eucalyptus grandis Eucgr.J01999 Chr10 + View
Eutrema salsugineum Thhalv10014822m.g scaffold_2 + View
Gossypium hirsutum Gohir.D05G093400 PF00575//PF03876 - S1 RNA binding domain (S1) // SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 (SHS2_Rpb7-N) D05 + View
Gossypium hirsutum Gohir.A05G092600 KOG3298 - DNA-directed RNA polymerase subunit E' A05 + View
Gossypium raimondii Gorai.009G096000 Chr09 + View
Hydrangea macrophylla Hma1.2p1_0274F.1_g110460 Hma1.2p1_0274F.1 + View
Lonicera japonica Lj1A145T59 GWHAAZE00000001 + View
Magnolia biondii MBI05_g02651_MAGBIO AED:0.27 Chr05 - View
Manihot esculenta Manes.02G127300 Chromosome02 + View
Olea europaea Oeu007669.1 scaffold1280 - View
Petunia axillaris Peaxi162Scf00481g00055 DNA-directed RNA polymerase II subunit RPB7 Peaxi162Scf00481 - View
Punica granatum PGR102G0470 NC_045129.1 + View
Rhododendron simsii Rhsim01G0232900 chr01 - View
Simmondsia chinensis Sc12g0001200 GWHAASQ00000012 + View
Solanum lycopersicum Solyc06g005790.3 DNA-directed RNA polymerase II subunit RPB7 (AHRD V3.3 *** A0A1U8H425_CAPAN) SL4.0ch06 - View
Schrenkiella parvula Sp6g20810 K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G) ch6-6 - View
Solanum pennellii Sopen06g001770 DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) - Glycine max (Soybean), Non-catalytic subunit specific to DNA-directed RNA polymerase II | the ortholog of budding yeast RPB7 | NRPB7 | FUNCTIONS IN: DNA-directed RNA polymerase activity, RNA binding | INVOLVED IN: transcription | LOCATED IN: DNA-directed RNA polymerase II, core complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Ribosomal protein S1, RNA-binding domain , RNA polymerase Rpb7, N-terminal | BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb7-like, N-terminal domain Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400020826 DNA-directed RNA polymerase II 19 kD polypeptide rpb7 ST4.03ch06 + View
Selenicereus undatus Hund18882 Scaffold_33675 + View
Trochodendron aralioides TAR369G0144 group18 - View
Theobroma cacao Thecc.09G313400 DNA-directed RNA polymerase II Chromosome_9 + View
Tarenaya hassleriana THA.LOC104810752 DNA-directed RNA polymerase II subunit 7 NW_010965304.1 + View
Tarenaya hassleriana THA.LOC104799424 DNA-directed RNA polymerase II subunit 7-like NW_010968505.1 + View
Tripterygium wilfordii TWI75G1574 NC_052253.1 + View
Tripterygium wilfordii TWI31G1060 NC_052233.1 + View
Vaccinium macrocarpon vmacro14563 Similar to DNA-directed RNA polymerase II subunit RPB7 (Glycine max OX%3D3847) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01024869001 chr6 - View