Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001781 PREDICTED: uncharacterized protein LOC104611017 [Nelumbo nucifera] Chr2 + View
CSS0027373 hypothetical protein VITISV_005919 [Vitis vinifera] Chr4 - View
CSS0041759 hypothetical protein VITISV_009246 [Vitis vinifera] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1MTN21 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 - View
Brassica carinata BcaC09g48890 ChrC09 + View
Beta vulgaris EL10Ac6g15696 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Chr6_EL10_PGA_scaffold0 - View
Cicer arietinum L. Ca_13243_v3 Ca_LG4_v3 + View
Chenopodium quinoa AUR62010305 Retrovirus-related Pol polyprotein from transposon TNT 1-94 C_Quinoa_Scaffold_1257 - View
Erigeron canadensis ECA240G3724 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA247G1653 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA234G4218 Conyza_canadensis_scaffold:4 - View
Eutrema salsugineum Thhalv10022990m.g PTHR11439//PTHR11439:SF192 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED scaffold_11 - View
Fragaria vesca FvH4_2g04952 PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Fvb2 + View
Nelumbo nucifera Nn1g04683 chr1 + View
Punica granatum PGR102G0612 NC_045129.1 - View
Pisum sativum Psat4g083480 Unknown gene chr4LG4 - View
Quercus lobata QL11p034235 11 + View
Quercus lobata QL08p034924 8 + View
Quercus lobata QL09p045312 9 - View
Salix brachista Sabra07G0042600 GWHAAZH00000007 + View
Solanum pennellii Sopen01g049740 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400024980 Polyprotein ST4.03ch02 - View