Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0002911 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Vitis vinifera] Contig655 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.2352 chr6 - View
Actinidia chinensis Actinidia36118 Lachesis_group4 - View
Avicennia marina MSTRG.15522 ScioBoG_19538_HRSCAF_19626 - View
Arabidopsis thaliana AT3G26540 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1)%3B Has 45842 Blast hits to 12891 proteins in 208 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 81%3B Fungi - 71%3B Plants - 45205%3B Viruses - 0%3B Other Eukaryotes - 485 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB02g07943 ChrB02 - View
Brassica oleracea BolC7t44278H C7 - View
Beta vulgaris EL10Ac9g22652 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr9_EL10_PGA_scaffold8 + View
Citrus clementina Ciclev10017927m.g scaffold_2 - View
Ceratophyllum demersum CDE06G1842 4 + View
Carpinus fangiana Cfa007395 Cfa03 + View
Cardamine hirsuta CARHR261600 Pentatricopeptide repeat-containing protein Chr8 - View
Cardamine hirsuta CARHR147520 Pentatricopeptide repeat-containing protein Chr5 - View
Carya illinoinensis CiPaw.11G019600 PTHR24015//PTHR24015:SF469 - FAMILY NOT NAMED // PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr11 + View
Carya illinoinensis CiPaw.04G027300 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr04 - View
Citrullus lanatus ClCG05G012660 Pentatricopeptide repeat-containing protein, putative CG_Chr05 + View
Carica papaya Cpa.g.sc108.49 supercontig_108 - View
Capsella rubella Carub.0005s0452 PF01535 - PPR repeat (PPR) scaffold_5 - View
Cucumis sativus L. CsaV3_1G001080 Pentatricopeptide repeat chr1 - View
Cucumis sativus L. CsaV3_3G027700 Pentatricopeptide repeat-containing protein chr3 - View
Durio zibethinus Duzib138G0079 NW_019167893.1 + View
Durio zibethinus Duzib147G0113 NW_019168470.1 - View
Erigeron canadensis ECA246G2863 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.J02229 Chr10 - View
Erythranthe guttata Migut.K01385 scaffold_11 - View
Eutrema salsugineum Thhalv10027641m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_14 - View
Fragaria x ananassa FAN05G2539 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-3 + View
Fragaria x ananassa FAN14G5268 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-1 + View
Fragaria vesca FvH4_6g51120 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6 - View
Gossypium hirsutum Gohir.D10G086600 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) D10 - View
Gossypium hirsutum Gohir.D07G228900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D07 - View
Gossypium hirsutum Gohir.D09G027700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D09 - View
Gossypium hirsutum Gohir.A09G028300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A09 - View
Gossypium hirsutum Gohir.A07G222200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A07 - View
Gossypium raimondii Gorai.006G032200 Chr06 - View
Gossypium raimondii Gorai.001G264000 Chr01 - View
Helianthus annuus HanXRQChr15g0475381 Putative tetratricopeptide-like helical domain HanXRQChr15 + View
Helianthus annuus HanXRQChr07g0198991 Probable tetratricopeptide repeat (TPR)-like superfamily protein HanXRQChr07 - View
Hydrangea macrophylla Hma1.2p1_1291F.1_g273605 Hma1.2p1_1291F.1 + View
Lotus japonicus Lj2g0015722 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) chr2 - View
Lotus japonicus Lj2g0025150 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) chr2 + View
Lactuca sativa Lsat_1_v5_gn_2_91381 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_2 + View
Malus domestica MD13G1104000 Tetratricopeptide repeat (TPR)-like superfamily protein Chr13 - View
Manihot esculenta Manes.17G114800 Chromosome17 - View
Nelumbo nucifera Nn4g22692 chr4 + View
Nicotiana tabacum Nitab4.5_0002682g0010 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0002682 - View
Petunia axillaris Peaxi162Scf00129g01341 Pentatricopeptide repeat-containing protein Peaxi162Scf00129 - View
Punica granatum PGR083G2185 NC_045133.1 - View
Punica granatum PGR083G1661 NC_045133.1 + View
Prunus persica Prupe.3G289100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp03 - View
Papaver somniferum PSO017G3478 NC_039362.1 - View
Quercus lobata QL02p074192 CM012294 - View
Rhododendron simsii Rhsim08G0177700 chr08 - View
Rhododendron simsii Rhsim08G0048600 chr08 + View
Rhododendron simsii Rhsim10G0018600 chr10 + View
Striga asiatica SGA_v2.0_scaffold30G12546 scaffold30 - View
Sechium edule Sed0005385 LG11 + View
Sechium edule Sed0005658 LG08 - View
Solanum lycopersicum Solyc02g086570.3 Pentatricopeptide repeat (AHRD V3.3 *** A0A200RAX6_9MAGN) SL4.0ch02 + View
Schrenkiella parvula Sp7g01310 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch7-1 - View
Solanum pennellii Sopen02g031310 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400000478 Pentatricopeptide repeat-containing protein ST4.03ch02 - View
Trochodendron aralioides TAR622G0401 group8 + View
Trochodendron aralioides TAR374G1168 group12 - View
Theobroma cacao Thecc.04G014800 Pentatricopeptide repeat superfamily protein Chromosome_4 - View
Tripterygium wilfordii TWI12G0145 NC_052243.1 + View