Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0026263 PREDICTED: uncharacterized protein LOC100245350 isoform X1 [Vitis vinifera] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G7310 LG-4 - View
Acer truncatum Atru.chr13.1574 chr13 + View
Actinidia chinensis Actinidia21275 Lachesis_group28 - View
Actinidia chinensis Actinidia15211 Lachesis_group26 - View
Arabidopsis lyrata AL2G37500 scaffold_2 - View
Avicennia marina MSTRG.1411 ScioBoG_102833_HRSCAF_103052 - View
Amaranthus hybridus Ah.05g169110 Histone-lysine N-methyltransferase ASHH2 (EC 2.1.1.-) (ASH1 homolog 2) (H3-K4-HMTase) (Histone H3-K36 methyltransferase 8) (H3-K36-HMTase 8) (Protein EARLY FLOWERING IN SHORT DAYS) (Protein LAZARUS 2) (Protein SET DOMAIN GROUP 8) AmaHy_arrow1_Scaffold_5 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P7B6WW PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z22D2G PF00856//PF07496 - SET domain (SET) // CW-type Zinc Finger (zf-CW) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT1G77300 histone-lysine N-methyltransferase Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%25. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule%2C embryo sac%2C anther and pollen development. EARLY FLOWERING IN SHORT DAYS (EFS)%3B FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific)%3B INVOLVED IN: in 10 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214)%2C Post-SET domain (InterPro:IPR003616)%2C AWS (InterPro:IPR006560)%2C Zinc finger%2C CW-type (InterPro:IPR011124)%3B BEST Arabidopsis thaliana protein match is: SET domain group 26 (TAIR:AT1G76710.2)%3B Has 6189 Blast hits to 6025 proteins in 531 species: Archae - 3%3B Bacteria - 615%3B Metazoa - 2564%3B Fungi - 567%3B Plants - 1123%3B Viruses - 3%3B Other Eukaryotes - 1314 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g47620 ChrC08 + View
Brassica carinata BcaB05g25032 ChrB05 - View
Brassica carinata BcaC03g15727 ChrC03 - View
Brassica napus A07p42840 A07 - View
Brassica napus C06p51460 C06 - View
Brassica oleracea BolC6t40164H C6 - View
Brassica rapa BraA07t31805Z A07 - View
Beta vulgaris EL10Ac1g01359 PTHR22884//PTHR22884:SF276 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Chr1_EL10_PGA_scaffold3 + View
Cicer arietinum L. Ca_16610_v3 Ca_LG5_v3 + View
Corylus avellana Haze_17638 Similar to ASHH2: Histone-lysine N-methyltransferase ASHH2 (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc10_g13740 Putative Histone-lysine N-methyltransferase ASHH2 chr10 - View
Citrus clementina Ciclev10000005m.g scaffold_5 + View
Carpinus fangiana Cfa018425 Cfa07 - View
Cardamine hirsuta CARHR070780 Histone-lysine N-methyltransferase Chr2 - View
Carya illinoinensis CiPaw.16G022600 PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Chr16 - View
Carya illinoinensis CiPaw.15G031200 PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Chr15 - View
Citrullus lanatus ClCG08G006030 Histone-lysine N-methyltransferase 2A CG_Chr08 + View
Cucumis melo MELO3C008475.2 LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ASHH2 chr03 - View
Chenopodium quinoa AUR62013429 ASHH2: Histone-lysine N-methyltransferase ASHH2 C_Quinoa_Scaffold_1611 + View
Chenopodium quinoa AUR62007714 ASHH2: Histone-lysine N-methyltransferase ASHH2 C_Quinoa_Scaffold_2646 - View
Capsella rubella Carub.0002s2418 scaffold_2 - View
Cucumis sativus L. CsaV3_6G034050 Histone-lysine N-methyltransferase chr6 - View
Daucus carota DCAR_014368 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv14693 GWHABJS00000011 + View
Davidia involucrata Dinv27269 GWHABJS00000002 + View
Durio zibethinus Duzib093G1496 NW_019167937.1 - View
Durio zibethinus Duzib041G0231 NW_019167826.1 + View
Erigeron canadensis ECA246G3937 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.F03851 Chr06 + View
Erythranthe guttata Migut.N03259 scaffold_14 - View
Eutrema salsugineum Thhalv10017998m.g PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC scaffold_9 + View
Fragaria x ananassa FAN20G2668 PTHR22884//PTHR22884:SF276 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Fvb2-3 + View
Fragaria x ananassa FAN24G3136 K11423 - histone-lysine N-methyltransferase SETD2 (SETD2, SET2) Fvb2-2 - View
Fragaria x ananassa FAN15G1688 KOG1081 - Transcription factor NSD1 and related SET domain proteins Fvb2-4 + View
Fragaria x ananassa FAN27G3367 KOG1081 - Transcription factor NSD1 and related SET domain proteins Fvb2-1 + View
Fragaria vesca FvH4_2g27880 PTHR22884//PTHR22884:SF276 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Fvb2 + View
Gossypium hirsutum Gohir.A05G238000 PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC A05 + View
Gossypium hirsutum Gohir.D05G240000 PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC D05 + View
Gossypium hirsutum Gohir.A02G070700 K11423 - histone-lysine N-methyltransferase SETD2 (SETD2, SET2) A02 - View
Gossypium hirsutum Gohir.D02G077900 K11423 - histone-lysine N-methyltransferase SETD2 (SETD2, SET2) D02 - View
Glycine max Glyma.06G117700 PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Gm06 + View
Glycine max Glyma.04G245400 PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Gm04 - View
Gossypium raimondii Gorai.005G087500 Chr05 - View
Gossypium raimondii Gorai.009G248900 Chr09 + View
Lupinus albus Lalb_Chr08g0241051 PTHR22884//PTHR22884:SF276 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Lalb_Chr08 - View
Lupinus albus Lalb_Chr11g0066181 K11423 - histone-lysine N-methyltransferase SETD2 (SETD2, SET2) Lalb_Chr11 + View
Lupinus albus Lalb_Chr23g0271181 K11423 - histone-lysine N-methyltransferase SETD2 (SETD2, SET2) Lalb_Chr23 + View
Lotus japonicus Lj1g0026196 PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC chr1 - View
Lonicera japonica Lj7A351G47 GWHAAZE00000007 + View
Magnolia biondii MBI03_g13487_MAGBIO AED:0.06 Chr03 - View
Malus domestica MD15G1133700 histone methyltransferases(H3-K4 specific) Chr15 - View
Malus domestica MD08G1159600 histone methyltransferases(H3-K4 specific) Chr08 + View
Manihot esculenta Manes.02G168600 Chromosome02 + View
Manihot esculenta Manes.18G082550 Chromosome18 + View
Medicago truncatula Medtr3g088625 histone-lysine N-methyltransferase ASHH2, putative chr3 + View
Nelumbo nucifera Nn5g28439 chr5 + View
Nelumbo nucifera Nn1g08953 chr1 - View
Petunia axillaris Peaxi162Scf00066g00223 Histone-lysine N-methyltransferase, H3 lysine-36 specific Peaxi162Scf00066 + View
Prunus persica Prupe.1G489300 PTHR22884:SF276 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC Pp01 - View
Pisum sativum Psat5g084600 SET domain chr5LG3 - View
Papaver somniferum PSO170G5191 NC_039360.1 - View
Phaseolus vulgaris Phvul.009G130100 Chr09 + View
Quercus lobata QL09p032370 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0296741 RcHm_v2.0_Chr6 + View
Salvia bowleyana SalBow7G0355 GWHASIU00000005 - View
Salvia bowleyana SalBow7G2771 GWHASIU00000005 + View
Salix brachista Sabra05G0138100 GWHAAZH00000005 - View
Sechium edule Sed0009206 LG03 + View
Sechium edule Sed0004584 LG01 + View
Solanum lycopersicum Solyc06g059960.4 Histone-lysine N-methyltransferase ASHH2 (AHRD V3.3 *** A0A2G3C7A5_CAPCH) SL4.0ch06 - View
Solanum lycopersicum Solyc04g057880.3 Histone-lysine N-methyltransferase ASHH2 (AHRD V3.3 *** A0A2G2WXU8_CAPBA) SL4.0ch04 + View
Schrenkiella parvula Sp5g32470 PTHR22884//PTHR22884:SF334 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 ch5-7 - View
Solanum pennellii Sopen04g025730 Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development. | EARLY FLOWERING IN SHORT DAYS (EFS) | FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific) | INVOLVED IN: in 10 processes | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: SET domain , Post-SET domain , AWS , Zinc finger, CW-type | BEST Arabidopsis thaliana protein match is: SET domain group 26 Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG401025314 Huntingtin interacting protein ST4.03ch04 + View
Selenicereus undatus Hund26773 Scaffold_2055 - View
Trochodendron aralioides TAR381G1211 group11 - View
Trochodendron aralioides TAR625G0972 group4 + View
Theobroma cacao Thecc.08G133300 Histone methyltransferases(H3-K4 specific) Chromosome_8 + View
Tarenaya hassleriana THA.LOC104812082 histone-lysine N-methyltransferase ASHH2 NW_010965372.1 - View
Tripterygium wilfordii TWI32G0333 NC_052254.1 - View
Tripterygium wilfordii TWI60G1172 NC_052246.1 - View
Tripterygium wilfordii TWI34G1216 NC_052235.1 + View
Vigna mungo VMungo1309G2033 CM024072.1 + View
Vitis vinifera GSVIVG01008805001 chr18 - View