Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0038397 squalene epoxidase [Camellia oleifera] Chr1 - View
CSS0043853 squalene epoxidase 1 [Panax vietnamensis var. fuscidiscus] Chr4 + View
CSS0025875 squalene epoxidase [Camellia oleifera] Contig652 - View
CSS0037114 Squalene monooxygenase isoform 1 [Theobroma cacao] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G13980 LG-7 + View
Aethionema arabicum Aa31LG6G14640 LG-6 + View
Acer truncatum Atru.chr3.1067 chr3 + View
Acer truncatum Atru.chr13.878 chr13 - View
Actinidia chinensis Actinidia10230 Lachesis_group26 + View
Actinidia chinensis Actinidia36418 Lachesis_group4 - View
Actinidia chinensis Actinidia19287 Lachesis_group28 + View
Arabidopsis lyrata AL7G12920 scaffold_7 - View
Arabidopsis lyrata AL4G12410 scaffold_4 - View
Avicennia marina MSTRG.25015 ScioBoG_4119_HRSCAF_4138 - View
Amaranthus hybridus Ah.03g140740 Squalene epoxidase 1 (AtSQE1) (EC 1.14.14.17) (Protein DROUGHT HYPERSENSITIVE 2) (Squalene monooxygenase) (XF1 protein) AmaHy_arrow1_Scaffold_3 + View
Aquilegia oxysepala Aqoxy6G02965 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D0CGVG K00511 - squalene monooxygenase (SQLE, ERG1) arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT2G22830 squalene epoxidase 2 squalene epoxidase 2 (SQE2)%3B FUNCTIONS IN: squalene monooxygenase activity%2C electron carrier activity%2C oxidoreductase activity%2C FAD binding%3B INVOLVED IN: sterol biosynthetic process%3B LOCATED IN: integral to membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698)%2C Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal (InterPro:IPR003953)%3B BEST Arabidopsis thaliana protein match is: squalene epoxidase 3 (TAIR:AT4G37760.1)%3B Has 2838 Blast hits to 2834 proteins in 830 species: Archae - 46%3B Bacteria - 1617%3B Metazoa - 134%3B Fungi - 223%3B Plants - 197%3B Viruses - 0%3B Other Eukaryotes - 621 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G37760 squalene epoxidase 3 squalene epoxidase 3 (SQE3)%3B FUNCTIONS IN: squalene monooxygenase activity%3B INVOLVED IN: response to jasmonic acid stimulus%2C response to wounding%2C sterol biosynthetic process%3B LOCATED IN: endomembrane system%2C integral to membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698)%2C Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal (InterPro:IPR003953)%3B BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 (TAIR:AT2G22830.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0739G162 AmTr_v1.0_scaffold00065 + View
Brassica carinata BcaB06g27845 ChrB06 - View
Brassica carinata BcaC02g08591 ChrC02 + View
Brassica napus C01p01450 C01 - View
Brassica napus A01p01290 A01 - View
Brassica napus C04p52170 C04 - View
Brassica oleracea BolC1t00142H C1 - View
Brassica rapa BraA01t00126Z A01 - View
Brassica rapa BraA04t17365Z A04 - View
Beta vulgaris EL10Ac6g15589 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Chr6_EL10_PGA_scaffold0 - View
Beta vulgaris EL10Ac1g02341 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G416.5 PGAv.1.6.scaffold416 + View
Cicer arietinum L. Ca_06988_v3 Ca_LG3_v3 + View
Corylus avellana Haze_22373 Similar to SQE1: Squalene monooxygenase SE1 (Panax ginseng OX%3D4054) 3 - View
Corylus avellana Haze_03981 Similar to SQE2: Squalene monooxygenase SE2 (Panax ginseng OX%3D4054) 2 - View
Coffea canephora Cc02_g20360 Squalene monooxygenase chr2 - View
Coffea canephora Cc10_g07750 Squalene monooxygenase chr10 + View
Coffea canephora Cc07_g07420 Squalene monooxygenase chr7 + View
Citrus clementina Ciclev10025367m.g scaffold_7 + View
Citrus clementina Ciclev10000839m.g scaffold_5 - View
Ceratophyllum demersum CDE01G0503 11 + View
Ceratophyllum demersum CDE07G1285 5 + View
Carpinus fangiana Cfa013726 Cfa05 - View
Carpinus fangiana Cfa006776 Cfa02 + View
Cardamine hirsuta CARHR246150 Squalene monooxygenase, putative Chr7 + View
Cardamine hirsuta CARHR114130 Squalene monooxygenase, putative Chr4 - View
Carya illinoinensis CiPaw.07G036700 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Chr07 + View
Carya illinoinensis CiPaw.07G171100 1.14.99.7 - Transferred entry: 1.14.13.132 Chr07 - View
Carya illinoinensis CiPaw.08G053100 1.14.99.7 - Transferred entry: 1.14.13.132 Chr08 + View
Carya illinoinensis CiPaw.08G149500 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Chr08 - View
Citrullus lanatus ClCG08G016750 Squalene monooxygenase, putative CG_Chr08 + View
Cucumis melo MELO3C016845.2 squalene monooxygenase-like chr07 - View
Cucumis melo MELO3C010781.2 squalene monooxygenase-like chr03 + View
Corchorus olitorius COL.COLO4_11622 Aromatic-ring hydroxylase-like protein AWUE01014719.1 + View
Carica papaya Cpa.g.sc129.68 supercontig_129 - View
Carica papaya Cpa.g.sc160.28 supercontig_160 - View
Chenopodium quinoa AUR62004036 Squalene monooxygenase C_Quinoa_Scaffold_2370 + View
Chenopodium quinoa AUR62007545 Squalene monooxygenase C_Quinoa_Scaffold_2646 + View
Capsella rubella Carub.0004s0196 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase scaffold_4 - View
Capsella rubella Carub.0007s0249 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase scaffold_7 - View
Daucus carota DCAR_012827 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_010798 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv23051 GWHABJS00000021 + View
Davidia involucrata Dinv39199 GWHABJS00000011 - View
Davidia involucrata Dinv26964 GWHABJS00000014 + View
Davidia involucrata Dinv44925 GWHABJS00000002 - View
Durio zibethinus Duzib147G0138 NW_019168470.1 - View
Durio zibethinus Duzib116G0530 NW_019167949.1 + View
Durio zibethinus Duzib093G1756 NW_019167937.1 - View
Durio zibethinus Duzib041G0102 NW_019167826.1 + View
Erigeron canadensis ECA238G4260 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.F02215 Chr06 - View
Eucalyptus grandis Eucgr.I00669 Chr09 - View
Eucalyptus grandis Eucgr.F00103 Chr06 - View
Erythranthe guttata Migut.C00442 scaffold_3 - View
Eutrema salsugineum Thhalv10000099m.g 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase scaffold_15 - View
Fragaria x ananassa FAN24G3566 K00511 - squalene monooxygenase (SQLE, ERG1) Fvb2-2 + View
Fragaria x ananassa FAN26G0133 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Fvb1-2 + View
Fragaria x ananassa FAN23G0942 PF01494//PF08491 - FAD binding domain (FAD_binding_3) // Squalene epoxidase (SE) Fvb1-3 + View
Fragaria x ananassa FAN19G3225 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Fvb1-4 + View
Fragaria x ananassa FAN20G2793 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Fvb2-3 + View
Fragaria x ananassa FAN28G0055 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Fvb1-1 - View
Fragaria x ananassa FAN15G1577 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Fvb2-4 - View
Fragaria x ananassa FAN15G1654 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Fvb2-4 - View
Fragaria x ananassa FAN27G1958 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Fvb2-1 - View
Fragaria vesca FvH4_1g18300 K00511 - squalene monooxygenase (SQLE, ERG1) Fvb1 + View
Fragaria vesca FvH4_2g32500 K00511 - squalene monooxygenase (SQLE, ERG1) Fvb2 - View
Gossypium hirsutum Gohir.D11G211201 1.14.99.7 - Transferred entry: 1.14.13.132 D11 + View
Gossypium hirsutum Gohir.A06G026700 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 A06 + View
Gossypium hirsutum Gohir.D06G024000 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 D06 + View
Gossypium hirsutum Gohir.A05G212500 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 A05 + View
Gossypium hirsutum Gohir.A02G149400 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase A02 - View
Gossypium hirsutum Gohir.D05G215700 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 D05 + View
Gossypium hirsutum Gohir.A11G211700 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase A11 - View
Gossypium hirsutum Gohir.D03G030900 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase D03 + View
Glycine max Glyma.04G048200 1.14.99.7 - Transferred entry: 1.14.13.132 Gm04 + View
Glycine max Glyma.14G090400 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Gm14 + View
Glycine max Glyma.06G049500 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Gm06 + View
Gossypium raimondii Gorai.010G028500 Chr10 + View
Gossypium raimondii Gorai.009G222400 Chr09 + View
Gossypium raimondii Gorai.003G032500 Chr03 + View
Gossypium raimondii Gorai.007G226900 Chr07 + View
Helianthus annuus HanXRQChr14g0447731 Putative squalene epoxidase; FAD/NAD(P)-binding domain HanXRQChr14 - View
Lupinus albus Lalb_Chr14g0367991 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Lalb_Chr14 - View
Lotus japonicus Lj1g0019713 1.14.99.7 - Transferred entry: 1.14.13.132 chr1 - View
Lotus japonicus Lj6g0015048 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 chr6 - View
Lonicera japonica Lj2C423G4 GWHAAZE00000002 + View
Lonicera japonica Lj4C76T5 GWHAAZE00000004 + View
Lonicera japonica Lj4C751G2 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_2_80100 Lsat_1_v8_lg_2 - View
Magnolia biondii MBI16_g35727_MAGBIO AED:0.08 Chr16 - View
Magnolia biondii MBI16_g09818_MAGBIO AED:0.13 Chr16 + View
Malus domestica MD02G1190300 FAD/NAD(P)-binding oxidoreductase family protein Chr02 + View
Malus domestica MD15G1064100 FAD/NAD(P)-binding oxidoreductase family protein Chr15 - View
Malus domestica MD15G1301500 squalene epoxidase 3 Chr15 + View
Manihot esculenta Manes.13G108200 Chromosome13 - View
Manihot esculenta Manes.18G050300 Chromosome18 - View
Manihot esculenta Manes.05G184200 Chromosome05 - View
Manihot esculenta Manes.12G118000 Chromosome12 + View
Medicago truncatula Medtr3g103510 squalene epoxidase chr3 + View
Medicago truncatula Medtr1g017270 squalene monooxygenase chr1 - View
Nelumbo nucifera Nn6g34541 chr6 + View
Nicotiana tabacum Nitab4.5_0000036g0190 Aromatic-ring hydroxylase-like, FAD dependent oxidoreductase, Squalene epoxidase Nitab4.5_0000036 + View
Olea europaea Oeu014316.1 chr17 - View
Oryza sativa ssp. japonica Os03g0231700 Similar to squalene monooxygenase. Similar to Squalene monooxygenase 2 (EC 1.14.99.7). chr03 - View
Punica granatum PGR004G1108 NC_045131.1 + View
Prunus persica Prupe.6G216100 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Pp06 - View
Papaver somniferum PSO017G3435 NC_039362.1 - View
Papaver somniferum PSO675G8448 NC_039358.1 + View
Papaver somniferum PSO541G1952 NC_039363.1 - View
Populus trichocarpa Potri.007G007600 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Chr07 + View
Populus trichocarpa Potri.002G114500 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Chr02 + View
Quercus lobata QL06p038677 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0310151 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr2g0108881 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0090000 chr08 - View
Rhododendron simsii Rhsim06G0065400 chr06 - View
Salvia bowleyana SalBow7G4368 GWHASIU00000005 + View
Simmondsia chinensis Sc15g0005320 GWHAASQ00000015 - View
Solanum lycopersicum Solyc04g077440.4 Squalene epoxidase (AHRD V3.3 *** Q8GSM8_MEDTR) SL4.0ch04 - View
Schrenkiella parvula Sp7g35410 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase ch7-6 + View
Schrenkiella parvula Sp4g01850 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase ch4-1 - View
Solanum pennellii Sopen04g031030 Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase) (SE) - Panax ginseng (Korean ginseng), Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. | XF1 | FUNCTIONS IN: squalene monooxygenase activity | INVOLVED IN: response to water deprivation, sterol biosynthetic process | LOCATED IN: endomembrane system, integral to membrane | EXPRESSED IN: 29 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Squalene epoxidase | BEST Arabidopsis thaliana protein match is: squalene epoxidase 2 Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400004923 Squalene monooxygenase ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400003324 Squalene epoxidase ST4.03ch02 - View
Selenicereus undatus Hund16420 Scaffold_33677 + View
Selenicereus undatus Hund13967 Scaffold_33679 + View
Selenicereus undatus Hund05267 Scaffold_19641 - View
Trochodendron aralioides TAR625G1074 group4 + View
Trochodendron aralioides TAR376G1003 group14 - View
Trochodendron aralioides TAR381G1038 group11 + View
Trochodendron aralioides TAR628G1258 group5 - View
Theobroma cacao Thecc.08G083200 Squalene monooxygenase Chromosome_8 - View
Theobroma cacao Thecc.01G077200 Squalene monooxygenase Chromosome_1 + View
Tarenaya hassleriana THA.LOC104807642 squalene epoxidase 3 NW_010963495.1 + View
Trifolium pratense TPR.G30215 Tp57577_TGAC_v2_LG7 + View
Trifolium pratense TPR.G13046 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI12G1432 NC_052243.1 - View
Tripterygium wilfordii TWI56G0882 NC_052242.1 + View
Tripterygium wilfordii TWI74G0978 NC_052234.1 + View
Vaccinium macrocarpon vmacro18008 Similar to SQE2: Squalene monooxygenase SE2 (Panax ginseng OX%3D4054) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro21407 Similar to SQE2: Squalene monooxygenase SE2 (Panax ginseng OX%3D4054) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro04603 Similar to SQE1: Squalene monooxygenase SE1 (Panax ginseng OX%3D4054) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0076 CM024073.1 + View
Vigna mungo VMungo1309G3053 CM024072.1 - View
Vitis vinifera GSVIVG01009287001 chr18 - View
Zea mays Zm00001eb009510 Zm00001e000925 Squalene epoxidase 1 1 + View