Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008022 hypothetical protein CICLE_v10019597mg [Citrus clementina] Chr3 + View
CSS0037237 PREDICTED: probable polygalacturonase [Vitis vinifera] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.356 chr1 - View
Acer truncatum Atru.chr5.541_Atru.chr5.542 chr5 + View
Acer truncatum Atru.chr9.2133 chr9 - View
Acer truncatum Atru.ctg97_1.25 ctg97_1 + View
Actinidia chinensis Actinidia28354 Lachesis_group23 - View
Actinidia chinensis Actinidia08579 Lachesis_group6 - View
Avicennia marina MSTRG.11961 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.4842 ScioBoG_102838_HRSCAF_103081 + View
Avicennia marina MSTRG.27086 ScioBoG_8578_HRSCAF_8617 - View
Amaranthus hybridus Ah.07g196630 AmaHy_arrow1_Scaffold_7 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q4BXH8 PTHR31339//PTHR31339:SF7 - FAMILY NOT NAMED // POLYGALACTURONASE-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.77IXXA PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VQ58UF PTHR31339//PTHR31339:SF7 - FAMILY NOT NAMED // POLYGALACTURONASE-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XU3PKM PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ETW0X5 PTHR31339:SF12 - POLYGALACTURONASE-LIKE PROTEIN arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT4G23500 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: cell wall%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Pectin lyase fold (InterPro:IPR012334)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G61490.3)%3B Has 4172 Blast hits to 4159 proteins in 509 species: Archae - 6%3B Bacteria - 1479%3B Metazoa - 14%3B Fungi - 1128%3B Plants - 1399%3B Viruses - 0%3B Other Eukaryotes - 146 (source: NCBI BLink). Chr4 + View
Beta vulgaris EL10Ac3g05421 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Chr3_EL10_PGA_scaffold7 - View
Beta vulgaris EL10Ac5g12823 PTHR31339:SF7 - POLYGALACTURONASE-RELATED Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G126.23 PGAv.1.6.scaffold126 + View
Capsicum annuum CAN.G78.114 PGAv.1.6.scaffold78 - View
Cicer arietinum L. Ca_10723_v3 Ca_LG4_v3 - View
Corylus avellana Haze_08830 Similar to GSVIVT00026920001: Probable polygalacturonase (Vitis vinifera OX%3D29760) 4 + View
Corylus avellana Haze_00044 Similar to GSVIVT00026920001: Probable polygalacturonase (Vitis vinifera OX%3D29760) 1 + View
Coffea canephora Cc08_g15150 Probable polygalacturonase chr8 + View
Citrus clementina Ciclev10004864m.g scaffold_9 + View
Carpinus fangiana Cfa016287 Cfa06 + View
Carpinus fangiana Cfa003889 Cfa01 - View
Carya illinoinensis CiPaw.01G065000 PTHR31339:SF12 - POLYGALACTURONASE-LIKE PROTEIN Chr01 + View
Carya illinoinensis CiPaw.11G131000 PTHR31339:SF7 - POLYGALACTURONASE-RELATED Chr11 - View
Carya illinoinensis CiPaw.05G262400 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Chr05 - View
Citrullus lanatus ClCG05G001360 Pectin lyase-like superfamily protein LENGTH=476 CG_Chr05 - View
Citrullus lanatus ClCG01G000920 Pectin lyase-like superfamily protein LENGTH=469 CG_Chr01 - View
Cucumis melo MELO3C006092.2 Glycoside hydrolase family 28 protein/polygalacturonase family protein chr06 - View
Cucumis melo MELO3C005839.2 Glycoside hydrolase family 28 protein/polygalacturonase family protein chr09 + View
Chenopodium quinoa AUR62021121 GSVIVT00026920001: Probable polygalacturonase C_Quinoa_Scaffold_1783 - View
Chenopodium quinoa AUR62019741 GSVIVT00026920001: Probable polygalacturonase C_Quinoa_Scaffold_1480 + View
Chenopodium quinoa AUR62031421 GSVIVT00026920001: Probable polygalacturonase C_Quinoa_Scaffold_2963 + View
Cucumis sativus L. CsaV3_5G001070 Pectin lyase-like superfamily protein chr5 - View
Daucus carota DCAR_006942 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv37606 GWHABJS00000017 - View
Davidia involucrata Dinv32506 GWHABJS00000020 + View
Davidia involucrata Dinv28386 GWHABJS00000004 - View
Durio zibethinus Duzib205G1172 NW_019168381.1 + View
Durio zibethinus Duzib084G0688 NW_019167827.1 + View
Durio zibethinus Duzib133G1319 NW_019167938.1 + View
Erigeron canadensis ECA233G5087 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.D01821 Chr04 - View
Eucalyptus grandis Eucgr.E00104 Chr05 - View
Eucalyptus grandis Eucgr.A02740 Chr01 - View
Erythranthe guttata Migut.F00291 scaffold_6 - View
Fragaria x ananassa FAN10G0461 PTHR31339//PTHR31339:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE-LIKE PROTEIN Fvb7-1 + View
Fragaria x ananassa FAN18G3109 PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Fvb5-1 - View
Fragaria x ananassa FAN06G3323 PTHR31339//PTHR31339:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE-LIKE PROTEIN Fvb7-2 + View
Gossypium hirsutum Gohir.D11G011500 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED D11 + View
Gossypium hirsutum Gohir.A11G012300 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED A11 + View
Gossypium hirsutum Gohir.D12G256500 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED D12 - View
Gossypium hirsutum Gohir.D08G135700 PTHR31339//PTHR31339:SF7 - FAMILY NOT NAMED // POLYGALACTURONASE-RELATED D08 - View
Gossypium hirsutum Gohir.A12G254200 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED A12 - View
Glycine max Glyma.20G162700 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Gm20 + View
Glycine max Glyma.16G179000 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Gm16 - View
Glycine max Glyma.09G132100 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Gm09 - View
Glycine max Glyma.10G230900 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Gm10 - View
Gossypium raimondii Gorai.007G012900 Chr07 + View
Gossypium raimondii Gorai.008G274700 Chr08 - View
Hydrangea macrophylla Hma1.2p1_0216F.1_g090980 Hma1.2p1_0216F.1 + View
Hydrangea macrophylla Hma1.2p1_0327F.1_g126430 Hma1.2p1_0327F.1 + View
Lupinus albus Lalb_Chr02g0141251 PTHR31339//PTHR31339:SF17 - FAMILY NOT NAMED // ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Lalb_Chr02 + View
Lupinus albus Lalb_Chr05g0224571 PTHR31339:SF7 - POLYGALACTURONASE-RELATED Lalb_Chr05 - View
Lotus japonicus Lj4g0017995 PTHR31339//PTHR31339:SF7 - FAMILY NOT NAMED // POLYGALACTURONASE-RELATED chr4 - View
Lonicera japonica Lj2C180T11 GWHAAZE00000002 - View
Lonicera japonica Lj1A1005T64 GWHAAZE00000001 + View
Lonicera japonica Lj9A587T92 GWHAAZE00000009 + View
Lonicera japonica Lj8A18G62 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_8_6601 Lsat_1_v8_lg_8 - View
Malus domestica MD14G1110300 Pectin lyase-like superfamily protein Chr14 + View
Malus domestica MD01G1068900 Pectin lyase-like superfamily protein Chr01 + View
Malus domestica MD07G1279000 Pectin lyase-like superfamily protein Chr07 + View
Malus domestica MD01G1208400 Pectin lyase-like superfamily protein Chr01 + View
Manihot esculenta Manes.05G031300 Chromosome05 - View
Manihot esculenta Manes.14G021800 Chromosome14 + View
Medicago truncatula Medtr1g099850 pectin lyase superfamily protein chr1 - View
Petunia axillaris Peaxi162Scf00074g01824 Pectin lyase-like superfamily protein Peaxi162Scf00074 - View
Petunia axillaris Peaxi162Scf00444g00121 Protein kinase superfamily protein Peaxi162Scf00444 + View
Punica granatum PGR031G3975 NC_045127.1 + View
Punica granatum PGR042G0539 NC_045130.1 - View
Prunus persica Prupe.2G300900 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Pp02 + View
Papaver somniferum PSO170G3477 NC_039360.1 - View
Populus trichocarpa Potri.004G073900 PTHR31339//PTHR31339:SF7 - FAMILY NOT NAMED // POLYGALACTURONASE-RELATED Chr04 - View
Populus trichocarpa Potri.001G100000 PTHR31339//PTHR31339:SF7 - FAMILY NOT NAMED // POLYGALACTURONASE-RELATED Chr01 - View
Populus trichocarpa Potri.017G145900 PTHR31339//PTHR31339:SF7 - FAMILY NOT NAMED // POLYGALACTURONASE-RELATED Chr17 + View
Phaseolus vulgaris Phvul.004G108800 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Chr04 - View
Phaseolus vulgaris Phvul.002G292300 PTHR31339:SF7 - POLYGALACTURONASE-RELATED Chr02 + View
Phaseolus vulgaris Phvul.007G074300 PTHR31339:SF17 - ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED Chr07 + View
Quercus lobata QL09p012808 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0378321 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr7g0196791 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim02G0234900 chr02 + View
Rhododendron simsii Rhsim07G0011900 chr07 - View
Striga asiatica SGA_v2.0_scaffold44G16749 scaffold44 + View
Striga asiatica SGA_v2.0_scaffold60G21110 scaffold60 + View
Salix brachista Sabra04G0048600 GWHAAZH00000004 - View
Salix brachista Sabra03G0094100 GWHAAZH00000003 + View
Salix brachista Sabra01G0075000 GWHAAZH00000001 - View
Simmondsia chinensis Sc13g0009180 GWHAASQ00000013 + View
Sechium edule Sed0022004 LG01 - View
Sapria himalayana SHI13755 scaffold21_10161493 - View
Solanum lycopersicum Solyc01g094970.4 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A1I9LS88_ARATH) SL4.0ch01 - View
Solanum lycopersicum Solyc03g007940.4 Pectin lyase-like superfamily protein (AHRD V3.3 *** O81746_ARATH) SL4.0ch03 - View
Solanum lycopersicum Solyc08g081480.3 Pectin lyase-like superfamily protein (AHRD V3.3 *** O81746_ARATH) SL4.0ch08 + View
Schrenkiella parvula Sp7g21400 PTHR31339//PTHR31339:SF7 - FAMILY NOT NAMED // POLYGALACTURONASE-RELATED ch7-4 + View
Solanum pennellii Sopen08g029810 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: cell wall | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch08 + View
Solanum pennellii Sopen03g003880 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: central cell, flower | EXPRESSED DURING: petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch03 - View
Solanum pennellii Sopen01g038750 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein ., Pectin lyase fold, Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) - Zea mays (Maize) Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG402012324 Polygalacturonase ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG401009510 Polygalacturonase ST4.03ch03 + View
Selenicereus undatus Hund11720 Scaffold_33679 - View
Trochodendron aralioides TAR375G0534 group15 + View
Trochodendron aralioides TAR629G3437 group0 + View
Theobroma cacao Thecc.03G184300 Pectin lyase-like superfamily protein Chromosome_3 + View
Tripterygium wilfordii TWI39G0718 NC_052250.1 + View
Vaccinium macrocarpon vmacro11402 Similar to GSVIVT00026920001: Probable polygalacturonase (Vitis vinifera OX%3D29760) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06627 Similar to GSVIVT00026920001: Probable polygalacturonase (Vitis vinifera OX%3D29760) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0464G0863 CM024077.1 - View
Vigna mungo VMungo0720G1792 CM024071.1 - View
Vigna mungo VMungo0251G2537 CM024069.1 + View
Vitis vinifera GSVIVG01028861001 chr16 + View