Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0014593 unnamed protein product [Coffea canephora] Chr7 + View
CSS0041786 PREDICTED: uncharacterized protein LOC100244375 [Vitis vinifera] Chr12 - View
CSS0014713 PREDICTED: putative lysozyme-like protein [Vitis vinifera] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8070 LG-3 - View
Aethionema arabicum Aa31LG11G1340 LG-11 - View
Acer truncatum Atru.chr1.634 chr1 + View
Arabidopsis lyrata AL8G25870 scaffold_8 - View
Arabidopsis lyrata AL8G39080 scaffold_8 + View
Avicennia marina MSTRG.8802 ScioBoG_11560_HRSCAF_11609 + View
Amaranthus hybridus Ah.12g058110 AT-hook motif nuclear-localized protein 1 AmaHy_arrow1_Scaffold_12 + View
Amaranthus hybridus Ah.07g208260 AT-hook motif nuclear-localized protein 3 AmaHy_arrow1_Scaffold_7 - View
Aquilegia oxysepala Aqoxy7G00615 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KT6X0G PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M4KLL8 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT4G25320 AT hook motif DNA-binding family protein AT hook motif DNA-binding family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%3B BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT5G51590.1)%3B Has 750 Blast hits to 746 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 748%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G51590 AT hook motif DNA-binding family protein AT hook motif DNA-binding family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%3B BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G25320.1)%3B Has 1243 Blast hits to 1178 proteins in 110 species: Archae - 0%3B Bacteria - 11%3B Metazoa - 305%3B Fungi - 62%3B Plants - 787%3B Viruses - 15%3B Other Eukaryotes - 63 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G62260 AT hook motif DNA-binding family protein AT hook motif DNA-binding family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%3B BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G25320.1)%3B Has 865 Blast hits to 854 proteins in 59 species: Archae - 0%3B Bacteria - 11%3B Metazoa - 37%3B Fungi - 23%3B Plants - 764%3B Viruses - 14%3B Other Eukaryotes - 16 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB08g35511 ChrB08 - View
Brassica carinata BcaC04g20654 ChrC04 + View
Brassica carinata BcaC04g23421 ChrC04 - View
Brassica napus A01p16620 A01 + View
Brassica napus C03p64610 C03 - View
Brassica napus A10p09530 A10 - View
Brassica napus A09p07600 A09 + View
Brassica napus C09p40950 C09 - View
Brassica napus A06p28980 A06 + View
Brassica oleracea BolC3t18719H C3 - View
Brassica oleracea BolC9t53760H C9 + View
Brassica oleracea BolC9t56975H C9 - View
Brassica rapa BraA01t01617Z A01 + View
Brassica rapa BraA06t25843Z A06 + View
Brassica rapa BraA10t43028Z A10 - View
Beta vulgaris EL10Ac3g05794 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr3_EL10_PGA_scaffold7 + View
Beta vulgaris EL10Ac5g12636 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr5_EL10_PGA_scaffold2 - View
Beta vulgaris EL10Ac1g00895 PTHR31500:SF15 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Chr1_EL10_PGA_scaffold3 + View
Cicer arietinum L. Ca_09893_v3 Ca_LG4_v3 + View
Corylus avellana Haze_13821 Similar to AHL3: AT-hook motif nuclear-localized protein 3 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc02_g03900 Putative uncharacterized protein chr2 + View
Citrus clementina Ciclev10005312m.g scaffold_9 - View
Citrus clementina Ciclev10021116m.g scaffold_3 + View
Ceratophyllum demersum CDE09G0729 7 + View
Ceratophyllum demersum CDE04G0706 2 + View
Carpinus fangiana Cfa008234 Cfa03 + View
Carpinus fangiana Cfa012033 Cfa05 - View
Carpinus fangiana Cfa001714 Cfa01 + View
Cardamine hirsuta CARHR264390 AT hook motif DNA-binding family protein Chr8 - View
Cardamine hirsuta CARHR276040 AT hook motif DNA-binding protein Chr8 + View
Cardamine hirsuta CARHR232730 AT hook motif DNA-binding family protein Chr7 + View
Carya illinoinensis CiPaw.04G063600 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr04 + View
Carya illinoinensis CiPaw.11G146100 PTHR31500//PTHR31500:SF7 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr11 + View
Carya illinoinensis CiPaw.03G097300 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr03 + View
Citrullus lanatus ClCG05G007480 AT hook motif DNA-binding family protein LENGTH=404 CG_Chr05 - View
Cucumis melo MELO3C006833.2 AT-hook motif nuclear-localized protein 1 chr06 - View
Corchorus olitorius COL.COLO4_14180 hypothetical protein AWUE01015387.1 - View
Carica papaya Cpa.g.sc3.271 supercontig_3 + View
Carica papaya Cpa.g.sc29.71 supercontig_29 + View
Chenopodium quinoa AUR62004217 AHL1: AT-hook motif nuclear-localized protein 1 C_Quinoa_Scaffold_4250 + View
Chenopodium quinoa AUR62017374 AHL1: AT-hook motif nuclear-localized protein 1 C_Quinoa_Scaffold_3489 + View
Chenopodium quinoa AUR62013631 AHL1: AT-hook motif nuclear-localized protein 1 C_Quinoa_Scaffold_1412 - View
Capsella rubella Carub.0008s1163 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED scaffold_8 - View
Capsella rubella Carub.0008s2295 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_3G016340 AT-hook motif nuclear-localized protein 4 chr3 - View
Daucus carota DCAR_018125 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv43714 GWHABJS00000016 - View
Davidia involucrata Dinv32381 GWHABJS00000020 - View
Davidia involucrata Dinv28534 GWHABJS00000004 + View
Durio zibethinus Duzib084G0045 NW_019167827.1 + View
Durio zibethinus Duzib205G0980 NW_019168381.1 - View
Durio zibethinus Duzib068G1173 NW_019167838.1 + View
Durio zibethinus Duzib084G1034 NW_019167827.1 - View
Erigeron canadensis ECA232G4521 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA238G0001 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.E00486 Chr05 - View
Eucalyptus grandis Eucgr.A02876 Chr01 + View
Eucalyptus grandis Eucgr.K00146 Chr11 + View
Erythranthe guttata Migut.F00431 scaffold_6 + View
Eutrema salsugineum Thhalv10013637m.g PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10004345m.g PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED scaffold_6 - View
Fragaria x ananassa FAN03G1116 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-3 + View
Fragaria x ananassa FAN01G1569 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-4 + View
Fragaria x ananassa FAN06G4740 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-2 - View
Fragaria x ananassa FAN10G3143 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-1 - View
Fragaria x ananassa FAN04G0410 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb5-4 - View
Fragaria x ananassa FAN13G0741 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb5-2 - View
Fragaria x ananassa FAN06G1294 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-2 + View
Fragaria vesca FvH4_7g28180 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7 - View
Fragaria vesca FvH4_5g00860 PTHR31500//PTHR31500:SF7 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb5 - View
Gossypium hirsutum Gohir.D07G043550 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED D07 + View
Gossypium hirsutum Gohir.D12G264300 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED D12 + View
Gossypium hirsutum Gohir.A07G039366 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED A07 + View
Glycine max Glyma.20G212200 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Gm20 + View
Glycine max Glyma.16G204400 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Gm16 + View
Glycine max Glyma.09G153600 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Gm09 + View
Hydrangea macrophylla Hma1.2p1_0099F.1_g048920 Hma1.2p1_0099F.1 + View
Lupinus albus Lalb_Chr03g0033101 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Lalb_Chr03 + View
Lupinus albus Lalb_Chr19g0131311 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Lalb_Chr19 + View
Lotus japonicus Lj2g0016341 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED chr2 + View
Lotus japonicus Lj5g0027010 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED chr5 - View
Lonicera japonica Lj1A984T86 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_3_131960 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI12_g10750_MAGBIO AED:0.16 Chr12 - View
Magnolia biondii MBI04_g45971_MAGBIO AED:0.57 Chr04 - View
Malus domestica MD01G1185700 AT-hook motif nuclear-localized protein 1 Chr01 - View
Manihot esculenta Manes.06G138000 Chromosome06 - View
Manihot esculenta Manes.14G033100 Chromosome14 + View
Medicago truncatula Medtr5g011590 DNA-binding protein chr5 + View
Nicotiana tabacum Nitab4.5_0000072g0440 Domain of unknown function DUF296 Nitab4.5_0000072 - View
Olea europaea Oeu021726.1 chr12 - View
Olea europaea Oeu042584.1 chr12 - View
Punica granatum PGR042G2647 NC_045130.1 + View
Prunus persica Prupe.2G282300 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Pp02 - View
Prunus persica Prupe.2G146200 Pp02 - View
Papaver somniferum PSO478G0661 NC_039361.1 + View
Populus trichocarpa Potri.012G129500 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr12 - View
Phaseolus vulgaris Phvul.004G127200 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr04 + View
Phaseolus vulgaris Phvul.007G111600 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr07 - View
Quercus lobata QL12p039461 12 - View
Quercus lobata QL08p052292 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0375131 RcHm_v2.0_Chr1 - View
Salvia bowleyana SalBow4G1687 GWHASIU00000008 + View
Salvia bowleyana SalBow4G0559 GWHASIU00000008 + View
Salix brachista Sabra14G0049600 GWHAAZH00000014 - View
Salix brachista Sabra12G0097400 GWHAAZH00000012 - View
Salix brachista Sabra15G0144400 GWHAAZH00000015 - View
Simmondsia chinensis Sc25g0000180 GWHAASQ00000025 + View
Simmondsia chinensis Sc01g0009120 GWHAASQ00000001 + View
Sechium edule Sed0023341 LG13 - View
Sechium edule Sed0017302 LG07 + View
Sechium edule Sed0006928 LG05 - View
Schrenkiella parvula Sp2g25460 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED ch2-4 + View
Schrenkiella parvula Sp6g13830 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED ch6-6 - View
Schrenkiella parvula Sp7g23340 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED ch7-4 + View
Selenicereus undatus Hund04636 Scaffold_19641 - View
Selenicereus undatus Hund14665 Scaffold_33677 - View
Selenicereus undatus Hund17018 Scaffold_33675 + View
Trochodendron aralioides TAR374G1224 group12 - View
Theobroma cacao Thecc.03G263500 AT-hook motif nuclear-localized protein 1 Chromosome_3 - View
Theobroma cacao Thecc.03G161500 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104821396 AT-hook motif nuclear-localized protein 6 NW_010966459.1 + View
Tarenaya hassleriana THA.LOC104811510 AT-hook motif nuclear-localized protein 3 NW_010965372.1 + View
Trifolium pratense TPR.G16612 Tp57577_TGAC_v2_scaf_260 + View
Tripterygium wilfordii TWI23G1161 NC_052239.1 + View
Tripterygium wilfordii TWI39G0162 NC_052250.1 - View
Vaccinium macrocarpon vmacro09884 Similar to AHL1: AT-hook motif nuclear-localized protein 1 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G1702 CM024071.1 - View
Vigna mungo VMungo0464G1432 CM024077.1 + View
Vitis vinifera GSVIVG01018513001 chr16 - View