Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018449 PREDICTED: SEC12-like protein 2 [Vitis vinifera] Contig1076 - View
CSS0005473 PREDICTED: SEC12-like protein 2 [Sesamum indicum] Chr12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G8460 LG-2 + View
Arabidopsis lyrata AL5G10450 scaffold_5 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MZBU3F K14003 - prolactin regulatory element-binding protein (PREB, SEC12) arahy.Tifrunner.gnm1.Arahy.14 + View
Arabidopsis thaliana AT2G01470 SEC12P-like 2 protein Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER. SEC12P-like 2 protein (STL2P)%3B FUNCTIONS IN: nucleotide binding%3B INVOLVED IN: ER to Golgi vesicle-mediated transport%3B LOCATED IN: integral to endoplasmic reticulum membrane%2C endoplasmic reticulum%2C plasma membrane%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1)%3B Has 6374 Blast hits to 3814 proteins in 364 species: Archae - 22%3B Bacteria - 2789%3B Metazoa - 1016%3B Fungi - 1422%3B Plants - 400%3B Viruses - 0%3B Other Eukaryotes - 725 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB07g30396 ChrB07 + View
Brassica carinata BcaC03g17042 ChrC03 - View
Brassica carinata BcaC06g31305 ChrC06 + View
Brassica carinata BcaC06g34175 ChrC06 + View
Brassica napus C07p31890 C07 - View
Brassica napus A06p44420 A06 + View
Brassica napus C02p49570 C02 - View
Brassica napus A02p32000 A02 - View
Brassica oleracea BolC2t11036H C2 - View
Brassica oleracea BolC7t43735H C7 - View
Brassica rapa BraA02t08211Z A02 - View
Brassica rapa BraA06t27316Z A06 + View
Cicer arietinum L. Ca_18738_v3 Ca_LG6_v3 - View
Corylus avellana Haze_10992 Similar to STL2P: SEC12-like protein 2 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g08530 Putative SEC12-like protein 2 chr11 + View
Citrus clementina Ciclev10015444m.g scaffold_2 + View
Cardamine hirsuta CARHR143990 WD40 repeat-containing protein Chr5 - View
Carya illinoinensis CiPaw.05G250700 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Chr05 - View
Carya illinoinensis CiPaw.06G011200 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Chr06 + View
Carica papaya Cpa.g.sc65.151 supercontig_65 - View
Capsella rubella Carub.0005s0043 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) scaffold_5 - View
Cucumis sativus L. CsaV3_5G013310 SEC12-like protein 2 chr5 + View
Daucus carota DCAR_007301 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_030227 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv14423 GWHABJS00000018 - View
Durio zibethinus Duzib248G0828 NW_019168048.1 + View
Durio zibethinus Duzib251G0427 NW_019167971.1 - View
Eucalyptus grandis Eucgr.G02182 Chr07 + View
Erythranthe guttata Migut.E00433 scaffold_5 - View
Eutrema salsugineum Thhalv10000916m.g K14003 - prolactin regulatory element-binding protein (PREB, SEC12) scaffold_20 - View
Fragaria x ananassa FAN17G2843 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Fvb4-2 - View
Fragaria x ananassa FAN12G1857 PF00076//PF00400 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // WD domain, G-beta repeat (WD40) Fvb4-3 - View
Fragaria x ananassa FAN22G0786 PTHR23284:SF2 - SEC12-LIKE PROTEIN 1 Fvb4-1 + View
Fragaria x ananassa FAN07G2064 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Fvb4-4 - View
Glycine max Glyma.07G218700 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Gm07 - View
Lupinus albus Lalb_Chr16g0385011 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Lalb_Chr16 - View
Lupinus albus Lalb_Chr05g0219541 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Lalb_Chr05 - View
Malus domestica MD13G1024400 SEC12P-like 2 protein Chr13 - View
Malus domestica MD16G1027100 SEC12P-like 2 protein Chr16 - View
Manihot esculenta Manes.06G021000 Chromosome06 + View
Manihot esculenta Manes.15G128400 Chromosome15 - View
Manihot esculenta Manes.17G077900 Chromosome17 - View
Medicago truncatula Medtr4g084650 SEC12p-like protein chr4 + View
Nelumbo nucifera Nn4g24190 chr4 - View
Punica granatum PGR119G0308 NC_045132.1 - View
Prunus persica Prupe.1G326100 Pp01 + View
Papaver somniferum PSO478G1659 NC_039361.1 - View
Papaver somniferum PSO017G5972 NC_039362.1 + View
Populus trichocarpa Potri.008G130300 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Chr08 - View
Populus trichocarpa Potri.010G111800 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Chr10 + View
Phaseolus vulgaris Phvul.002G095100 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) Chr02 - View
Quercus lobata QL01p001467 1 + View
Rosa chinensis RcHm_v2.0_Chr4g0441451 RcHm_v2.0_Chr4 + View
Striga asiatica SGA_v2.0_scaffold257G45690 scaffold257 - View
Striga asiatica SGA_v2.0_scaffold39G15183 scaffold39 - View
Salix brachista Sabra08G0098900 GWHAAZH00000008 - View
Salix brachista Sabra10G0082200 GWHAAZH00000010 + View
Schrenkiella parvula Sp2g12920 K14003 - prolactin regulatory element-binding protein (PREB, SEC12) ch2-4 - View
Trochodendron aralioides TAR629G1759 group0 - View
Trochodendron aralioides TAR371G0875 group13 + View
Theobroma cacao Thecc.02G282800 Transducin/WD40 repeat-like superfamily protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104805068 SEC12-like protein 2 NW_010961290.1 - View
Tripterygium wilfordii TWI75G1486 NC_052253.1 - View
Tripterygium wilfordii TWI31G0575 NC_052233.1 + View
Vaccinium macrocarpon vmacro00410 Similar to STL2P: SEC12-like protein 2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G1193 CM024069.1 - View
Vitis vinifera GSVIVG01011745001 chr1 - View