Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0009568 hypothetical protein VITISV_027276 [Vitis vinifera] Chr10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.1660 chr1 + View
Actinidia chinensis Actinidia16671 Lachesis_group4 + View
Actinidia chinensis Actinidia14908 Lachesis_group14 - View
Arabidopsis lyrata AL2G27210 scaffold_2 - View
Arabidopsis lyrata AL2G25350 scaffold_2 + View
Avicennia marina MSTRG.854 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.13546 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.7654 ScioBoG_102841_HRSCAF_103114 + View
Aquilegia oxysepala Aqoxy3G00245 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I5B2UF arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MHX50Y arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT1G68360 C2H2 and C2HC zinc fingers superfamily protein Encodes a nuclear localized member of the C2H2 family of TFIIIA transcription factors.GIS3 is involved in trichome initiation and development downstream of GA and cytokinin signaling. GIS regulates the expression GIS and GIS2. C2H2 and C2HC zinc fingers superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1)%3B Has 1137 Blast hits to 1135 proteins in 43 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 10%3B Fungi - 0%3B Plants - 1124%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB03g15413 ChrB03 - View
Brassica carinata BcaB05g24373 ChrB05 - View
Brassica carinata BcaC03g14939 ChrC03 - View
Brassica carinata BcaB03g15815 ChrB03 + View
Brassica napus C06p41650 C06 + View
Brassica napus C02p24450 C02 - View
Brassica napus A07p34760 A07 - View
Brassica napus A02p14920 A02 - View
Brassica oleracea BolC2t08550H C2 - View
Brassica oleracea BolC6t39261H C6 - View
Brassica rapa BraA02t06558Z A02 - View
Beta vulgaris EL10Ac6g14353 Chr6_EL10_PGA_scaffold0 + View
Capsicum annuum CAN.G610.60 PGAv.1.6.scaffold610 + View
Cannabis sativa CANSAT01G2668 NC_044373.1 + View
Cicer arietinum L. Ca_11147_v3 Ca_LG4_v3 + View
Corylus avellana Haze_00624 Protein of unknown function 1 - View
Coffea canephora Cc11_g09880 Putative Zinc finger protein 6 chr11 + View
Citrus clementina Ciclev10013754m.g scaffold_6 + View
Citrus clementina Ciclev10016426m.g scaffold_2 + View
Ceratophyllum demersum CDE06G0381 4 + View
Carpinus fangiana Cfa007913 Cfa03 + View
Cardamine hirsuta CARHR061080 Zinc finger protein, putative Chr2 - View
Carya illinoinensis CiPaw.06G018300 Chr06 + View
Carya illinoinensis CiPaw.03G062900 Chr03 - View
Citrullus lanatus ClCG05G022560 Zinc finger protein, putative CG_Chr05 + View
Citrullus lanatus ClCG01G005820 Zinc finger protein CG_Chr01 - View
Cucumis melo MELO3C005347.2 zinc finger protein 6-like chr09 + View
Cucumis melo MELO3C012263.2 zinc finger protein 6 chr10 + View
Carica papaya Cpa.g.sc65.48 supercontig_65 - View
Chenopodium quinoa AUR62037310 Protein of unknown function C_Quinoa_Scaffold_1229 + View
Capsella rubella Carub.0002s1486 scaffold_2 - View
Cucumis sativus L. CsaV3_5G028870 zinc finger protein 6-like chr5 + View
Cucumis sativus L. CsaV3_5G034460 zinc finger protein 6 chr5 - View
Daucus carota DCAR_026741 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_023643 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_007252 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_030172 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv21056 GWHABJS00000018 - View
Davidia involucrata Dinv31617 GWHABJS00000008 + View
Durio zibethinus Duzib251G0229 NW_019167971.1 + View
Erigeron canadensis ECA233G3732 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA234G2753 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.B03001 Chr02 + View
Erythranthe guttata Migut.L01046 scaffold_12 + View
Eutrema salsugineum Thhalv10019825m.g scaffold_9 + View
Fragaria x ananassa FAN12G3622 Fvb4-3 - View
Fragaria x ananassa FAN12G3428 Fvb4-3 - View
Fragaria x ananassa FAN17G2270 Fvb4-2 + View
Fragaria x ananassa FAN07G0180 Fvb4-4 - View
Fragaria x ananassa FAN22G1816 Fvb4-1 + View
Fragaria vesca FvH4_4g27020 Fvb4 + View
Glycine max Glyma.18G295500 Gm18 + View
Glycine max Glyma.10G272300 Gm10 + View
Glycine max Glyma.08G366900 Gm08 - View
Glycine max Glyma.20G117800 Gm20 - View
Helianthus annuus HanXRQChr17g0551971 Putative zinc finger, C2H2 HanXRQChr17 + View
Hydrangea macrophylla Hma1.2p1_1149F.1_g261770 Hma1.2p1_1149F.1 + View
Lupinus albus Lalb_Chr06g0165961 Lalb_Chr06 + View
Lupinus albus Lalb_Chr02g0145841 Lalb_Chr02 + View
Lotus japonicus Lj2g0023185 chr2 + View
Lotus japonicus Lj5g0023512 PF13912 - C2H2-type zinc finger (zf-C2H2_6) chr5 - View
Lonicera japonica Lj6P755T11 GWHAAZE00000006 + View
Lonicera japonica Lj3P1012T42 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_8_40320 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_3_57900 Lsat_1_v8_lg_3 + View
Magnolia biondii MBI16_g06601_MAGBIO AED:0.02 Chr16 + View
Malus domestica MD13G1039200 C2H2 and C2HC zinc fingers superfamily protein Chr13 + View
Malus domestica MD16G1040100 C2H2 and C2HC zinc fingers superfamily protein Chr16 + View
Manihot esculenta Manes.02G069800 Chromosome02 - View
Manihot esculenta Manes.06G066000 Chromosome06 + View
Manihot esculenta Manes.14G104900 Chromosome14 - View
Nelumbo nucifera Nn3g17902 chr3 - View
Nelumbo nucifera Nn4g23905 chr4 - View
Nicotiana tabacum Nitab4.5_0001616g0060 Zinc finger C2H2-type/integrase DNA-binding domain, Zinc finger, C2H2 Nitab4.5_0001616 + View
Olea europaea Oeu034222.1 chr8 + View
Olea europaea Oeu057738.1 chr6 - View
Petunia axillaris Peaxi162Scf00753g00021 zinc finger protein 6 Peaxi162Scf00753 + View
Punica granatum PGR119G1438 NC_045132.1 + View
Punica granatum PGR102G0206 NC_045129.1 + View
Prunus persica Prupe.3G143800 Pp03 - View
Prunus persica Prupe.1G314000 Pp01 - View
Pisum sativum Psat6g225800 Zinc finger C2H2 type domain profile. chr6LG2 + View
Papaver somniferum PSO017G0327 NC_039362.1 + View
Populus trichocarpa Potri.004G097900 Chr04 + View
Populus trichocarpa Potri.010G122400 Chr10 + View
Populus trichocarpa Potri.008G123100 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Chr08 - View
Populus trichocarpa Potri.017G116300 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Chr17 - View
Phaseolus vulgaris Phvul.007G029500 Chr07 - View
Quercus lobata QL01p040570 1 + View
Quercus lobata QL02p051021 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr4g0434821 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim09G0105500 chr09 + View
Striga asiatica SGA_v2.0_scaffold36G14545 scaffold36 - View
Striga asiatica SGA_v2.0_scaffold170G38784 scaffold170 - View
Salvia bowleyana SalBow8G0951 GWHASIU00000004 + View
Salvia bowleyana SalBow8G2676 GWHASIU00000004 + View
Salix brachista Sabra10G0092500 GWHAAZH00000010 + View
Salix brachista Sabra08G0093400 GWHAAZH00000008 - View
Salix brachista Sabra17G0096300 GWHAAZH00000017 - View
Simmondsia chinensis Sc11g0003530 GWHAASQ00000011 + View
Sechium edule Sed0012189 LG07 - View
Sechium edule Sed0002254 LG06 - View
Solanum lycopersicum Solyc05g009170.3 Zinc finger protein 8 (AHRD V3.3 *** A0A2G3B627_CAPCH) SL4.0ch05 + View
Schrenkiella parvula Sp5g23410 ch5-6 - View
Solanum pennellii Sopen05g004890 C2H2 and C2HC zinc fingers superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: zinc finger protein 6 Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400014553 Zinc finger protein ST4.03ch05 + View
Trochodendron aralioides TAR371G0938 group13 + View
Trochodendron aralioides TAR622G1380 group8 + View
Theobroma cacao Thecc.02G225300 Chromosome_2 + View
Theobroma cacao Thecc.04G132100 Zinc finger protein 6 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104821919 zinc finger protein 6 NW_010966617.1 - View
Tarenaya hassleriana THA.LOC104808327 zinc finger protein 6-like NW_010960187.1 + View
Trifolium pratense TPR.G4872 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI31G0261 NC_052233.1 + View
Tripterygium wilfordii TWI74G1378 NC_052234.1 - View
Tripterygium wilfordii TWI79G0479 NC_052238.1 + View
Vaccinium macrocarpon vmacro10576 Similar to GIS3: Zinc finger protein GIS3 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G2679 CM024071.1 + View
Vitis vinifera GSVIVG01011868001 chr1 - View
Vitis vinifera GSVIVG01031007001 chr14 + View