Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.2415 chr4 + View
Acer truncatum Atru.chr10.269 chr10 - View
Avicennia marina MSTRG.4048 ScioBoG_102837_HRSCAF_103074 - View
Arabidopsis thaliana AT3G22690 LOW protein: PPR containing-like protein CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881)%2C Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1)%3B Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2%3B Bacteria - 10%3B Metazoa - 107%3B Fungi - 167%3B Plants - 48594%3B Viruses - 0%3B Other Eukaryotes - 904 (source: NCBI BLink). INVOLVED IN: photosystem II assembly%2C regulation of chlorophyll biosynthetic process%2C photosystem I assembly%2C thylakoid membrane organization%2C RNA modification%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). Chr3 - View
Amborella trichopoda ATR0665G472 AmTr_v1.0_scaffold00002 - View
Brassica carinata BcaB06g26380 ChrB06 - View
Brassica carinata BcaC05g28027 ChrC05 + View
Brassica napus A05p26010 A05 + View
Brassica napus C05p40430 C05 + View
Brassica oleracea BolC5t32784H C5 + View
Brassica rapa BraA05t21486Z A05 + View
Capsicum annuum CAN.G1402.4 PGAv.1.6.scaffold1402 - View
Cicer arietinum L. Ca_22676_v3 Ca_LG7_v3 - View
Corylus avellana Haze_11186 Similar to PCMP-H42: Pentatricopeptide repeat-containing protein At4g13650 (Arabidopsis thaliana OX%3D3702) 9 - View
Citrus clementina Ciclev10003904m.g scaffold_5 - View
Citrus clementina Ciclev10006593m.g scaffold_9 - View
Ceratophyllum demersum CDE07G0539 5 + View
Carpinus fangiana Cfa008462 Cfa03 + View
Cardamine hirsuta CARHR098570 Pentatricopeptide repeat-containing protein Chr3 - View
Carya illinoinensis CiPaw.01G197600 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr01 + View
Citrullus lanatus ClCG05G004980 Pentatricopeptide repeat-containing family protein CG_Chr05 + View
Cucumis melo MELO3C006512.2 Pentatricopeptide repeat-containing family protein chr06 + View
Corchorus olitorius COL.COLO4_21527 hypothetical protein AWUE01017684.1 - View
Capsella rubella Carub.0003s2285 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_3 - View
Davidia involucrata Dinv44544 GWHABJS00000014 - View
Eucalyptus grandis Eucgr.B01053 Chr02 + View
Eucalyptus grandis Eucgr.H03456 Chr08 + View
Erythranthe guttata Migut.G00366 scaffold_7 - View
Eutrema salsugineum Thhalv10020066m.g PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_13 + View
Fragaria vesca FvH4_4g00986 PF01535 - PPR repeat (PPR) Fvb4 - View
Gossypium hirsutum Gohir.A10G118300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A10 + View
Lupinus albus Lalb_Chr16g0376441 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr16 + View
Magnolia biondii MBI11_g32999_MAGBIO AED:0.25 Chr11 - View
Malus domestica MD16G1195000 Pentatricopeptide repeat (PPR) superfamily protein Chr16 - View
Manihot esculenta Manes.15G029500 Chromosome15 - View
Medicago truncatula Medtr7g095380 PPR repeat protein chr7 - View
Nelumbo nucifera Nn6g34129 chr6 - View
Nicotiana tabacum Nitab4.5_0000085g0340 Pentatricopeptide repeat Nitab4.5_0000085 + View
Olea europaea Oeu043473.1 chr20 - View
Petunia axillaris Peaxi162Scf00092g00003 Pentatricopeptide repeat-containing protein Peaxi162Scf00092 + View
Punica granatum PGR142G2842 NC_045128.1 - View
Punica granatum PGR119G0445 NC_045132.1 + View
Prunus persica Prupe.1G018800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 - View
Populus trichocarpa Potri.010G083700 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 + View
Quercus lobata QL06p001562 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0415871 RcHm_v2.0_Chr4 - View
Striga asiatica SGA_v2.0_scaffold138G35318 scaffold138 + View
Striga asiatica SGA_v2.0_scaffold79G25585 scaffold79 - View
Salvia bowleyana SalBow2G0389 GWHASIU00000007 + View
Sechium edule Sed0012658 LG02 - View
Schrenkiella parvula Sp3g20450 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch3-1 - View
Schrenkiella parvula Sp1g04560 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) ch1-1 + View
Trochodendron aralioides TAR365G0450 group16 + View
Theobroma cacao Thecc.04G233000 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_4 - View
Trifolium pratense TPR.G37999 Tp57577_TGAC_v2_LG2 - View
Vanilla planifolia HPP92_026616 Pentatricopeptide repeat-containing-like protein *** JADCNL010000078.1 - View