Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049542 PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G16340 LG-4 + View
Actinidia chinensis Actinidia34999 Lachesis_group2 - View
Actinidia chinensis Actinidia04887 Lachesis_group1 + View
Actinidia chinensis Actinidia37627 Lachesis_group13 + View
Arabidopsis lyrata AL1G26140 scaffold_1 + View
Arabidopsis lyrata AL5G12580 scaffold_5 - View
Arabidopsis lyrata AL5G26790 scaffold_5 + View
Avicennia marina MSTRG.700 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.7800 ScioBoG_102841_HRSCAF_103114 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6EG4FQ PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WI5JT9 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G14260 RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G02960.3)%3B Has 1793 Blast hits to 1789 proteins in 214 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 745%3B Fungi - 130%3B Plants - 638%3B Viruses - 54%3B Other Eukaryotes - 226 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G47550 RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to salt stress%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1)%3B Has 1858 Blast hits to 1855 proteins in 210 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 851%3B Fungi - 126%3B Plants - 608%3B Viruses - 31%3B Other Eukaryotes - 242 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to salt stress%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G62460.1)%3B Has 1874 Blast hits to 1869 proteins in 210 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 852%3B Fungi - 126%3B Plants - 623%3B Viruses - 31%3B Other Eukaryotes - 242 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC05g25319 ChrC05 + View
Brassica carinata BcaC01g01806 ChrC01 - View
Brassica carinata BcaB01g00908 ChrB01 - View
Brassica napus C05p12010 C05 + View
Brassica napus A06p10230 A06 + View
Brassica napus C03p71730 C03 + View
Brassica oleracea BolC5t29956H C5 + View
Brassica rapa BraA06t24206Z A06 + View
Capsicum annuum CAN.G837.19 PGAv.1.6.scaffold837 - View
Capsicum annuum CAN.G628.3 PGAv.1.6.scaffold628 + View
Corylus avellana Haze_07325 Protein of unknown function 4 + View
Coffea canephora Cc11_g13000 RING/FYVE/PHD zinc finger superfamily protein chr11 + View
Citrus clementina Ciclev10032323m.g scaffold_4 - View
Carpinus fangiana Cfa018941 Cfa08 + View
Cardamine hirsuta CARHR014680 E3 ubiquitin-protein ligase MARCH3 Chr1 + View
Cardamine hirsuta CARHR156180 RING/FYVE/PHD zinc finger superfamily protein Chr5 + View
Carya illinoinensis CiPaw.12G013200 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr12 + View
Carya illinoinensis CiPaw.06G085200 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr06 - View
Citrullus lanatus ClCG05G024280 RING/FYVE/PHD zinc finger superfamily protein LENGTH=288 CG_Chr05 + View
Chenopodium quinoa AUR62008419 SUD1: Probable E3 ubiquitin ligase SUD1 C_Quinoa_Scaffold_3422 - View
Chenopodium quinoa AUR62021676 SUD1: Probable E3 ubiquitin ligase SUD1 C_Quinoa_Scaffold_1675 + View
Chenopodium quinoa AUR62005790 march4: E3 ubiquitin-protein ligase MARCH4 C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0001s1394 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_1 + View
Capsella rubella Carub.0005s1363 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_5 + View
Daucus carota DCAR_027415 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_031023 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_007152 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_016557 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv19963 GWHABJS00000006 + View
Davidia involucrata Dinv38713 GWHABJS00000019 + View
Durio zibethinus Duzib084G0238 NW_019167827.1 - View
Durio zibethinus Duzib248G1097 NW_019168048.1 - View
Durio zibethinus Duzib147G1486 NW_019168470.1 + View
Durio zibethinus Duzib251G0706 NW_019167971.1 + View
Durio zibethinus Duzib205G1270 NW_019168381.1 - View
Durio zibethinus Duzib268G1471 NW_019168270.1 + View
Eucalyptus grandis Eucgr.B00505 Chr02 - View
Erythranthe guttata Migut.L01292 scaffold_12 + View
Eutrema salsugineum Thhalv10010967m.g PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_16 - View
Eutrema salsugineum Thhalv10004698m.g PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_6 + View
Fragaria x ananassa FAN12G1916 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4-3 - View
Fragaria x ananassa FAN22G0695 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN08G3388 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN13G2712 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5-2 + View
Fragaria x ananassa FAN18G2626 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5-1 + View
Fragaria x ananassa FAN17G1748 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4-2 - View
Fragaria vesca FvH4_4g31340 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4 + View
Fragaria vesca FvH4_5g14930 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5 + View
Gossypium hirsutum Gohir.A13G074700 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A13 - View
Gossypium hirsutum Gohir.A12G165000 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A12 + View
Gossypium hirsutum Gohir.A12G177600 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A12 - View
Gossypium hirsutum Gohir.A11G031241 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A11 - View
Gossypium hirsutum Gohir.D11G034600 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED D11 - View
Gossypium hirsutum Gohir.D12G168100 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.D12G180000 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED D12 - View
Gossypium hirsutum Gohir.D13G074900 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED D13 - View
Glycine max Glyma.04G169300 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Gm04 + View
Glycine max Glyma.06G194100 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Gm06 - View
Glycine max Glyma.01G047700 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Gm01 + View
Gossypium raimondii Gorai.005G141600 Chr05 - View
Gossypium raimondii Gorai.007G037500 Chr07 - View
Gossypium raimondii Gorai.013G085600 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0265F.1_g106790 Hma1.2p1_0265F.1 - View
Hydrangea macrophylla Hma1.2p1_0795F.1_g218840 Hma1.2p1_0795F.1 - View
Lupinus albus Lalb_Chr10g0098281 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Lalb_Chr10 - View
Lotus japonicus Lj1g0012133 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED chr1 - View
Lonicera japonica Lj6C787T8 GWHAAZE00000006 + View
Lonicera japonica Lj5A110G120 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_9820 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_5_19621 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 + View
Malus domestica MD16G1072700 RING/FYVE/PHD zinc finger superfamily protein Chr16 + View
Malus domestica MD09G1051400 RING/FYVE/PHD zinc finger superfamily protein Chr09 - View
Malus domestica MD14G1200500 RING/FYVE/PHD zinc finger superfamily protein Chr14 - View
Malus domestica MD13G1072100 RING/FYVE/PHD zinc finger superfamily protein Chr13 + View
Malus domestica MD06G1193400 RING/FYVE/PHD zinc finger superfamily protein Chr06 - View
Manihot esculenta Manes.14G078200 Chromosome14 - View
Manihot esculenta Manes.06G092200 Chromosome06 + View
Olea europaea Oeu047296.2 chr10 + View
Petunia axillaris Peaxi162Scf00274g00626 Unknown protein Peaxi162Scf00274 + View
Punica granatum PGR083G0801 NC_045133.1 - View
Prunus persica Prupe.5G193700 Pp05 - View
Papaver somniferum PSO017G2728 NC_039362.1 - View
Phaseolus vulgaris Phvul.002G085200 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr02 + View
Rosa chinensis RcHm_v2.0_Chr4g0439841 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0156200 chr12 + View
Rhododendron simsii Rhsim08G0154800 chr08 + View
Simmondsia chinensis Sc04g0002650 GWHAASQ00000004 - View
Sechium edule Sed0020702 LG06 + View
Schrenkiella parvula Sp2g14000 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED ch2-4 - View
Schrenkiella parvula Sp1g12610 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED ch1-1 + View
Schrenkiella parvula Sp5g14330 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED ch5-1 - View
Solanum pennellii Sopen06g027070 RING/FYVE/PHD zinc finger superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to salt stress | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 , Zinc finger, C3HC4 RING-type , Zinc finger, RING-CH-type | BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400019512 Membrane associated ring finger 1,8 ST4.03ch03 + View
Trochodendron aralioides TAR371G1289 group13 - View
Trochodendron aralioides TAR629G1384 group0 + View
Theobroma cacao Thecc.03G087700 RING/FYVE/PHD zinc finger superfamily protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104822125 uncharacterized protein LOC104822125 NW_010966617.1 - View
Tripterygium wilfordii TWI60G0555 NC_052246.1 + View
Vaccinium macrocarpon vmacro16546 Similar to SUD1: Probable E3 ubiquitin ligase SUD1 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro17541 Similar to SUD1: Probable E3 ubiquitin ligase SUD1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01008001001 chr17 - View